rbp7b (LOC106582767)


Basic Information

Item Value
gene id rbp7b
gene name LOC106582767
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 42932983 ~ 42935248 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021609317.2
AGTGTGTACATGCGTTACAGCCTATTCTATTTGCAAGCGCTTATCTCAAATGTTATTTCGTCATATAATTGTGCAAAAAGTAATGTTCCGCCCTCCACTGGGCTACTCTCTCCACTCTATTGTCCAAAAATAGCTACCAACTATGAAAGATGACCCCTGCCCTATATTAACACGCCATAGGACAACACATCCCAGAGACTTTAAATCGGTTCATTTAACAACTGCTTTCAATTGAAGTTTTTACAGTGCCACACGAGGATTCACCATGCCTATCGACTACAGTGGCACATGGGACATGACTAGTAATGAACACTTTGAAGGTTACATGGTTGCTCTTGGTATTGATTTTGCAACACGCAAGATTGCAAACATGTTGAAGCCTCAGAAAGTGATTGAACAAGACAGTGATTCTTTCACCATCAAGACACTCACTACCTTCAAAAACTACACAGTCTCATTCAAGATTGGGGAAGAGTTCGAGGAGGTGACCAAAGCCATGGATAACAGAAAAGTCCAGACGGTGGTCAACTGGGACCATGATAAACTAGTGTGCGTTcagaagggagagaagaagaacagAGGGTGGACGCACTGGATAGAAGGAAATGAGCTCTATCTGGAACTCACCTGTGAGGATAAAGTCTGCAAGCAAATTTATAAAAAGAGTGcttgaccatgctttcaccatAATATTTCTGCAAccttatattttttaaatatgcttCAATCATAAATGTATCACTAATGTGATATGCTCATGGTACACGTGCTTTGAGTAGCCCAAGAATCTGAAGAAAACATATTAACATCATTAATAGAAATAGCAATTGTAATCATATGCTTGATGTGCATTGAGgatttgtattgtattgttatttttgAGTGACTTAATAGTTCATGATTATCTACAATAAATGTGATTTACCCACTACCATGAATAAAGCACTGGACCATAATTCAAA

Function

NR:

description
PREDICTED: retinoid-binding protein 7-like

GO:

id name namespace
GO:0006810 transport biological_process
GO:0005215 transporter activity molecular_function
GO:0008289 lipid binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021609317.2 True 962 mRNA 0.39 4 42932983 42935248

Neighbor

gene id symbol gene type direction distance location
LOC110527799 LOC106582765 coding upstream 2349 42923547 ~ 42930634 (+)
LOC110527794 LOC106582762 coding upstream 49303 42854920 ~ 42883680 (+)
gnat1 LOC106582761 coding upstream 165587 42760386 ~ 42767396 (+)
LOC110527789 LOC106565988 coding upstream 173579 42685145 ~ 42759404 (+)
LOC110527788 LOC106582758 coding upstream 402601 42513096 ~ 42530382 (+)
LOC110527804 cssa22h3orf18 coding downstream 50412 42985660 ~ 42991364 (+)
LOC110527808 ab14b coding downstream 92676 43027924 ~ 43035211 (+)
LOC110527818 NA coding downstream 589439 43524687 ~ 43526668 (+)
LOC110528952 NA coding downstream 591683 43526931 ~ 43529047 (+)
mon1bb LOC106582805 coding downstream 601749 43536997 ~ 43545817 (+)
G609482 NA non-coding upstream 10003 42919954 ~ 42922980 (+)
G609486 NA non-coding upstream 13461 42919218 ~ 42919522 (+)
G609504 NA non-coding upstream 16479 42915831 ~ 42916504 (+)
G609489 NA non-coding upstream 42415 42890026 ~ 42890568 (+)
G609457 NA non-coding upstream 85089 42847466 ~ 42847894 (+)
G609511 NA non-coding downstream 7483 42942731 ~ 42943096 (+)
G609440 LOC106582768 non-coding downstream 9981 42945229 ~ 42952239 (+)
G609512 NA non-coding downstream 18424 42953672 ~ 42953951 (+)
G609506 NA non-coding downstream 25172 42960420 ~ 42962095 (+)
G609487 NA non-coding downstream 48458 42983706 ~ 42984145 (+)
G609436 NA other upstream 111738 42820956 ~ 42821245 (+)
G608390 LOC106582745 other upstream 1102175 41827211 ~ 41830808 (+)
G607904 NA other upstream 1469814 41462824 ~ 41463169 (+)
G606977 NA other upstream 2298544 40634181 ~ 40634439 (+)
LOC110527751 NA other upstream 2492351 40438879 ~ 40457742 (+)
G610436 NA other downstream 475143 43410391 ~ 43410806 (+)
G610563 LOC106582806 other downstream 648772 43584020 ~ 43584896 (+)
G610622 NA other downstream 893756 43829004 ~ 43831880 (+)
si:dkey-264d12.5 LOC106582817 other downstream 1067376 44002556 ~ 44035143 (+)
G613664 NA other downstream 3343486 46278734 ~ 46279333 (+)

Expression


Co-expression Network