slc16a1a (LOC106582732)


Basic Information

Item Value
gene id slc16a1a
gene name LOC106582732
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 40804053 ~ 40816448 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021609262.2
TCAAACAACCAATAAGAGGCTGGCTGGACTGACCTCACCAGTTCGCACTCTAGTGCCTTGGCCGGCCCAGCTGTTTGATCTGGCCACTGAATGAACCAAACTTTTGTCCACTTCCCTTCCACTTCACAGACTAGCCCTTATGCTGACTCTGAAGTATTAATTATAGTTTGGGACTGTCTCTCAGACTTTCTGGACCAGACTTCTGCAGAGGTCTCTGCTTCTTCCACAGATCCACTTAGGATATAGTACAGTATGCAGTCTGTCCTGCGCTGAAGTGCCTCGGTGAGAGCTCCCCATCTCAGCCTGCAGAGCTCATCTGGATTTAGAAAGATCTGCTGGCAAGGTGCCCATTGCTGTGTAGGGTCCTGTGCAGAGGAGCTTGGTGAGCAGCAGCCATGCCGCCTGCCACTGGAGGACCCCAGGGGTACACCCCTCCAGaggggggctggggctgggcggTGGTGGTGGGAGCCTTCATCTCCATCGGCTTCTCCTTTGCCTTTCCCAAGTCCATCACTGTCTTCTTCAAGGAGATCGAGGTCATCTTCGACTGCTCCAGCAGCCAGGTGTCCTGGATCTCCTCCATCATGCTGGCAGTCATGTACGCAGGAGgTCCTATCAGCAGTATCCTGGTTAATAAGTATGGGAGTCGTCCAGTCATGATGTGTGGAGGATTACTGTCTGGGTGTGGACTGATATCTGCCTCCTTCTGTAACTCAGTGGAAGGACTGTACTTCTGTGTGGGAGTGGTCGGAGGCTTGGGACTGGCATTCAATCTGAACCCAGCCCTTACTATGATTGGGAAGTACTTCTACCATAAGCGGCCCATCGCCAATGGAATCGCCATGGCAGGCAGCCCGGTGTTCCTGTCCACCCTGGCCCCTCTCAACAGTTGGTTATTTGACCAGTTTGGCTGGAGGGGCAGCTTCCTGATCCTGGGAGGCCTGCTGTTCAACTGCTGCGTGGCTGGCTCTCTCATGAGACCCATCGAAACCAAACCACAGTCTTCCTTGAAAAGTGAAGATGTTGCCAAAGAGAGTATGACATGTGGGCAGAAGTGCAACACTTTTATTGACCTCTCGCTGTTCAAACACCGGGGCTTCGTGCTCTACCTCATGGGTAACGTCATCATGTTCTTTGGTCTCTTCTCCCCACTGGTGTTCCTTAGTAACTTCGCCAAGAGCAGGGACATCCCCAAAGAGAAGGCAGCCTTCCTGCTGTCTATTCTGGCCTTTGTGGACATGGTGGCCCGGCCCTCCATGGGCATTGTGGCCAATACCAAGTGGATACGACCCAGGGTGCAGTACTTCTTTGCCTGCTCTGTGCTATTGAATGGCGTGTGCCACATCCTGGCCCCCATCTCCGTGGACTACACAGGCTTTGTTATCTACGCCATCATCTTTGGCTTTGCCTTCGGCTGGCTGAGTGCGGTGCTGTTTGAGACGCTCATGGACCTGGTGGGAACGCAGCGCTTCTCCAGTGCAGTGGGACTGGTCACCATCGTGGAGTGTGGGCCTGTCTTGTTAGGACCCCCTTTACTAGGTAAATTCAAAGACATTTACAACGACTACCAATACACCTACCAGAGCTGTGGGGTGATCCTTATTATTGCCAGTGTGTTCCTGTTCGTGGGGATGGGTATCAACTACCGGTTGTTGCACAaagagaaaaaggaggaggaaaggaaggctAATCCGGAGGGAAAAGAAGAAGAGTCCAACAAGGACAATGCTGCCAAAGAAGCCAGCAACGACAGGTTGAGAGCATTTGATGAGGCAAAAACTGCGGAAGACACAGTCTAACTCTCATTACCGTGTGAATGTGTGAATTTGATGTCGTCGCAATACAGTCAATTAAGATAATGTAGACATCAAATTCATTCAGTTCAAGTCCTTGCCATCTAGCAGATTTCATGTAAAGATAATTCTCAGCCCCATTTCCACTTCTGTCATTGAATAATGTATTATTAGTATAATATGACAGGAGCAAGATACACTTGTGTATGATATAGGCATGCAATCTCTACTGACATGTACTGCCACCCTGCAAAAATATACTCTATGTTATCAATCTGGACTCCAGATGGTCCATTTTCTGCATAAGTGTTGTGATATATTTTTGAATATTATTAGATACAGGTCATTTGTTTATACTGTGTTTGGAATTTCATAAATGCACTTTCTATAACTGCAATTTATTATTCTGTGAAAAAAAATGGAACTGCTATAACTTTTAGAACCTTTAATAAATCACTGTAACATTTTG
>XM_021609263.2
TCAAACAACCAATAAGAGGCTGGCTGGACTGACCTCACCAGTTCGCACTCTAGTGCCTTGGCCGGCCCAGCTGTTTGATCTGGCCACTGAATGAACCAAACTTTTGTCCACTTCCCTTCCACTTCACAGACTAGCCCTTATGCTGACTCTGAAGTATTAATTATAGTTTGGGACTGTCTCTCAGACTTTCTGGACCAGACTTCTGCAGAGGTCTCTGCTTCTTCCACAGATCCACTTAGGATATAGTACAGTATGCAGTCTGTCCTGCGCTGAAGTGCCTCGGTGAGAGCTCCCCATCTCAGCCTGCAGAGCTCATCTGGATTTAGAAAGATCTGCTGGCAAGGTGCCCATTGCTGTGTAGGGTCCTGTGCAGAGGAGCTTGGTGAGCAGCAGCCATGCCGCCTGCCACTGGAGGACCCCAGGGGTACACCCCTCCAGaggggggctggggctgggcggTGGTGGTGGGAGCCTTCATCTCCATCGGCTTCTCCTTTGCCTTTCCCAAGTCCATCACTGTCTTCTTCAAGGAGATCGAGGTCATCTTCGACTGCTCCAGCAGCCAGGTGTCCTGGATCTCCTCCATCATGCTGGCAGTCATGTACGCAGGAGGCTTGGGACTGGCATTCAATCTGAACCCAGCCCTTACTATGATTGGGAAGTACTTCTACCATAAGCGGCCCATCGCCAATGGAATCGCCATGGCAGGCAGCCCGGTGTTCCTGTCCACCCTGGCCCCTCTCAACAGTTGGTTATTTGACCAGTTTGGCTGGAGGGGCAGCTTCCTGATCCTGGGAGGCCTGCTGTTCAACTGCTGCGTGGCTGGCTCTCTCATGAGACCCATCGAAACCAAACCACAGTCTTCCTTGAAAAGTGAAGATGTTGCCAAAGAGAGTATGACATGTGGGCAGAAGTGCAACACTTTTATTGACCTCTCGCTGTTCAAACACCGGGGCTTCGTGCTCTACCTCATGGGTAACGTCATCATGTTCTTTGGTCTCTTCTCCCCACTGGTGTTCCTTAGTAACTTCGCCAAGAGCAGGGACATCCCCAAAGAGAAGGCAGCCTTCCTGCTGTCTATTCTGGCCTTTGTGGACATGGTGGCCCGGCCCTCCATGGGCATTGTGGCCAATACCAAGTGGATACGACCCAGGGTGCAGTACTTCTTTGCCTGCTCTGTGCTATTGAATGGCGTGTGCCACATCCTGGCCCCCATCTCCGTGGACTACACAGGCTTTGTTATCTACGCCATCATCTTTGGCTTTGCCTTCGGCTGGCTGAGTGCGGTGCTGTTTGAGACGCTCATGGACCTGGTGGGAACGCAGCGCTTCTCCAGTGCAGTGGGACTGGTCACCATCGTGGAGTGTGGGCCTGTCTTGTTAGGACCCCCTTTACTAGGTAAATTCAAAGACATTTACAACGACTACCAATACACCTACCAGAGCTGTGGGGTGATCCTTATTATTGCCAGTGTGTTCCTGTTCGTGGGGATGGGTATCAACTACCGGTTGTTGCACAaagagaaaaaggaggaggaaaggaaggctAATCCGGAGGGAAAAGAAGAAGAGTCCAACAAGGACAATGCTGCCAAAGAAGCCAGCAACGACAGGTTGAGAGCATTTGATGAGGCAAAAACTGCGGAAGACACAGTCTAACTCTCATTACCGTGTGAATGTGTGAATTTGATGTCGTCGCAATACAGTCAATTAAGATAATGTAGACATCAAATTCATTCAGTTCAAGTCCTTGCCATCTAGCAGATTTCATGTAAAGATAATTCTCAGCCCCATTTCCACTTCTGTCATTGAATAATGTATTATTAGTATAATATGACAGGAGCAAGATACACTTGTGTATGATATAGGCATGCAATCTCTACTGACATGTACTGCCACCCTGCAAAAATATACTCTATGTTATCAATCTGGACTCCAGATGGTCCATTTTCTGCATAAGTGTTGTGATATATTTTTGAATATTATTAGATACAGGTCATTTGTTTATACTGTGTTTGGAATTTCATAAATGCACTTTCTATAACTGCAATTTATTATTCTGTGAAAAAAAATGGAACTGCTATAACTTTTAGAACCTTTAATAAATCACTGTAACATTTTG

Function

NR:

description
monocarboxylate transporter 1-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021609262.2 False 2265 mRNA 0.49 5 40804053 40816448
XM_021609263.2 True 2121 mRNA 0.49 4 40804053 40816448

Neighbor

gene id symbol gene type direction distance location
tshba tshb coding downstream 47834 40754249 ~ 40756219 (-)
slc25a55a LOC106582726 coding downstream 54790 40733892 ~ 40749263 (-)
LOC110527758 LOC105008416 coding downstream 192004 40603451 ~ 40612049 (-)
LOC110527756 LOC106582724 coding downstream 207665 40585908 ~ 40596388 (-)
LOC110527755 LOC106582604 coding downstream 241101 40560358 ~ 40562952 (-)
LOC110527764 LOC106582736 coding upstream 340217 41156665 ~ 41348915 (-)
mov10a LOC106582737 coding upstream 628502 41444950 ~ 41467330 (-)
capza1a LOC106582739 coding upstream 653118 41469566 ~ 41485470 (-)
wnt2ba LOC106582740 coding upstream 703780 41520228 ~ 41536290 (-)
cttnbp2nla LOC106582741 coding upstream 726459 41542907 ~ 41567433 (-)
G607218 NA non-coding downstream 16113 40782789 ~ 40787940 (-)
G607213 LOC106582731 non-coding downstream 21767 40773270 ~ 40782286 (-)
G606953 NA non-coding downstream 186805 40617045 ~ 40617248 (-)
G607250 NA non-coding upstream 8603 40825051 ~ 40825260 (-)
G607251 NA non-coding upstream 8870 40825318 ~ 40825618 (-)
G607256 NA non-coding upstream 17092 40833540 ~ 40833746 (-)
G607260 NA non-coding upstream 24473 40840921 ~ 40841120 (-)
G607278 NA non-coding upstream 38233 40854681 ~ 40854936 (-)
G606973 NA other downstream 174173 40629249 ~ 40629880 (-)
LOC110527741 LOC106582711 other downstream 579886 40135298 ~ 40275270 (-)
G606135 NA other downstream 962722 39838891 ~ 39841331 (-)
LOC110527723 LOC106582696 other downstream 1735225 39063005 ~ 39123578 (-)
G604484 NA other downstream 2164653 38584293 ~ 38639400 (-)
G607932 NA other upstream 344700 41161148 ~ 41163397 (-)
G608888 LOC106582750 other upstream 1128123 41944571 ~ 41951244 (-)
G608900 NA other upstream 1152121 41968569 ~ 42025704 (-)
G610047 NA other upstream 2019299 42835747 ~ 42836069 (-)

Expression


Co-expression Network