LOC110527752 (LOC106582721)


Basic Information

Item Value
gene id LOC110527752
gene name LOC106582721
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 40473766 ~ 40481140 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021609249.2
GATGGGAGGTGGTGGTGCTGCAGACTGCTGCAAAGAGAACGAGGCCCCTCCCTTGTTTCAGAGAGAGCCTCTCTCCAAGAGTGAGAGCaagtgaggaggaggatgagtggaggagagaagCAGGGGATCAgcttgtcagtcagtcagtgtggagCTAGAAGAGGACGCTGGACATTCATCTCCCCAGATGCTCTAATTGACATAGGGCCCACTCAATCAATGCCAGATCAGCGACAACCCACGCTTCTCTCAACAGCAGCAACTCAGAGGGAACACGTAGAATGGAGGAGGACACAATGAAATTAGTTGAATCCATAGGACCAATTGAAGAAAAACCTCTTAAACCATTTCCATTCTGAGGCAAGGCAAAGGGAGATCTGAGgacttttaaaatgttttccttTCCCGGTATCCAGCCACGGGAGCATGTGGACATGATTTACATCTCCATGGAGACAGCCATCGCCCTGGCCTCTGTGCTGGGAAACGtgctggtggtgctggtggtTTGTGTTAACCGCGCCCTGAGAGACACCACGTTCTGCTTCATCGTGTCTCTAGCGGTGGCCGACATCGCTGTGGGAGCCCTGGTCATTCCCCTGGCTATAGTGATTAGTCTGGGGCTGAAGACTCAATTCTACACCTGCCTCTTCCTCGCCTGTCTGCTCCTCATCATCACCCAGGGTTCCATCCTTTCTCTAATGGCCATCGCCATTGACCGCTACCTCCGGGTCAAGATTCCCATCAAGTACAGCATCATCGTGACCCAGAACAGGGCATGGGTGGCAGTGTTCCTGTGCTGGCTCCTCTCTGCCCTGACCGGGCTGGTGCCAATGTTGGGCTGGCACAACGAGCACACACACGGTAACCTCAGCACCACCAGTGATGACATAATAGTTTGCACATTTACCACGGTCATGCGCATGGACTACATGGTCTACTTCAACTTCTTCGGCTGGGTGGTGGTTCCTCTGACCATCATGATCGCGCTGTACGCTGAGATCTTCAGGGTGATCCGGAAGCAGCTCAACATGCGTGCAGAGGCCACTTGCGACACCAGCAAGTACTTGCACAAGGAGCTAAAATTAGCCAAGTCCCTGGCGCTCGTCGTCTTGCTATTCGCTCTATGCTGGTTGCCCCTGCATGTCATGAACTGCATCCTCTTCTTCTGCCCGGAGTGTGGGATGCCCAAGAGCGCCATGTACATGGGCATCTTTATGTCCCATGTCAACTCTGCCCTCAATCCGCTGGTCTATGCCTTCCGGATACAGCGGTTCCGCGCCACGCTAGTCCAGATCGCCCGCCGCTGCATGCTGTGTAAACACAAGGAGACCAGCCCCTGCCCCAACCAGCCCAGCCCGCCACCCCTGTCTGATAAATCTCCAGTCCACCCTTAGCCAGGACCTTCATTGTTTCTATGCTTTTCCTGCGGAATAGTTGCGTTAAAGAAGTAGCCATAGTGCAATGAGGAGGAAACTTGTGTTACGCAACCGTTGTGAGAGACATCTGGGATGAAGGAAACAGTACGTGGACGCCCCCAATTACTGGAATGAACTCCAACAAAGAGCACTTCACTGAATTATGGAAACGAAATGAATTTACAATTGATATAGGCCCCACCTGGGAAAGACAATCCAGGAAAAAGGAAGACTTTAAATAAGAATTAGCCCAGCCCATATCTGTAATTTCACTCACTGATGCCAGCTGCAATGCATATTGAATAATTTGCTGTATATCGAGATCCTTGTCAAATTGGCCTGTAACACACTCATCCTCTTTCAGCTTTAGTGCCAAGCTAGTGGCATGTGTATGGGTGGGGTGCTGTTATCTTGCCAACTGTTTTGGCAAATGGCGTTGGAACAAAAAGAACAATTTACAAGAGTTGGTTCAGTACTACTGTAAAATCCCATGCTTTCCCAGGAAGATGACTCAATATGCCTATATCTGTTTTACAGTCAAGCTATTGTCCATCACGGTCCACAAAGGAAATGTAAATCAAGACAATTCTCTGTAAACCAAGCTCCACAGATTATTCTAAAGAAGAACGCTGTTTTCAGGTGAACAGGTTCAACAATGCTTTGTTTGAGAAGAATGATCTGTAGTATTTTCTCCTGAGCTTGGTTGTGCCATAATTTTTATAACACTGACAGGGTGTTGGAAAAGGCTCCAGGCATCTGAGTGAGCCCGATTTAAATCTAGAGTGAATTAATTACATGCAGTACATTATGGCTGTGTGATTTATACAACCCTGGAAAACCTTCATGCAAGCCTTTGTCAGTTCTGCTTCCTCATCAACTTGACCCTCACAAGGCACTTCTGTATAACTGATACACATAGGGGTAGGTGGTTGGAAAGAGAGTATGGGGATATTGCATTTGCATTCAAAGTTAATAAATAATCACATCCTACTAATTACACACTAGCTAAATTGCTTGACAATCTGCATCATCAGCATTGTTTTATATGGCTATCGGAGTACGGGATTTTTTGAGATTCTGATATTACCTCCAAATGTTTCCTAAATGTAGAGATACTGAAAGCATGCACTGTCCTTGTTTATGATGTACTTCGACATCATCTTTATCACAAAGTACAAATACATCTCTGACTGAGGAGCACGCAAAATGTGGGTTCAACAATGGGCAACCCACCACTTGGCAAAGCACGCCGCAGAAACCAATCAATCCTGAGCCCAAAGGGGGTTAACACCTGACCCCAGAGAGTGAAGCGGTGGACTCAAATAAAGAGAGGGCTCAGATCCTGCATGGATCTGTTAGAAATAGCTGTTAGAAATGGACAGTCCACACAGACAAATTACTTCATGACAGGACATGGGAGAGGTGACATTGAGGCAAGGGCTTGTGCAATTTGCTCCTGTCACTCATGTTGTCGGTGAAAGAGGAGACTGACCTGATTGACAAAAGCCAATTTTCCATGtttagttcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaaaatacaagTATTCAGAAGGGACACTCTAGCAGTATTGATGCTGTAAAATTATAATCACCAGACACTTTGCATTACTCTTTAGTTTTGTGAATGTTGAAATCTTGAAATCCCGAGAGGATTTAGGGTGATGTGATTCATAGAATCCCCCAATGGAGGACGTCTTAAAGAACTGTCGCAGGAAGACCAACCAGGAGAAGAGTACCTACTGCATGGACCGTTGCTTTCTTGTCTTTGTCATCTTCTTCCTCTTTGTGCTGTTTGGGAACGTGGTGGGAGTCAAACGAGCATAAGCTTAAGCCGTTTATGATCGACTTTGCCACATACCTGTTCGCCCAggatgaaggggaagagatgaTTGAACTGTATGCCTATTGGACAGTATAACATCCTCATGATTACCTGAGGATCACCACACCAGACGTTGTGATTTGTCAGTAGGCCACTTTGCTTTGACAGAAATATTTGAAATGTGATTAATTGTTGTCTGTTTGGAAATCCTGTTTTTGTTTGTAACTGACGTGTGCATGGAAATCCATTAGATGTACTCTGAATAATCATCTAAACTCCAATATGGTCAATTACTCAATAAACTAAACTGTGTAATTAAAGTGTGCTCGCTGAAAGCCAAACACAACTTTAGAAATAGTTCATAATTCTTCTCCCTCTGCCACCTCTAGCGGCAAAACCATAAAAGCTACCAACACAACTGTAAAGGTGAATTGCCACTTAGAACCAACTTCTCTGGTTTTAAACAGCTTATGTCGCAtagatatgagtcagaaacattaattgtagtgtcaaaattgactaccaACTCTAAATTGGATCATTtt

Function

NR:

description
adenosine receptor A1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021609249.2 True 3844 mRNA 0.46 2 40473766 40481140

Neighbor

gene id symbol gene type direction distance location
LOC110527751 NA coding upstream 16024 40438879 ~ 40457742 (+)
tnnt2b LOC106582714 coding upstream 159319 40305122 ~ 40314447 (+)
tnni1b LOC100462680 coding upstream 177587 40292040 ~ 40296179 (+)
csrp1b LOC106582712 coding upstream 186363 40283553 ~ 40287403 (+)
LOC110527739 LOC106582710 coding upstream 446308 39992766 ~ 40027458 (+)
LOC110527753 NA coding downstream 12513 40493653 ~ 40506453 (+)
ngfb LOC106582728 coding downstream 201866 40683006 ~ 40707849 (+)
tspan2a LOC106582727 coding downstream 234787 40715927 ~ 40733584 (+)
LOC110527761 LOC106582730 coding downstream 287139 40768279 ~ 40778071 (+)
si:ch211-105j21.9 LOC106582731 coding downstream 297602 40778742 ~ 40783217 (+)
G606662 NA non-coding upstream 23936 40449456 ~ 40449830 (+)
G606708 NA non-coding upstream 40245 40433273 ~ 40433521 (+)
G606705 NA non-coding upstream 43864 40429617 ~ 40429902 (+)
G606700 NA non-coding upstream 56697 40414740 ~ 40417069 (+)
G606670 NA non-coding upstream 113250 40358825 ~ 40360516 (+)
G606730 NA non-coding downstream 339 40481479 ~ 40481775 (+)
G606732 NA non-coding downstream 4732 40485872 ~ 40486080 (+)
G606734 NA non-coding downstream 6299 40487439 ~ 40487693 (+)
G606736 NA non-coding downstream 6895 40488035 ~ 40488271 (+)
G606737 NA non-coding downstream 8354 40489494 ~ 40489852 (+)
G606469 NA other upstream 242541 40230885 ~ 40231225 (+)
G606464 LOC106582711 other upstream 249595 40223027 ~ 40224171 (+)
G606452 LOC106582711 other upstream 266869 40206569 ~ 40206897 (+)
G606400 LOC105027254 other upstream 339316 40126534 ~ 40141972 (+)
G606977 NA other downstream 153041 40634181 ~ 40634439 (+)
G607904 NA other downstream 981684 41462824 ~ 41463169 (+)
G608390 LOC106582745 other downstream 1346071 41827211 ~ 41830808 (+)
G609436 NA other downstream 2339816 42820956 ~ 42821245 (+)
G610436 NA other downstream 2929251 43410391 ~ 43410806 (+)

Expression


Co-expression Network