LOC110527807 (LOC106582772)


Basic Information

Item Value
gene id LOC110527807
gene name LOC106582772
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 43003314 ~ 43027816 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036983284.1
GTGTGGGTGGACGGGATGCAGTCATTACATTCACACTTATTTTGTAACTCTGGCTTTTCCCGTCCAAAAAAACACCacaatatatctttttttttttataggctTCTTAATTGTTCACCTTGCTCTAGTCTAGCCTAATCAATTTCGTAAAAACACGCCAGCCAGAGGAACTCCAGAATTGTCAAAAACATTATTAAGTCCTTGGATCTGCTTCCATCCAGCACTGGTCTGTCTTATTCTCTTCTGTAACCATGAAACTCATTATTTCCTGTGTTCTCCTGGCATTTTGGAGGGGATTGGTCAGTGGGTCCCGCAGTCCTCTGAATGACTTCCAGCGTTCTGAGGGAAGGGAGCTTGTTCCGACCTCCTGGAACTCTGCACGGGTGCTGATGCTGCCAGGGCTGACGCTGGAGGACTGTGCCAGACGCtgttcacacacactggactgcaGAGCCTTCAACTACGAGACGCGCCGCTCCATCACCTGTAAACAGCTGCCATGGGTGGAGGATGGCAGCAACGCAGAGGTCAAGAGGAACGTCAACTGTGACCTGTATGAGAAGAAGGTGTACGTAAGGAAGTGCATTGTGGGTAAAGGAGAAGACTATCGAGGCAAGGTGTTCACGACGAAAAATGGCCATACTTGTCAACAGTGGTGGTCAAAGTTCCCACACGATCACAGATGGACACCCACAGCCACTAATGGTTTGGAGCTGAACTACTGCAGGAACCCAGATAGGGACCCCATCGGGCCATGGTGCTACACCAATGACCCAGAACGCCGCTATGAGAGCTGCAATATCCCCCACTGCAAAGACgAGGTGTGTATCACATGTAACGGGGAAGACTACAGGGGCCAGGTTGACCACACAGTGAGTGGCAGAGAGTGTCAACGTTGGGACCAGCAGTACCCACAACAACACATCTATCAGCCTGAGAAGTATCCAGATAAGAGCTTGGATGATAACTACTGCCGTAACCCAGACTCCTCCCCTGTTCCTTGGTGCTACACCACAGACcctgatatggagagagagagttgccaGATCAGCAAGTGCCCTGCGGTTCCAAAGAGACACCTCCGGTCCAGCTACACCACAAACTGTTTCCGTGGTCGCGGGGAGGATTACCGTGGCAAAGTGAACGAGACGACCGGCGGTATTGCCTGTCAGCGGTGGGACTCCCAGTACCCTCACGAGCACCCCTTCTACCCAAACACCTACGAATGCAAGGGCTTGGAAGAGAACTACTGTCGTAACCCAGATGGATCCGAGGCTCCCTGGTGCTTCACGTCTGTGCCTGAGATGAGGACGGCTCTCTGCTTGCATATCAAACGCTGTGCAGACGACATCGAAGCTGAGGATTGCTACCATGAAAATGGTAAAAACTACAGGGGTGTGGTCCGAAAGACGCGGAAGGGCGTCACCTGCCAGAAGTGGAGTGTCAACATGCCTCACAAAACAAAGATAAACCCAGGGACCCACCCTGAGGGCAACCTGACAGAGAACTACTGCCGGAACCCAGATGGGGACCAACACGGACCCTGGTGCTACACCACTGACCCCAAAACAGAGTTTGACTACTGCGCCATCAAGCAGTGCGCTGGGGAGAAAGTGTCCATCATTGAGCCAGCCGAGAAAGTGGAGTTTAATGAGTGTGGGAAGAGAGATGATCGTTTCGTCAAGAGCATACTCCGTATTGTTGGTGGGCGTCCTGGAAACTCTCCCTGGACAGTCAGCCTCAGAGACAGGAAAGGAAACCATTTCTGTGGAGGCTCCCTGGTTAGCTCAAAATGGGTGATCAGCACTAAGCAGTGTTTCTCCTCTTGTTATGTGGACCTTCCAGGGTACTCTGCCATGATGGGGACTTTGTTCCGTAACCCCAGTGAAGGCGAGCCCGACCGACAGACTATCCCTCTCACCAAGATCGTCTGTGGACCCTCTGAGTCCCAGCTTGTCATGCTACAACTGGAATActCAGCCCAGTTTAATGAGCGTGTGTCTCAGATCTGCCTGCCTCCCGAACGCTACATAGTTCGAAACGGAACCTACTGCGAGATCGCAGGCTGGGGGGAAACTAAAGGCACTTCTACAGATGACTCTGTGCTCAATGTGGCTCAAATACCAGTTATAAGCAACAAGGACTGTAACAAATACTTTCGGGGTCGTGTTCGGGAGAACGAGATGTGCACCAACTCCTTCCAGGGCGGGGTGGGTGCCTGTGAGAGAGACTATGGGGGACCTCTGGCCTGTCAGAACAGTGACTGCTGGGTGCTGGAAGGCGTGATCATCCCCATGAGGCGCTGTGGACACCCAGGCCAGCCCAGCATCTTCATCCGCGTCTCCATCTATGTGGACTGGATTAAGAAGGTCATGGAGATGGCTTAGTAACAGATACAGTATGTCACCAACCAGTGACTGGCCCTATGTTCTAATGGACAACTTTCAACCCCTCTACCCATAGCGCACAATCCACAACGGCCTAATTGTTATCCGTGACCATCTACATAGAATTGTTGTAATATCTGTCATTATGTCCATAATACTCTGTTGTTGTGTAGTATTCTATGTTGTTATGACACAAATATAAGATGTAAATAACCCTG

Function

NR:

description
LOW QUALITY PROTEIN: hepatocyte growth factor-like protein

GO: NA

KEGG:

id description
K23441 MST1; hepatocyte growth factor-like protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036983284.1 True 2605 mRNA 0.51 18 43003314 43027816

Neighbor

gene id symbol gene type direction distance location
LOC110527805 NA coding downstream 1537 42991447 ~ 43001777 (-)
LOC110527803 LOC106582769 coding downstream 20478 42960419 ~ 42982836 (-)
LOC110527802 LOC106582768 coding downstream 51038 42945197 ~ 42952276 (-)
LOC110527801 LOC106582766 coding downstream 70282 42929249 ~ 42933032 (-)
LOC110527798 epha2 coding downstream 92185 42891310 ~ 42911129 (-)
LOC110527806 LOC106582605 coding upstream 6826 43034642 ~ 43329567 (-)
LOC110527809 LOC106582795 coding upstream 400563 43428379 ~ 43433682 (-)
LOC110527812 LOC106582796 coding upstream 409064 43435578 ~ 43439076 (-)
LOC110527811 LOC106582799 coding upstream 411398 43439214 ~ 43458193 (-)
zmynd10 zmynd10 coding upstream 429579 43457395 ~ 43466285 (-)
G610132 NA non-coding downstream 17831 42984725 ~ 42985483 (-)
G610109 NA non-coding downstream 60789 42942126 ~ 42942525 (-)
G610103 NA non-coding downstream 66693 42936397 ~ 42936621 (-)
G610102 NA non-coding downstream 67056 42935956 ~ 42936258 (-)
G610101 NA non-coding downstream 67544 42935531 ~ 42935770 (-)
G610180 NA non-coding upstream 78214 43106030 ~ 43122712 (-)
G610182 NA non-coding upstream 83037 43107127 ~ 43162969 (-)
G610254 NA non-coding upstream 215383 43243199 ~ 43243449 (-)
G610356 NA non-coding upstream 325986 43353802 ~ 43354039 (-)
G610359 NA non-coding upstream 327554 43355370 ~ 43355588 (-)
G610047 NA other downstream 167245 42835747 ~ 42836069 (-)
G608900 NA other downstream 977610 41968569 ~ 42025704 (-)
G608888 LOC106582750 other downstream 1052070 41944571 ~ 41951244 (-)
LOC110527764 LOC106582736 other downstream 1654415 41156665 ~ 41348915 (-)
G610190 NA other upstream 85332 43113148 ~ 43116144 (-)
G610183 NA other upstream 99995 43127811 ~ 43167320 (-)
G610185 NA other upstream 123754 43151570 ~ 43157089 (-)

Expression


Co-expression Network