fam83e (LOC106582814)


Basic Information

Item Value
gene id fam83e
gene name LOC106582814
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 43979881 ~ 43985397 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021609363.2
TAGAACGCCTGCTGAGTGCGGGCCCCGAGGCCTTCTACACCACGCTGAGTGCAGAGCACCtcgtccccttcctctccccagaGGAGGTGAACCAGATCAGTGGCAGGGTCAAGGACTACCATAGCAGCTATGAGGAGTTGGAGGGGGCTGAGGAGGGTGGCAACTCAGGTGTGCAAGACCTCTCCGCCAGGTACTTCCCCACCCACTCAGACACCCCTGCACCGTGCCTGGAGCTGGGCTGGCCTGAGGGGGTCACCTGGGTGGGAATGGGACGCGCCATGGTCTACACCAGCCCACCTGCAGATGAACAACCTCCTGTCAGAGAGATCATCAGAAGACTACTGCAGGGGGCTAGCAAGAGTGTCTGCTGTACAGGTTGTTGCCAtggtgacagacagactgacagatagcACTGTGATTGGGGATCTACGCACTATCGCTTCCCGGGGAGTCCCTGTTTACATTGTCCTGAACCAGAGATCCAGCCAGGAGAACCTCCCCCCTCACAGGCTGAGGCATCCGAATATACAGGTTCGTGTTCTTGGAGGAAAGACCTTCTGTTCGCGGGAGGGAAAGATAGTGATGGGGGAATTGAAGGACAACTTCCTCCTGGTGGATTTGGAGACCGTGGTTAATGGCAGCTACAGCTTCACATGGTCAGACGCCCACCTGCACCGGCAGCTGGTGACGGTGCTGAGTGGCCCGGTAGTGGAATCCTTCGACCGAGAGTTCCGGATCCTCTTTGCAGCCTCACTTCCAGTTCCAGACACATGGAAGACCACCAAGGCCCCAATAGATGAGCCCCATCACCACTCAGTGCTCCTGGACCTCAACAACCGGCCCAAGTCTTTCCCCATGGAGCCTATCAACAGccaccctcctcccccacctgCAGACTACACCCTGGATTGGGAGGCCCTGGGCGTCATCCACAGAGGAAGTCCTGTCAATCAACACGGTGAACCCATGGACATGAATGTGAACATGGAGGAACCATTGCAACATTTTACAGCAGTGAACAAAAAGCCACCTTTTGGGGAGGAGTTTTGTCCGAAGGAAGTTGATCACCTCACAACTACGCATGCATACGAGGGGAGAATATGGGCCAACAATGTCAGTTCGGAGAGTGAAATTCAGCTGGATAATCAAACGACTTTTAACGGAGATTTACCCTCTCAGGAAGAGAACCAGCCGTCCGCTGAAACAGAAACCCAACACAGGGTCCAACTCAAAACATATGGCATACACCTCTCCAAACAGAGGAGCTCTGAAGTTGATGAGAAAGAGTCTGTGGGGCCCAGTGAAAACAAAATGGAGACAGGCCCACGAGAAGAAGCTGTGGGCTTTCCctccagagagagaagagatcgtCCAACTAGAAGGGAAGATGTTATGGCAGAGGAGTTAGGCACAGAGGCAACTGAATCTAGAGTCAACTCTGGTGCTGATAGCCCCTCTATATCTAGGAGACCTCTGATATTGAAGGTGCCTCAAAGTGAAAGCTTCAGCTCTTTGAGTGACATCATGAGGAGGCTGCGGCCTCGTCAGAGCTCTTCAACCCAGCTAAGGAGGGGTGCTAAGACCACCGTGTCAGAACTCAGCAGTTCCATGATGGACCTGAGTGTGATGCATACAGACGCAGGCTTTAAAGAGAAGGGACCATCAGTACCACAAGCCAGtTACTTTTCTGACCCTATTCGAATGACCCCAGCCTTCGCCCTGATGAGGAAGAGGAATGATGAGTTTAAAACGGGGATCCTTAGGCCTCCCAAAACCTTTCTGCCTCCTACCACCAGGCCTCGCAGTGGCAGTGTTGGACTCCAGAGGGACTGGAGAAGGCCACAGAGTGACTGGGATCTAGGGAAGGAGGATAGAAAGTGATTGAGTGAA
>XM_021609362.2
TTGGAACACAAGTTGACATGAGGATTTGAAAGTTGTCCGCTGTGCACTTCAGGGTAAGAAGTGGCGATTCTCTCGAGGAAACAGGGTCGTGACCCGATCGTGGCTGCGAGAGACTGAAAGGATCTGTCAGCAGAGCAGAACGcttggagcagagagagaggcaatgtgagcagagagagaggcaacgtgagcagagagagaggaggaaggtgagagtgagggaggagttgTACGAAAGGGGGAGGAAGAAGATAAGAGAATCTGTTATAAGTTGGAGGTAATCAGTCTTCATATTTTAGGACATGAAGTGTGAGTGTGAAGGGTGAGTTGTCTTTTTCTATCGCCACTATCATTATTTCATCGTTTTTAGTGGTTATGATCTCTTTAGTGATTATATATCATAACTCACTCAGAGCTATTTGTTCCTTACGTCAACAAGGACTTGTGACTTGTTTGTGAAAGGCTGGGAACTTTTTTTGCCTGTGTTTTCAAGATCGTTCCCTTGAAGATATATCGGTGTCCTTACCTTATTTAACTGATTCTGGACAATGCTTTCAATGAGATCTAATGCGAGAATCAAGATTCATTGGTGACTGCGTTTCTCTCAGAGTAAACAGAGGTAGTGAAAAGGAGACTTCTACCGCACACAATTGTCCAGTAACAAATAGCATATCATCACCAGCTAGTGTAATTGGTGTCATGATTTTGGCTGGACCTGTGCTGCCCTAGTAGTGCTTGTAGGTGGgggtgtaccccccccccccccccccccccgcagagTTCAAAAGACAACCCTCATTCCCAAAGACCGAGGAGGCTACACACTGTTCGGCCATGTCAAACTCCCAGGAACAGAGTCTGAATAAGGATGTGATATTTCTGCCGATGTCTGAGTCCAGCCCGGAGTACCTTCACTGCGAGAGGGAGCGCTATGCGCTAGAACGCCTGCTGAGTGCGGGCCCCGAGGCCTTCTACACCACGCTGAGTGCAGAGCACCtcgtccccttcctctccccagaGGAGGTGAACCAGATCAGTGGCAGGGTCAAGGACTACCATAGCAGCTATGAGGAGTTGGAGGGGGCTGAGGAGGGTGGCAACTCAGGTGTGCAAGACCTCTCCGCCAGGTACTTCCCCACCCACTCAGACACCCCTGCACCGTGCCTGGAGCTGGGCTGGCCTGAGGGGGTCACCTGGGTGGGAATGGGACGCGCCATGGTCTACACCAGCCCACCTGCAGATGAACAACCTCCTGTCAGAGAGATCATCAGAAGACTACTGCAGGGGGCTAGCAAGGTTGTTGCCAtggtgacagacagactgacagatagcACTGTGATTGGGGATCTACGCACTATCGCTTCCCGGGGAGTCCCTGTTTACATTGTCCTGAACCAGAGATCCAGCCAGGAGAACCTCCCCCCTCACAGGCTGAGGCATCCGAATATACAGGTTCGTGTTCTTGGAGGAAAGACCTTCTGTTCGCGGGAGGGAAAGATAGTGATGGGGGAATTGAAGGACAACTTCCTCCTGGTGGATTTGGAGACCGTGGTTAATGGCAGCTACAGCTTCACATGGTCAGACGCCCACCTGCACCGGCAGCTGGTGACGGTGCTGAGTGGCCCGGTAGTGGAATCCTTCGACCGAGAGTTCCGGATCCTCTTTGCAGCCTCACTTCCAGTTCCAGACACATGGAAGACCACCAAGGCCCCAATAGATGAGCCCCATCACCACTCAGTGCTCCTGGACCTCAACAACCGGCCCAAGTCTTTCCCCATGGAGCCTATCAACAGccaccctcctcccccacctgCAGACTACACCCTGGATTGGGAGGCCCTGGGCGTCATCCACAGAGGAAGTCCTGTCAATCAACACGGTGAACCCATGGACATGAATGTGAACATGGAGGAACCATTGCAACATTTTACAGCAGTGAACAAAAAGCCACCTTTTGGGGAGGAGTTTTGTCCGAAGGAAGTTGATCACCTCACAACTACGCATGCATACGAGGGGAGAATATGGGCCAACAATGTCAGTTCGGAGAGTGAAATTCAGCTGGATAATCAAACGACTTTTAACGGAGATTTACCCTCTCAGGAAGAGAACCAGCCGTCCGCTGAAACAGAAACCCAACACAGGGTCCAACTCAAAACATATGGCATACACCTCTCCAAACAGAGGAGCTCTGAAGTTGATGAGAAAGAGTCTGTGGGGCCCAGTGAAAACAAAATGGAGACAGGCCCACGAGAAGAAGCTGTGGGCTTTCCctccagagagagaagagatcgtCCAACTAGAAGGGAAGATGTTATGGCAGAGGAGTTAGGCACAGAGGCAACTGAATCTAGAGTCAACTCTGGTGCTGATAGCCCCTCTATATCTAGGAGACCTCTGATATTGAAGGTGCCTCAAAGTGAAAGCTTCAGCTCTTTGAGTGACATCATGAGGAGGCTGCGGCCTCGTCAGAGCTCTTCAACCCAGCTAAGGAGGGGTGCTAAGACCACCGTGTCAGAACTCAGCAGTTCCATGATGGACCTGAGTGTGATGCATACAGACGCAGGCTTTAAAGAGAAGGGACCATCAGTACCACAAGCCAGtTACTTTTCTGACCCTATTCGAATGACCCCAGCCTTCGCCCTGATGAGGAAGAGGAATGATGAGTTTAAAACGGGGATCCTTAGGCCTCCCAAAACCTTTCTGCCTCCTACCACCAGGCCTCGCAGTGGCAGTGTTGGACTCCAGAGGGACTGGAGAAGGCCACAGAGTGACTGGGATCTAGGGAAGGAGGATAGAAAGTGATTGAGTGAA

Function

NR:

description
uncharacterized protein LOC110527828 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021609363.2 False 1890 mRNA 0.54 9 43979881 43984460
XM_021609362.2 True 2811 mRNA 0.51 9 43979881 43985397

Neighbor

gene id symbol gene type direction distance location
utp3 utp3 coding downstream 2912 43968908 ~ 43976969 (-)
LOC110527824 LOC106582813 coding downstream 19337 43868780 ~ 43960544 (-)
prdm2b LOC106582809 coding downstream 130364 43831691 ~ 43849517 (-)
kaznb LOC106582810 coding downstream 155994 43663809 ~ 43823887 (-)
LOC110527821 LOC106582812 coding downstream 316231 43645370 ~ 43663650 (-)
si:dkey-264d12.4 LOC106582816 coding upstream 1891 43987288 ~ 44000565 (-)
LOC110527833 LOC106582820 coding upstream 71149 44056546 ~ 44069339 (-)
znf362a LOC106582819 coding upstream 86212 44071609 ~ 44083797 (-)
LOC110527835 LOC106582822 coding upstream 118437 44103834 ~ 44145967 (-)
tnfrsf1b LOC106582823 coding upstream 171661 44157058 ~ 44164433 (-)
G611275 NA non-coding downstream 211290 43768358 ~ 43768591 (-)
G611215 NA non-coding downstream 310960 43668413 ~ 43668921 (-)
G611214 NA non-coding downstream 312223 43666707 ~ 43667658 (-)
G611167 NA non-coding downstream 379763 43599887 ~ 43600118 (-)
G610579 NA non-coding downstream 502308 43477270 ~ 43477573 (-)
G611423 NA non-coding upstream 49099 44034496 ~ 44034844 (-)
LOC110527840 miip non-coding upstream 150788 44136185 ~ 44184204 (-)
G611470 NA non-coding upstream 203448 44188845 ~ 44191529 (-)
G611486 NA non-coding upstream 215151 44200548 ~ 44200845 (-)
G611489 NA non-coding upstream 220064 44205461 ~ 44205666 (-)
G610570 LOC106582807 other downstream 399917 43579093 ~ 43579964 (-)
LOC110527816 LOC106582802 other downstream 442916 43526691 ~ 43537037 (-)
LOC110527812 LOC106582796 other downstream 540968 43435578 ~ 43439076 (-)
G610183 NA other downstream 812561 43127811 ~ 43167320 (-)
G611674 NA other upstream 499458 44484855 ~ 44485752 (-)
G613411 LOC106582852 other upstream 1889568 45874965 ~ 45875700 (-)
LOC110527888 LOC106582868 other upstream 3282926 47260325 ~ 47284791 (-)
G616880 NA other upstream 4501650 48487047 ~ 48529168 (-)
G617624 LOC106582928 other upstream 5199027 49184424 ~ 49186096 (-)

Expression


Co-expression Network