LOC110527799 (LOC106582765)


Basic Information

Item Value
gene id LOC110527799
gene name LOC106582765
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 42923547 ~ 42930634 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021609316.2
AAAGCCACTCAGACGCCCCCATGGTTTTATCGCGAAGCGCATGTGTCACTCTAGCCTCCGCTGTCACGTGACTCTGCTCTAGGACGTTGTCTATCTTTTGACACAAATATTGAACGATGCGACCATTCGTCGAACTCGACAATTGCGGGAACAGgaGCTGATCTGTGTTGGACCAGAGAATGTGGAAAGTTGTGTGGGCAACACTGCTGCTCCTGGCCACTGTGTGTGCCCAGAGAGGCTATGCCAAGGAGACCAAGGGAGCGCCGAAGGTGGGGCACGTGTCAGTGGTCATAGTGGGAGGTACAGGTGACTTGGCTAAGAAGTACCTGTGGCAGGGCTTCTTCCATCTGTACGCCAACCAGGTGAGTAGCGGCTACAGCTTCTCCTTTTATGGCGGAGGCCTGTTGCCCAAGGATAAGGCCACGCCGTTCCTGTTTGAGGCGCTAAAGGGAGTGGTCTGCCCTCGGGAGCTGTCTGTGGAGCGCTGTGCCCTGGTGAAGGAGCAGTTTCTGAAGCTGGCAGAGTATTGGCAGCTGAAGACTTCAGAGGACTACCAGGCCCTGGGCAAACACCTGACAGAGCAGCTGACGCAGGAGGGCATAGTGGAGGCCGGCAGGCTGTTTTACCTGTCAGTGCCAGCCTTCGCTTATGCGGACATTGCAGAAAGGATCAACAACAGCTGCAGACCGACCGACGGGGCGTGGTTGAGGGTGGTGCTGGAGAAGCCGTTTGGCCATGATTTCAGTAGTGCCCAACTACTGTCCACTCAACTGGGTACCTCCCTCAAGGATGAGGAGATGTACAGGATCGACCACTATTTAGGGAAGCAGGTTGTCTCTAAGATTTTGCCATTCAGAAGGGAAAACAGTAAGCACCTGGATCCTATCTGGAACAAGCACCACATTGAGAGAGTGGAGATTGTACTGAAGGAGACCCTGGATGCCGTAGGTCGTATTCCCTTCTATGACCAGTACGGTGTGATCAGAGACGTGATACAGAACCACCTGACTGAGGTCATGACCCTTCTGACCATGGGGCTCCCAGCCAACCTGAGCGACGTGAAGGAGGTCCTCAGGAACAAGCTGAAGATCTTCAGTGCCTTGCAGCACCTGGACAGGAACTGTGCCACCATTGGTCAGTACCAGAACTACAATCTAGAGGTACAGGAAGAACTGAACAAAACAAAGGAGTATTACAGCCTCACCCCCACCTTTGCAGGTATCATGGTGCATATTGACATAGCCCAGTACGAGAAAATGCCAATCATCCTGACCTCAGGGAAGATGCTGGATGAGCGCTTAGGCTATGCTCGCATTTTGTTCAAGAATGACATCTTCTGTGTCCAGAGCCATAACAGCGTCCACTGCAAGCCTAAGCAGATTGTGTTCTACTTTGGCCACGGCACTCTGCAGTACCCAGCCATTCTTGTGAGTAAGAACCTGTTCAAGCCAGACCTGATGGACACTGAGTGGAAGGAGATAACGGAACACAAAGATGTCAGTGTATTAGGTATGCCCATCTCTGACTACTATGTGCTGACACCAACGGTGCAGAGAGAGGCTTACGCAGAACTAATTTCGCACATCTTCCAAGGCCGGAAGGACAGCTTTATCAGTACTGAGAACCTGCTGGCCTCCTGGGGTTTCTGGACTCCTCTCCTGCACGGTCTGGCCAAAACCTCCCCCCGCCTGTACCCTGGGGGAGCGGACAATGGCAACATGCTGGACTTCAAACTGTTGGGACGGGAGGTGACCTTCGCCAACGAGGCTGTTGTCATGATCCCCCAAGATCACATGGGCGGGTCTGGTGCTGAGAGCTTCCAAGTGATGCAGGGGAAGTACCGCAGCGCTGAAATGGTCTCTGCCTGGCCCGAGGAGCTCATCGTGCGGCTGGCCGCAGACCTGCAGGCTTCAGCGGAGAAAGCGGTAAGGGAGGGTGGCCGCTTCCACCTGGCCCTCTCCGGGGGCTCCAGTCCCCTAGCTCTGTTCCAGAGGCTGGCCCGACACCACTACTCCTTCCCCTGGAGGGACACCCACGTTTGGATGGTGGACGAGCGATGCGTGCCTCTCACAGAGTTGGACTCCAACTTCCGCACCCTGCACGACCACCTGCTCCAACACGTGAAGATGCCCTATTTCAACATCCACCCCATGCCTGTGCAGATGAACCAGCGGCTGTGTGTGGAGGAGGATAGTGGAGCGCTGCTCTATGAGAGAGACATCAACCAGCTGGTTAATGCCTCCAGCTTCCACTTTGTCCTTCTAGGAGTGGGCTACGACGGACATACCGCCTCCCTCTTCCCAGGCAGCAAGCTTGACGCCCATGGGGACTGTCTGGTAGCCCTCACCGAGAGCCCAGCCAAGCCTCACCAGCGTATGAGCCTCACCCTCAGGGCTATCAACCAGGCCCAGAAAGTAGGTGTGCTGGTGATGGGTAAGAGCAAACATGAGCTGGTCACCCAGCTCAGCCGAGTTAAGGACAACCCAAACAAGTGGCCCATCACTGGTGTCCGGCCCACCAGTGGCAGGCTAGTATGGTACATAGACTATGATGCTCTTTTAGGATAGCAAACAGCTGCTTTTGGCTCTGTGATACTGTAGCAATGAAACAATGTACATTTAATTGGAAATGAATGATTTGCTGTAATTTTACTATTTTGCTGTATTTTGACCAAGAATGTAAAGTAATGATGAAGGTTCTGTTGATTCTGGGCACCTTAAAGTATGGAAGTACATATGGTATACtggtatatattttatttttcaatatACAGGATgtaggggtttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatgtgtgtttatttaCCAAATGGACATCTCAGGAAAGCCAAGTGGATATGGAAGTTTGTTCGTCTTTAATCATTACTCATGATCTGAATAACTATTATATTTAGTTGTAAAAACAGTATACATTTCACATAAAGCTACCCATTCCACACTGAACCAGCATAGAATAGTATTGTTGAAAGGGGACTTTAAACTGTGAAAGACCAACAATTTTGGTTCAAATTTCATTCAATCAAATATGCCCCTATGGTAAATGGATTTGAACCTTTTGCTCCTATGGTCGACAGATAATGTAATCTATAGCCATGTATCATTGTATTTGTGCCTAAATGCCAATTTGAAATCAAAATGCAAAATGTACTGTCCAGTACATTTAAATCACATAAAAAAGCATATTATGATCCATTGCTGCCTTTGGTTTAATCTATGCTTGTggataaaaaatcaaataaaaacacaatTATCTAATGTATTATTTGATATCTATGTGAAATGTACAATTTCCACAGCCTTTGaccccctgtgtgtattctcccCTATGAGCCAGCCCAGTAGTTCCTAATACTTCCTcttttaaagacatgctccggtactTTGGGGACTTAGAAAtgctttttttttaaacctctcgCTTTGGGCTGTATGTGTCTGTAGATagccacaaaatccctagtttgaaagtgaTTGTTTTCTTGAACCTGTGCAGTGCTAATTTCCCTACATTTCCCCCTCTTGGGCCAGCCCCGTAGCAATTTGAGtcctagccaatgagcttcagcccctcacatttgagtgacagctagcaagaggccTGGCCGGCATTATCCAATGAGGTTGCAGGGTGGGCCCAACTTCTCAGTGGAcacagcagagaaagagagaatgagcaatgacgtggtgcacatgTGTTATGTTGTATGCAATTTccggggaccacttttggctactttcagaactactggctaaaatgtatacaaaaaGTATCAGAGAATCTCTTAATGTGAGTGAAATGGTGCTTACAAGATGTcgtacaagtacagtgaaatgcttaactacGTTGTGACCTtccaaaactattttttttttgaTACTGTGAGTCTACTCATTTGAGACGCTCTTCACTGGCATTCACACAGATCTGCTCACTgcacaacatttgatttgaaagtgtGTAACTAACTTGAGTTCATAGATGTTTTATTTGTGGATTGAATTAGGAGTTCCTCTTACGTAAAGGGCCTTTTTTTTTAGGATATTGAAATGGATTTTAAAATGGGTTGATGAAGTTTAGTTCAACCGCTTCACTGCGTTGCCTTAATTCATTTTACGGACAGGTGTATGTTAATATATATGTATTAGCTGAAGGTTATTTTACCTGGGAAAAATATGTAATTAGGTTTCACTTTGATGTTTGCACATACAAATGTTATAGCACCTGATTATTCTGAATGCTGTAAGTGAAAGTGTGGTTTGTTCCTTATCACTCTGAGGTTCAAACAGTCTATGAATAAATGATTTACAattgtttatttttatacatATGGGGACCTAAACACCATTTttctacacactgtacacacatggAATTAATGTAACAGTTAATCACTGTTTTACCACAAGGAAATAAACTACAGCTTTCACAA

Function

NR:

description
GDH/6PGL endoplasmic bifunctional protein-like

GO: NA

KEGG:

id description
K13937 H6PD; hexose-6-phosphate dehydrogenase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021609316.2 True 4520 mRNA 0.47 5 42923547 42930634

Neighbor

gene id symbol gene type direction distance location
LOC110527794 LOC106582762 coding upstream 39867 42854920 ~ 42883680 (+)
gnat1 LOC106582761 coding upstream 156151 42760386 ~ 42767396 (+)
LOC110527789 LOC106565988 coding upstream 164143 42685145 ~ 42759404 (+)
LOC110527788 LOC106582758 coding upstream 393165 42513096 ~ 42530382 (+)
camkva LOC106582757 coding upstream 422632 42461967 ~ 42500915 (+)
rbp7b LOC106582767 coding downstream 2349 42932983 ~ 42935248 (+)
LOC110527804 cssa22h3orf18 coding downstream 55026 42985660 ~ 42991364 (+)
LOC110527808 ab14b coding downstream 97290 43027924 ~ 43035211 (+)
LOC110527818 NA coding downstream 594053 43524687 ~ 43526668 (+)
LOC110528952 NA coding downstream 596297 43526931 ~ 43529047 (+)
G609482 NA non-coding upstream 567 42919954 ~ 42922980 (+)
G609486 NA non-coding upstream 4025 42919218 ~ 42919522 (+)
G609504 NA non-coding upstream 7043 42915831 ~ 42916504 (+)
G609489 NA non-coding upstream 32979 42890026 ~ 42890568 (+)
G609457 NA non-coding upstream 75653 42847466 ~ 42847894 (+)
G609511 NA non-coding downstream 12097 42942731 ~ 42943096 (+)
G609440 LOC106582768 non-coding downstream 14595 42945229 ~ 42952239 (+)
G609512 NA non-coding downstream 23038 42953672 ~ 42953951 (+)
G609506 NA non-coding downstream 29786 42960420 ~ 42962095 (+)
G609487 NA non-coding downstream 53072 42983706 ~ 42984145 (+)
G609436 NA other upstream 102302 42820956 ~ 42821245 (+)
G608390 LOC106582745 other upstream 1092739 41827211 ~ 41830808 (+)
G607904 NA other upstream 1460378 41462824 ~ 41463169 (+)
G606977 NA other upstream 2289108 40634181 ~ 40634439 (+)
LOC110527751 NA other upstream 2482915 40438879 ~ 40457742 (+)
G610436 NA other downstream 479757 43410391 ~ 43410806 (+)
G610563 LOC106582806 other downstream 653386 43584020 ~ 43584896 (+)
G610622 NA other downstream 898370 43829004 ~ 43831880 (+)
si:dkey-264d12.5 LOC106582817 other downstream 1071990 44002556 ~ 44035143 (+)
G613664 NA other downstream 3348100 46278734 ~ 46279333 (+)

Expression


Co-expression Network