LOC110527808 (ab14b)


Basic Information

Item Value
gene id LOC110527808
gene name ab14b
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 43027924 ~ 43035211 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021609332.2
TACTCTATTTATGAGGCCCGGCAATACGCCTGATCACCACTGGACGTCAGTAGATTCCAGGTTGAAACTACAGTAGACTGTTTTTCCGTTGAAAAGTGAAACTATCAAGAAAACTTAGTTCAGACAGAAGTTTCTCAGACGGCGTGAagGATGTGTGCTGCTAAAATGACAGAAGGGAGCGTGCATGTGGAATCCTGCAAGGCCCCTATGTTTTACAGACAAGCTGAACCGGCCACAGGTGAAGTACATCTGTCTGTCCTGCTTCTGCACGGCATCCGTTTCTCATCTGAGAACTGGCTCAATATAGGAACACTGGAGACATTGGCCAAAGCTGGCTGTCGTGCAGTGGCCATCGACCTACCAGGTTTTGGCCAATCTAAGTCAGCAGTAGCCCCCTCTGCTGTAGGAGAGCTGGCCCCTGGTGGGTTCCTGAAACAGGTGTGTGAGGCACTGGGGATGGGGCCAGTGGTTGTGGTCAGTCCCTCCCTGAGTGGCATGTACTCCCTGCCCTTCCTCTTCCAGCACGAGGCTCTGGTCCGGGCTTACATCCCGGTGGCTCCCATCTGCACTGAGAAATTCACAGCAGAACAGTACAGCagcatacagACTCCATCTTTGATTGTCTATGGAGACCAGGATGCTCAGCTTGGAGAGGTTTCTCTGAACAACCTGAGGAGCCTGGCTAATCACAAGGTTGCGGTGATGAAAGGAGCAGGACATCCGTGCTACCTGGACGACCCGGCCACGTGGCACAGAGCTCTCACTGACTTTCTCAATACGTTGTGATGTTGTTCAGTGTCTTTGGGATATCTGTCCATGGATGCAGCACTATACGGCCATTCTTAATCCAACACTCCCAGCATTTAGTTATATAAACCAAAttgatactgtatgtttgttaattTGTCAAAAGCTAGTTtagattataatttttttaaatcaaagacTAGCGTGTGGTGTTTTGGAGACCTGTAACTGTGGTTCAGTACAATGCTCTTGCTGATATACTGTacttgtactgtgtgtgtgtgtgtggcctataCAGGATGTATGTACCTGACATGAGTCCTGGTATTACAAATGCAAAAACAAACACCACACAATGAAATGAAGTGAAAAATATGAACATTATTTAATaactgattctctgtaataaacaATTTGAAAATATTTTACAAGGAGTCACAGACACAATATTTTACAAATTTtgccctcttcttcttcttctttttttttagctTCATCAGTACAAAAGAATGGAGCGATGTGGACCAAtgcccagagagagggagctaaatcttccacgcacacacatacactcacacacaccaaaaatcaaatcaaaaacgGTTGATTTCAGATCTCAAACTTATCTTCACTTTATTCCTATTTTTTACTTCACTTAAAATTTGACAGattttactattttttttttcttttttgatatatatatatatattttacacatTTGGCAAACATGGTCACATAGCACCAGACTACAGAATCACATACGCGTCTTTCCCACAGAGACGCACCTACACGGACACAGCAAGGGTAAGGAAGGGCAGGGGAGGAGCCACGTGAAGACCCTCCCTTTGAGGCTGGCCGTAAAGTACACCACTTCCTCTCACCCCAAGCTgttcctattttttttatttttttgtgggggggggggggg

Function

NR:

description
protein ABHD14B

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0016787 hydrolase activity molecular_function

KEGG:

id description
K13706 ABHD14; abhydrolase domain-containing protein 14

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021609332.2 True 1678 mRNA 0.44 4 43027924 43035211

Neighbor

gene id symbol gene type direction distance location
LOC110527804 cssa22h3orf18 coding upstream 36560 42985660 ~ 42991364 (+)
rbp7b LOC106582767 coding upstream 92676 42932983 ~ 42935248 (+)
LOC110527799 LOC106582765 coding upstream 97290 42923547 ~ 42930634 (+)
LOC110527794 LOC106582762 coding upstream 144244 42854920 ~ 42883680 (+)
gnat1 LOC106582761 coding upstream 260528 42760386 ~ 42767396 (+)
LOC110527818 NA coding downstream 489476 43524687 ~ 43526668 (+)
LOC110528952 NA coding downstream 491720 43526931 ~ 43529047 (+)
mon1bb LOC106582805 coding downstream 501786 43536997 ~ 43545817 (+)
si:dkey-183j2.10 LOC106582807 coding downstream 532449 43567660 ~ 43582311 (+)
ppcs ppcs coding downstream 929266 43964477 ~ 43966869 (+)
G609532 NA non-coding upstream 7024 43017894 ~ 43020900 (+)
G609533 NA non-coding upstream 13262 43009544 ~ 43014662 (+)
G609484 NA non-coding upstream 32742 42991450 ~ 42995182 (+)
G609487 NA non-coding upstream 43779 42983706 ~ 42984145 (+)
G609506 NA non-coding upstream 65829 42960420 ~ 42962095 (+)
G609542 NA non-coding downstream 12666 43047877 ~ 43049711 (+)
G609573 NA non-coding downstream 71704 43106915 ~ 43167294 (+)
G609582 NA non-coding downstream 134072 43169283 ~ 43170138 (+)
G609642 NA non-coding downstream 226901 43262112 ~ 43262462 (+)
G610332 NA non-coding downstream 302741 43337952 ~ 43338163 (+)
G609436 NA other upstream 206679 42820956 ~ 42821245 (+)
G608390 LOC106582745 other upstream 1197116 41827211 ~ 41830808 (+)
G607904 NA other upstream 1564755 41462824 ~ 41463169 (+)
G606977 NA other upstream 2393485 40634181 ~ 40634439 (+)
LOC110527751 NA other upstream 2587292 40438879 ~ 40457742 (+)
G610436 NA other downstream 375180 43410391 ~ 43410806 (+)
G610563 LOC106582806 other downstream 548809 43584020 ~ 43584896 (+)
G610622 NA other downstream 793793 43829004 ~ 43831880 (+)
si:dkey-264d12.5 LOC106582817 other downstream 967413 44002556 ~ 44035143 (+)
G613664 NA other downstream 3243523 46278734 ~ 46279333 (+)

Expression


Co-expression Network