mmel1 (LOC106582826)


Basic Information

Item Value
gene id mmel1
gene name LOC106582826
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 44215534 ~ 44261277 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021609387.2
ctttctttctccatctttttctctctctctctcactctttctctctctcactctttctctctctcactccctccctgagCTGCAAACTGGACCAGATAGTATCTCTCAAGCATCCAGCGCCACAGCGTCATTTCTTCACACACCAGCTCTGGGTGACAGCTCAGTAGGGGTGTTTGGGAAAACAGCTTGCTGTGAGAGACGTCTCAGGGAGTTCTACCGTCTAAATCCAGGTCACTTGAACGACTGGCATTGCACTGCATCACTTGACACAGCCCACTCACAAACGGGTACGCAGGCTCTCTGCCTGTACCCTGTCCCCTTCACTCTGCACGCTCATTTCCCAGAGAGCCCGGAGAGGTGAGAATGGGAAAATCCGAAAGCCAAATGGATATCATGGAAAAATCAACCAAACCAGTGAAGCGCCGTTGGACTGTTGTGGAAATCGTGCTATCTGTGCTGTTGTTGCTGGTCAGCTGTGCCCTAGCTGGACTGATAGTCCTCTACACTTCGGCTTTGAGAGAGCAATCTAATAGATCTGGTATGTCAAGGAGCTCAGTCACCGAGGGGCAGCAGTATCGTTCTGCCCCCAGCAATGTTTGCACAACTCCTGAGTGTGTTACTGCAGCTGCTCGTCTTCTGCAGAACATGGATGCAACGGTAGAGGCTTGTCAGAACTTCTACCAGTATGCCTGTGGGGGATGGCTGGAGCGCCATGTCATCCCAGAGACCAGCTCCCGCCACAGCGTCTTCGACATCCTCAGAGACAAGCTGGAGATCGtgcttaaagGAGTTTTTGAGACTGAGAGTGATCAGGACCGTGATGCCTTCAAGAAGGCCAAAACTCTCTACAGCTCCTGCATGAATGAGACTTTGATAGAGCAGCTCGACTCCAAGCCTCTCATGCATCTCATCGACAGCATAGGAGATTGGCCTGTTGCCTCAGAGGACTGGAACAGCGCTACAGAACAGGCTTGGAGCCTGGAAGATACTCTAGCCACCCTCAACTCTCATTACCACAAAAAGGTTATTCTGGACATGTATGTGTGGACGGATGACCGCGACTCCCGTCGCCACATTATCTACATTGACCAGCCAGGACTGGGAATGCCATCCAGAGATTATTACTTCAACGATGGAAACTACAAAAGGGTGCGAGAGGCCTACTTGCAGTTCATGGTTTCCATGGCGAGGATTGCCCGCGAGGACAGGAACTTGACCCAGGATGATGACCGTGTGGTGGAGGAAATGGTGCAGGTGCTGGATCTAGAGACAGATATAGCCAATGCCACATCCCCTGCAGAGGAACGTCAGGATGTCACGATTCTCTACAATAAGATGACCCTTAGTAAACTGCAGGAGTCCTTCAATCTCAACGGTTTTAACTGGACAAGGTTTGTGCGTGGAGTGTTGTCCAGCGTGGCTGTGGACCTACagcgagaggaggaggtggtggtctaCAGCTCTCCTTACTTGGAGAAGATGAACGACGTGCTTTCCAAACACACTGTCAGAACGTTGCAGAACTACCTTACCTGGCAGCTCGTCATGGAGAGAGTCAGCAGCCTGAGTCGCCGCTTCAAAGATGCCAGGGCACACTACAGAAAGgcaCTGTACGGGACCACCGTGGAAGAGGCACGGTGGAGAGACTGTGTGCGTTACGTCCAGGGCAGCATGGAGAACGCAGTGGGTGCTCTGTATGTGCGAGAGACCTTTGCTGGTGAGAGTAAACGCATGGTCAGTGACCTCATCAGTAAGATCCAGGAAGCGTACGTGGAGACACTTGAGGAGCTGAACTGGATGGATGACCAGTCTAAGGAGAAGGCAAGAGAGAAGGCCATGGCCATTAAGGAGCATATTGGCTATCCTGACCACATTCTGGAAGAGAGCAATCTGAAGCTTGACCAGGAGTATGCCCATCTGAACTTTAGTGAGGAGAACTACTTTGAGAACGTCCTTGAGAACCTGCAGGCTGAAGCACACAAGACTTTGAAGAAGCTGAGAGAGCCAGTCGACCCGGACATGTGGATCATTGGCGCTGCTGTTGTCAATGCTTTCTACTCGCCAAACAGAAACCAGATAGTATTCCCTGCCGGTATCCTGCAGCCTCCTTTCTTCAGTAAGCAGCAGCTCCAGGCCCTGAACTTTGGTGGAATAGGGATGGTTATTGGACATGAGATCACCCACGGGTTTGATGACAATGgCCGTAATTTTGACAAGGATGGTAACATGCTTAACTGGTGGAGTAATTATTCTGCTGAGCACTTTAAGGACCAGTCACAGTGCATGGTGCAACAATATGGCAACTTCAACTGGAAGCTTGCAGGAGGACAAAATGTCAGTGGAATTAGTACTTTGGGGGAGAACATCGCAGACAACGGAGGAGTTCGGCAAGCTTACAAGGCCTATATGAAgtgggtggagagagaaggagaagagcttCGTTTACCTGGTCTGGACATGGACCACAAGCAACTTTTTTTCCTTAACTTTGCCCAAGTATGGTGTGGTGCCTATCGGCCTGAATATGCCAGCCAGTGCATCAAGACTGACTCCCACAGTCCCCTGGAATACAGGGTACTCGGCTCCCTACAGAATTTTGGAGCATTCTCAGATGCATTCCAGTGCAAACCGGGTACTCCCATGAATCCTGAGATGAAATGTCGGGTGTGGTAGCCAGTTTGGGCTTTTCTCTACTCTTGTTATTTATTTCTTGACTTGGGGCAGCTAAACAAAAGAACATGCTTAACAACCACCTTGTGTTATACTGACACCAAAGAGGCATCCCGCTTTGGAGTATGTCCGATTGATTTACATGGCAGAAGATaagacatttacataagtgttacAGATTGGATGACTGACCAAACTACACCCTAGTATCACCACTTGAAGCAGACGTAAACTATGATGAGACAGGAAAAACACTTGGAATGCGTATATACTTATATGGCTACTCAACCTAAAGATGTTGTCTGTGGTTGAACAGTTTAGCTTGTTCTTGTTTACAAGTGGTTTTGTTGTATACATGCATACATCTGAAGCTCCTATGGACAATTGTGGGTGGTCAGTGGATACATGCATAGTCGGGCAAAAGTAGGACATTCCTAAGACCTTGTAGAATATGTTTGAGCCAAGCTGGCTTAATACGCTTTAACTGACTTTTTAAAGAATTTCCTAAACTCTTTGTTCTTTTTGCCAAGTCATTCAGATGGCAAATCCACAGCGCTTTTAAGCCCACATATTTAGTGGCTTTCATTTATGTGCAAAAAGTATATTTTGGTACTGAGTTGCCTGGTATGATCCTGTCTGATATGGAACATTTGTtttttaagacattttgccacagggCAAGAGGCAAAAGTGAATAATAAGTCTGACATTACAGTGTGACTATGAAATGAATAAAGGCTCTGTGAAAATGAAGAGCAGCGGTGACCTAGAGATGGACATAATTAGTCTCACTCCTAGGCTAAGGCTTGGCTGCGTCACTCTTTGAAATGAAACCATTTACCTGaagacatcagactgttaaaccttTGCAGCTTTAACCTTatatgaacatttaaaaaaaatataataataatggcTTAAAATGTTTTTGATATAGCATATATAAATGTGAGATCTACGAAGATAAATGCTTGGAAATAAGTTGAAATACTTGCTAGGCTAGCACGGTTTTGTTTGAGATTAATTTATAGTGATAATGATCTGCCATGGAGTGATCAGTGTCTTATTTATATTAGATACTCTATACTCGATCACAACTGAAAGTGATTTGACTTACTTGACTGACTTATTGTTGTGTTAAAGGATGTTTCAGAGACAGACATTTGATCAACAGTGTTTCTGATCTCGGGCTTTGTCCACACAGCACCAGTCAGCATTTGGGACTAGGATATGATCAGAAAGAAACGTTTAGAGGAGTGTTTTTCAAAAAGTGTATACAATGCTTTGTGTTTACGgcataaaataaaaaacagaacagAAAACTGTTCCCAGCATCCCGTAATAGTCATGGGGTTAGCGCCTACCAATAGTCCTGGCTTCGCCTACCAATAGTCCTGGGGTTGATACTTCATATAATGAGGAATGTGCAGCCATGTCTCCTTCCtccgtttaaaaaaatatatacagagaCAAATACAATCTTTACTTTTGGATCCGGATACCCCTTTCCATATTGGGCGTGCAAGAAATAGAGAAATGAAATAAAATATTATATTCCCCCCAAAAAAGGGATACTAGGCGTGACATTTTTTATGGTGTGGCTTGGATGTCTAAAATGCCAATATTTCAGATATCACTACGAGGTGTTTCCACAATAGTTTCCAGGACAGGCAACACATGTTCACAATTTGACAAAGACGTTTTTTTAGAAATGTCCATTGTTCATAATTCCTTACCCGTTGTTGTGTATCTTGCCATGATTGAACACATGCTCTTCTGAGAACATCTAAAAGCTAGAACTTCATTATTGTATGCAACCTTTGAGGCAAAATCCCATTGGCATATCCACACAGAAGTGGAACGTAGGTTTGAATAGAGAAGCAGGTGAAGGCCAGGTGAAGGGGCACGTCTTGATCTCTGCCATTGACTAGTGGCCCAGAGAAAGACTGTGCTGGTGCGTGTGTGGGGACAGTTGGGAGCCTGGTAACTAGCCGCTATAGGGGCCTCTTGGACAGACTTGACAGATTGACACTGGGGAAATAGCTTCTCATTAGAGAGTTCCCAGTCAAGGCCAGGAGTGTTATTTTCTACCTTGATTAACAACTAATGACAGCAGAACTAAAGGGCAGAACAGGAGAGAGCGACTGAGAAACTGACAACATGATCAAACAGATTGccatggtggtggaacagaggGGTTTGAAGCACTGCTGAGGAAAGAAAACACACATTGTTAAAAGCTCAACATTGTTATTGAGAAAATTCAGGATGCCTTTGTCAATTGAACATGACTGTTATGTCTGATCAGAGGCTGATTTAGTGAATGTTCATGGTACATGTATCTTGCCTTTGAAGCTTTATTTACAATCACTTTGCCTGTTTACTTCTTGTAATGGCTTGGATGTTGTACAGTGCAGTGCAGGGGATTCCAATAGCTGTGTTACTGGTGCCTGTTTCACTTGGGATGTGAGTGGTGAAGTAGTTTGCCAATCAAAGCGACTTGACAAGGAATTAAAATAACCAACAGTGACAATATAAAGATAACATCTAGATAAGCTACTTGGGTTGcttctcaaatagcaccctattccctatatagtacactactttgggATTTGTTGTTTGGTTGTCCATTTAAACAATCTGTTATAATGGTTTCCTCATGCACATAAGATTTAAACAATACCATTCGCACAAAATCAGTTTGAGAATTGTACATACCTCttacacattgacacacacacacaaaatagccTCTCCAACCTGTGATAGATATACATTCTGCCACCTGTATTCCTTAGACCATTAGAATCAAATACCCAAACTACAGCTATCTGCAATTGGATTTGTACTTTTCGTGCATAACTAGCTGATATAACTATAAACCTAAATGGaacacaaatcaaatatatttctgAAGCAACAATAAGATACCTTGTCAGTGCTGTGTGCTTCTCTGGTATTTACAGGTGAAAGCTCATGCTgctatataattatatatataaacAGCTATTTTTGCGACTCAATCTGTTATTAGCGCTATCAATTGGTTGTTTACCTGAGACGTTTCAAGTCTCTTTTTTCCAATGTTTTATTGTGATCATTTTAAAGAGCTATGGAGCTAAATCCTCACTTATCAAACTAGTGAGTCATTCAAGCTTGTGTTAAATGTTTGTGTACATCACAATGTTCTGAATTTGTGCCGTTTTGTGATAAAAATGCATATCGCATTGCATTAGTAATATGCaaattatgttactgtatatcttGGTGTAAAAACAAATGCTATGCTTATTGAAGATATTACGTAAATGGATTAAATTCACTTTTATCTAAGCATAA
>TU695507
CGAAGATAAATGCTTGGAAATAAGTTGAAATACTTGCTAGGCTAGCACGGTTTTGTTTGAGATTAATTTATAGTGATAATGATCTGCCATGGAGTGATCAGTGTCTTATTTATATTAGATACTCTATACTCGATCACAACTGAAAGTGATTTGACTTACTTGACTGACTTATTGTTGTTGCTTTGTGTTTACGgcataaaataaaaaacagaacagAAAACTGTTCCCAGCATCCCGTAATAGTCATGGGGTTAGCGCCTACCAATAGTCCTGGCTTCGCCTACCAATAGTCCTGGGGTTGATACTTCATATAATGAGGAATGTGCAGCCATGTCTCCTTCCtccgtttaaaaaaatatatacagagaCAAATACAATCTTTACTTTTGGATCCGGATACCCCTTTCCATATTGGGCGTGCAAGAAATAGAGAAATGAAATAAAATATTATATTCCCCCCAAAAAAGGGATACTAGGCGTGACATTTTTTATGGTGTGGCTTGGATGTCTAAAATGCCAATATTTCAGATATCACTACGAGGTGTTTCCACAATAGTTTCCAGGACAGGCAACACATGTTCACAATTTGACAAAGACGTTTTTTTAGAAATGTCCATTGTTCATAATTCCTTACCCGTTGTTGTGTATCTTGCCATGATTGAACACATGCTCTTCTGAGAACATCTAAAAGCTAGAACTTCATTATTGTATGCAACCTTTGAGGCAAAATCCCATTGGCATATCCACACAGAAGTGGAACGTAGGTTTGAATAGAGAAGCAGGTGAAGGCCAGGTGAAGGGGCACGTCTTGATCTCTGCCATTGACTAGTGGCCCAGAGAAAGACTGTGCTGGTGCGTGTGTGGGGACAGTTGGGAGCCTGGTAACTAGCCGCTATAGGGGCCTCTTGGACAGACTTGACAGATTGACACTGGGGAAATAGCTTCTCATTAGAGAGTTCCCAGTCAAGGCCAGGAGTGTTATTTTCTACCTTGATTAACAACTAATGACAGCAGAACTAAAGGGCAGAACAGGAGAGAGCGACTGAGAAACTGACAACATGATCAAACAGATTGccatggtggtggaacagaggGGTTTGAAGCACTGCTGAGGAAAGAAAACACACATTGTTAAAAGCTCAACATTGTTATTGAGAAAATTCAGGATGCCTTTGTCAATTGAACATGACTGTTATGTCTGATCAGAGGCTGATTTAGTGAATGTTCATGGTACATGTATCTTGCCTTTGAAGCTTTATTTACAATCACTTTGCCTGTTTACTTCTTGTAATGGCTTGGATGTTGTACAGTGCAGTGCAGGGGATTCCAATAGCTGTGTTACTGGTGCCTGTTTCACTTGGGATGTGAGTGGTGAAGTAGTTTGCCAATCAAAGCGACTTGACAAGGAATTAAAATAACCAACAGTGACAATATAAAGATAACATCTAGATAAGCTACTTGGGTTGcttctcaaatagcaccctattccctatatagtacactactttgggATTTGTTGTTTGGTTGTCCATTTAAACAATCTGTTATAATGGTTTCCTCATGCACATAAGATTTAAACAATACCATTCGCACAAAATCAGTTTGAGAATTGTACATACCTCttacacattgacacacacacacaaaatagccTCTCCAACCTGTGATAGATATACATTCTGCCACCTGTATTCCTTAGACCATTAGAATCAAATACCCAAACTACAGCTATCTGCAATTGGATTTGTACTTTTCGTGCATAACTAGCTGATATAACTATAAACCTAAATGGaacacaaatcaaatatatttctgAAGCAACAATAAGATACCTTGTCAGTGCTGTGTGCTTCTCTGGTATTTACAGGTGAAAGCTCATGCTgctatataattatatatataaacAGCTATTTTTGCGACTCAATCTGTTATTAGCGCTATCAATTGGTTGTTTACCTGAGACGTTTCAAGTCTCTTTTTTCCAATGTTTTATTGTGATCATTTTAAAGAGCTATGGAGCTAAATCCTCACTTATCAAACTAGTGAGTCATTCAAGCTTGTGTTAAATGTTTGTGTACATCACAATGTTCTGAATTTGTGCCGTTTTGTG

Function

NR:

description
PREDICTED: membrane metallo-endopeptidase-like 1

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0004222 metalloendopeptidase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021609387.2 False 6012 mRNA 0.44 24 44215534 44261277
TU695507 True 2110 lncRNA 0.39 2 44258894 44261147

Neighbor

gene id symbol gene type direction distance location
LOC110527839 NA coding upstream 37469 44164248 ~ 44178065 (+)
LOC110527834 LOC106582821 coding upstream 122999 44085865 ~ 44092535 (+)
si:dkey-264d12.5 LOC106582817 coding upstream 180391 44002556 ~ 44035143 (+)
ppcs ppcs coding upstream 248665 43964477 ~ 43966869 (+)
si:dkey-183j2.10 LOC106582807 coding upstream 633223 43567660 ~ 43582311 (+)
slc45a1 LOC106582828 coding downstream 15643 44276920 ~ 44290303 (+)
LOC110527111 LOC106582832 coding downstream 60362 44321639 ~ 44449234 (+)
LOC110527112 NA coding downstream 189309 44450586 ~ 44464197 (+)
LOC110527847 LOC106582833 coding downstream 206317 44467594 ~ 44524862 (+)
LOC110528955 LOC105009000 coding downstream 266633 44527910 ~ 44535089 (+)
G610972 NA non-coding upstream 5098 44210226 ~ 44210436 (+)
G610971 NA non-coding upstream 9018 44206312 ~ 44206516 (+)
G610967 NA non-coding upstream 13742 44201534 ~ 44201792 (+)
G610963 NA non-coding upstream 16744 44198519 ~ 44198790 (+)
G610958 NA non-coding upstream 29330 44185475 ~ 44186204 (+)
G611014 NA non-coding downstream 29999 44291276 ~ 44313030 (+)
G611043 NA non-coding downstream 87549 44348826 ~ 44349136 (+)
G611076 NA non-coding downstream 168554 44429831 ~ 44430066 (+)
G611077 NA non-coding downstream 174469 44435746 ~ 44435954 (+)
G611078 NA non-coding downstream 175801 44437078 ~ 44438380 (+)
G610622 NA other upstream 383654 43829004 ~ 43831880 (+)
G610563 LOC106582806 other upstream 630638 43584020 ~ 43584896 (+)
G610436 NA other upstream 804728 43410391 ~ 43410806 (+)
G609436 NA other upstream 1394289 42820956 ~ 42821245 (+)
G613664 NA other downstream 2017457 46278734 ~ 46279333 (+)
LOC110528958 NA other downstream 2370845 46629591 ~ 46638492 (+)
G615624 NA other downstream 3578111 47839388 ~ 47839722 (+)
G617133 NA other downstream 4565550 48826827 ~ 48827227 (+)
tafa4b LOC106583040 other downstream 5311043 49571790 ~ 49620194 (+)
G610992 NA non-coding upstream 17679 44240976 ~ 44241215 (+)
G610983 NA non-coding upstream 31912 44226391 ~ 44226982 (+)
G610982 NA non-coding upstream 32627 44226032 ~ 44226267 (+)
G610979 NA non-coding upstream 37262 44221217 ~ 44221632 (+)

Expression


Co-expression Network