mst1ra (LOC106582756)


Basic Information

Item Value
gene id mst1ra
gene name LOC106582756
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 42363630 ~ 42384059 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021609291.2
CTTGAGACTGCACATTCATTCCTGGGATGTGTTGGTCTTTCGTCTGTTAGCAATGCATGTCTGACAACTGTATGCAGACAGGGCTACCCCACAGCAGCATTCCTTCTGCCAAGAATGCTTGGGACATACTGTACTTGGGAATGTTGGGTTTCCTGTTACCCGGAAGAGTGAGTGCGTTCATGCTTTCATGAGTGTGAAAATTGTTGTCCTTGAAGTGACTTCAGATGATGAGAGTAAAAAGTAATCTGGATGTTACATAGGAAAGAAAAGAAACCTCAGAACTGAGATTGTGCAATCAAAACCAGTACATACTTCATTGCCGTAGGCGGGGCATGTGATGAGTGTACAAAGAACCTTGCCTTGTCCCACACGTAATTTCTGAAATTGCTCCATAATTTCGCACAGAACTGAAAAACGTGTAATAGTGCCACTTACAACTAGACAACTGGTGTTGTGTCTGGGAATCAAGACACAGTTTAAACTGGATGCGCGGCATAATTTATGCACCCAGagTGTCTGCTGTTCCCCAGAATGttcagaaggagaggagaaatctCCTGTTCTCGTGGCTGTAGGTAAcagacagtagcagtaacagtgcgGTGTGGAGTGGCGATGGTCCCCTGGGCCACCTTCCTGGTGACATGCATGTGGATACAAACCCTCAAAGCCTCAGGACTGTACACCTGTCCCAGGACCCCTCGCAAGGAGGTGGATTTCAACGTTAGCTACTCAATACCCCACTTCCAGACAGCTAAACCCATCCAGAACATAGTGATCAACCCGTACGAGCCTGAGGTTTATGTGGCTTCTCAGAATGTCATTGAGGCAGTGAGTGGTAGGCTCAGTAAGTTATGGGAGCTGAGGACAGGCCCAGTGGGCATCCCAGATTGTCAGACCTGTGGCCTGTGTGGCATTGAGGCTGATCCTGAGGACTCAGTGGACACGAACAATGAGGTCCTGCTCTTGGACTCATCATCTTATCTTACCTCTCTATACTCCTGTGGGAGCTCTCAGCATGGGGTCTGTTACTTACATGAAATTAACTCTAACGGTACCCCACCTAAATCTGAATGTCTCTTCAGGCAGGATGCTAACTCACCCTCCGACTGCCCTGACTGCCTGGCCAGCCCCCTGGGCACTGAGGTCATCATCGTGGAGCAAGGCTACACAACCTATTTCTTTGTAGTGGCTACACTCAATGAGAGTGTGGCACAGAGGTACGGCAGATTGTCCATATCGGTGCGCCGGCCGCTGTCGACCCTGGATGGCTTTGACATGGTCATGAAGGGTCTGACCGTGCTCCCTCAACTACAGAACTCCTACCGGATCGACTACATCTACAGCTTCTCCACACAGGATTATGTCTATTTTCTGTCTGTCCAGAGGGAGAACTTCCTGGACTCCTCTCTGTATCAAACGCGTCTGGGCCGTCTTCCGGTGAAGGACACAGAGGTGTGGATGTACCGTGAGCTGGTGCTGGAGTGTCGCTTCGAGCCCAAACGCAGgcggaggaggagaaggacagggagCAAGGTGTTCGAGGACGTGGTTTATAACAGGCTGCAGGCGGCCCACTTCAGCCGGGCCGGGAAGGAGCTGGCAGACGAGCTAGGAGTGGGGGAGAAGGATGACATTCTCTATGGGGTGTTTGCAGAGACAGATGACTCTGGGAAGCCCTACAGTAACTCAGCCCTGTGTGCCTTCCCAATTGACTACGTGAACAGGGCCATTGATGAGGGAGTGGAGGACTGCTGCAGCTCCAGCCCAGAGCAGCTTTCCAGGGGGCTCTGCCACTTCCAGCTCTGCGAGAGCTGCCCTCATGAGAGCTCAGAGAACAATGCCACGTGCAGGGAAAGTCCCACCCTAGTGTCTAAACCCTACTACAGGGTGGACCTCTTCAACAGGTACATGAACAACGTCCTGCTCACCTCAGTGTTGGTTACCATCATCGGGGACAACACTGTGGCACACATTGGCACCAAGGACGGCAGGCTGCTGCAGCTCATCCTGAGGAGGTCAAGTCCCATCATCTTTGCCAACTATTCTCTGGGTGAGGAAACAGAAGTGTCCAGGAAAGCTGCTGTGCAGTCCGACGAGTCCTTGCTCTTCGTGGTTGGAAATAAGATGTTCAGTGTGTCTCCTAAAGGGCCCGGATGTAAACACTTTCTAACCTGCTCCACATGCCTGGCGGCGCCCAGGTTTACAGGGTGTGGCTGGTGCTCGGCGGTGTGCTCCAGGCAGGAGGAGTGCCCCGCCCAGTGGAAGAATGAGTCCTGTCCTCCCTTCATCACAGAGTTTTTCCCTAAGACAGCTCCCCCTAATGGCGAGACAGAGCTTAAGCTGTGTGGCTGGGAGTTCCAGTCTCCTATAAGACCAGCCATCATCAGCAAGGAGACCCACCTGGTGAGGGTGGGAGAGACCCCCTGCACTGTACTGTCAGAGAAGAGCAACAGCACACAGCTGGTGTGTAGCATTCACCCTAATGTTACAGGCCCATACCAGGATCTCAACATCACCGTGGAAGTGCATGAGGGGAAGGTGGAGGGACGCTACTCAATCCAAGGGCAGGCTCAAATTACAGGGTTCACTTTTGTGGAGCCAAGTATCACAGAAATCATGCCTGACTACGGGCCTCAGGTAGGGGGTACTTTGGTCACACTGACAGGGCCTCACTTGAATGCTGGGATGATTAAGACTGTGTCTATAGGAGATCAGGACTGCCCCATCAAGAGCGTCTCCAAGGGTACGGGGACCACGTCCTCCATAGTCTGCCTGTCTAAAGGTGTGGCAGCAGTGATGAAGGTGCCCGTGAGGGTTGTCATTGACCAATCCCAGGTGTCCACTAACAAGATGTTCCACTACAAGAGCAACCCTGTGATCACTGAGATACGGCCTGCCTGCAGCTTCCGAAGTGGATCCAAGATCATCATCAAAGGCAAAAATCTGGACTCTGCGTACAACACTCTCATCCACTACAAATCAAACAAACTGAAGAAGTCTCTGCAGCGTGTCTGCAACGGCACAGCAACCCCCACGCACATGGAGTGCTTTGCCCCCGTCTTCCCCAGAAATGAGACAGACAAGGGCTTTATTAATATCAGCATGGACGGGGCCATCAATCTGGTGAAGAAGAACTTTGAATACCAACCAGACGCCAGCATCACCCCCTTTGAGTACGAAGGCAACGTACTGAGCCTGAGCCCTGGACAGACTGAGGTTTCACTGCATCACAACAAGCTAAGCATGGTGAGCCTCTGCATGGAGATCATAATGACCATCGGAGGTGTGGACTGCGGAGTCCAAGTGCTGGACAACGAACTGACCTGCAGGATCCCCAAGGAGCTCATCATCCCCAGGGAAGGTTCGCCTGTCATGGTGTCTGTGAATGGGCGTGCCTATGAGGTGGGCACGGTGGTCTTCgtcaacaacaccaccaacatAGTGGTTATCATGTTTGGAATTGTCATTGCGTTGTGTGTTGGTGCTGCCATGGCCTTCATCACCATGAAACATgtgaggaggaagaagaaagCCAAAGTAGACACTGGTTTAGCAAGGATGTTTGTCCGCAGTCGGATAAGCAGCAACCCTGACCAATCCCCCACTGGTGACTATCGACAAGAATGGTCCAACCAGGTGAGCCAAAGGACAGGCTCAGGAGGGATAGCCTTACATAGCCTGCTCTACGCTGCCACTTTTGACCCCTCAGCCACGCCTCTGATCTCATTGGACACCCTGAGACCTGAGCTCCTGGAGGAGGTCAAAGACGTCCTGATCCCAGCCGACAGGCTCAATGTTCACCAcaaccagatcatcggcaaagGTCATTTTGGGACTGTGTACCACGGCTACCTGACAGACAACAATAACCAAGAACAGTTAATCCACTGTGCTGTTAAGTCATTGAACAggatcACAGACCTAGAGGAGGTGGAGCAGTTTCTGAGAGAGGGCATCCTGATGAAGGAGTTCCACCACACCAATGTTCTCTCCCTGCTGGGTATCCTGCTGCCTCAGGAGGGGCTCCCCCTGGTGGTGCTGCCCTATATGAAACATGGAGACCTGCGCCACTTCATACTCTGTGAAAGGAGGaaTCCAACAGTGAAAGACCTGATTGGCTTTGGGCTACAGGTTGCCAAAGGTATGGAGTACCTGGCCCAGAAGAAGTTTGTACACAGAGACCTGGCAGCTCGAAACTGCATGCTTGATGAAACGTTTACGGTGAAGGTGGCAGATTTCGGAATGGCCAGAGATGTGTTTGACAAGGAGTACTACAGCATCCAGGACCACAGGAAGGCCAAGCTGCCAGTCAAGTGGATGGCCATAGAGAGCCTGCAGACACAGAAGTTCACCACTAAGTCAGACGTGTGGTCATTTGGGGTCCTGATGTGGGAGCTGTTGACCAGAGGAGCGAGCCCCTATCCTGAAGTGGACCCCTACGACATCACTCACTTTCTATTAAAGGGACGCAGGCTGCACCAACCACAGTTCTGCCCTGATGCTTTGTACTCCATCATGTTGGAGTGCTGGGACCCGGAGCCAGAGCTCAGGCCTGACTTCCACACTCTGGGCAAGGAGGTGCTAGAGATCTTGTCCTGCCTGGAGGGAGAGCACTACATCAGCCTGAAGGTGACCTACGTCAACCTGGACCAGCCACGGCCTTACCCTGGCCTTACCACCTCTGCTGATGAGGCTGAAGCCTCTGGATCAGACTCAGACAGCGTTGTGTCCAGCTGAGGACCACAGAGCCTCAGGGGTCAACAGAACTGACCGGTCCATACCATACCAGAGTTTActggaccaaaccagaccaggaCAGTAGGGCGTGGTCAGAGGGCACGGATGGGGGCATGACCATTCATCGTAGATGGAGGGCTCCCCCTATTCCCATCCACAACGCAATATTAGTACACAGAAATTATTTTTCACTTCTGTTACTCAAGACTGGATTGATAAGGAATAGAATATTGATTATTGACTAAGAAGACCTTGTGAAATGTGTTTACTTGTGTGAGCATTGACACTGAATTTCAATGTAGTTTTCCCTTCCTTGTGAGTACACAAATTATGACTATATCATATTTGTCTGTACTTTCAATGCACTTGTGTTTTTTTAAGGACGATTTTCAGGTGAAGAAATTGTATTTATAATGGGACACCAAGTGAACCTTCTCCATTTCTGAAGCACAGCTGTAAATATGAACAActgaatgtacagtatactgtatgtctgaaatgtgtttttgtgttatAATAACTAAGGACTATGATTTGAACATGTCATGTTAAATCAGATGCATTTTCACACGTCATATTTTTCTCACTTTTTTGCTGGCATCCAAAGATATGCCTTAGAGATGGTCATTGGTGTTGATGGTCATTTGATGTATGGTTCTGAATGTGGCCATTGACTGAACTGGTCATTCTCATTGATACTTCTGAGAGGATATTTCAGTGAACCAAACTAGCGTTGTCTATGGTTATCTGCTAGCATTCTAGTAGATAcacatagacttccagtcattgcgctaacgctagttagaattggcttgcgaaactacagtggggagaacaagtatttgatacactgacgattctgcaggttttcctactgacaaagcatgtagaggtctgtaattttatcataggtacacttc

Function

NR:

description
macrophage-stimulating protein receptor-like

GO: NA

KEGG:

id description
K08252 E2.7.10.1; receptor protein-tyrosine kinase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021609291.2 True 5660 mRNA 0.50 21 42363630 42384059

Neighbor

gene id symbol gene type direction distance location
LOC110527785 LOC106582755 coding upstream 131031 42226808 ~ 42232599 (+)
LOC110527783 LOC106582753 coding upstream 137958 42060328 ~ 42225672 (+)
LOC110527782 LOC106582752 coding upstream 304583 42000923 ~ 42059047 (+)
LOC110527781 LOC106582750 coding upstream 407298 41944537 ~ 41956332 (+)
LOC110527774 LOC106582743 coding upstream 608753 41742561 ~ 41754877 (+)
camkva LOC106582757 coding downstream 77908 42461967 ~ 42500915 (+)
LOC110527788 LOC106582758 coding downstream 129037 42513096 ~ 42530382 (+)
LOC110527789 LOC106565988 coding downstream 301086 42685145 ~ 42759404 (+)
gnat1 LOC106582761 coding downstream 376327 42760386 ~ 42767396 (+)
LOC110527794 LOC106582762 coding downstream 470861 42854920 ~ 42883680 (+)
G609113 NA non-coding upstream 87567 42275826 ~ 42276063 (+)
G609108 NA non-coding upstream 89594 42273817 ~ 42274036 (+)
G609099 NA non-coding upstream 98012 42265281 ~ 42265618 (+)
G609098 NA non-coding upstream 98963 42264436 ~ 42264667 (+)
G608446 NA non-coding upstream 486400 41875209 ~ 41877230 (+)
G609223 NA non-coding downstream 46461 42430520 ~ 42430738 (+)
G609273 NA non-coding downstream 117500 42501559 ~ 42501773 (+)
G609277 NA non-coding downstream 125985 42510044 ~ 42510325 (+)
G609279 NA non-coding downstream 127484 42511543 ~ 42511793 (+)
G609226 NA non-coding downstream 146813 42530872 ~ 42531524 (+)
G608390 LOC106582745 other upstream 532822 41827211 ~ 41830808 (+)
G607904 NA other upstream 900461 41462824 ~ 41463169 (+)
G606977 NA other upstream 1729191 40634181 ~ 40634439 (+)
LOC110527751 NA other upstream 1922998 40438879 ~ 40457742 (+)
G606469 NA other upstream 2132405 40230885 ~ 40231225 (+)
G609436 NA other downstream 436897 42820956 ~ 42821245 (+)
G610436 NA other downstream 1026332 43410391 ~ 43410806 (+)
G610563 LOC106582806 other downstream 1199961 43584020 ~ 43584896 (+)
G610622 NA other downstream 1444945 43829004 ~ 43831880 (+)
si:dkey-264d12.5 LOC106582817 other downstream 1618565 44002556 ~ 44035143 (+)

Expression


Co-expression Network