mustn1b (mstn1)


Basic Information

Item Value
gene id mustn1b
gene name mstn1
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 49295040 ~ 49297305 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021609600.2
ACTGACTCACTCCCAGGGTCAATAAGAGAGAAGAGCCCCCTGAGGATCTCGGGGTATAAATATAATGGACTGGACAGAGAGGATCAGTCCAGACACACCGCACACAGCTCCACTGACCAGAACTCTGGGATTAAGACACAACCCACACACCATGTCTCAGCCCGTTGAGGTGAAGAAGAAGAAGCGTCCTGTGATGAAGGAGGAGGACTTGAAAGGAGCCCGCAGCAAACTGGGGCTAAAGGGCGAGCCCAAGAGTAAGACCTATGAGGTCATGGTAGAGTGTGAGCGTATGGGAAAGGTGGCTCCCTCAGTGTTCAGTGGGGTGAAGTCTGGAGGAGAGACTGTACTGGAGAAGCCTAAAGCCCCAGGAGCCAGCATCTTTGGCAAGTAGAGCCGTCCAGTGTGGAGTGTTGGCTATCATCACTGCGCTAGAGTCTAGAGGAGAGACGGGACAGACGCATCAATGGACAAACGGCAATGAAGAAGCCAAACCTTGAATGGTTTGATACCTGTTTTTCCATTTTCAGCACGGAAATAGGCCCATCTCTTTTTGAGCAGGTTGTTCATAGTAGGGTTTGTTCATACTGTATGATGACTGTTTATGATTGATTGAGAATTAAGGGAAATTCCAGCATCATGGATATGATATTTGCACACACAATGGAAAACAAAATGTCTCACATAGTTTACTGATCAGGTAGAAATGAAAGTGCTATCATGATTGCCTTACGCAGCAATGCTGACTGATCATGTTATGATCATGCCATTGATCATGTTATGACGTGTCTGTAACGGTCACATTCGTTACGCTTAGAACGAGTACCTACAGGAAGGAAACCAATTATACATCACATAAGCCCTTGATGAAGTTAGCTTTGCACAGAAAGTTTGTAAAATCATACTCAAAACATGTCCACAATAACAACCTTTCCTCAAAAACATTACAGTTGTGACACTGCCTGTCCAAATCAGCATTCTATCTTCACTAGACTGTAGAATTCTATACTAGCAATCAAAGGACAAAAATGTGTTTCATTAACCTTCCGGCTTGtcagaaacagagggacagatgtTAGTACCAAAACAAGTTCTGTGAGCCATTACCAAAGGCTATGAAATATGGTTGACTGAAAATACTTATTTTGAGACTTTGTAGCCTACTTTGTAGTAACATTAAATTTGGCAAATATAAAGGCCAAATGTAGTCTTTActttaaaatacacacattcaaatagaattttattggtcacatattttgcagatgttattgggggTGTAGCGAAAATATGGTTAATATTTTCTCTAAATATGAAAGTTTAATTAGGAAATAAGCTAGTTTTTCATGTTTGGGTTGACCTTACTATGAAGTTGCTCAAATTGTAAATGCTGAAATATTTGTCTTATGTTTTTATAAACAAATGAATGACTTCCCTACTTATTAATTCTGTATCCCATTGTTTGGAGTGTTAA
>TU702832
AAATATAATGGACTGGACAGAGAGGATCAGTCCAGACACACCGCACACAGCTCCACTGACCAGAACTCTGGGATTAAGACACAACCCACACACCATGTCTCAGCCCGTTGAGGTGAAGAAGAAGAAGCGTCCTGTGATGAAGGAGGAGGACTTGAAAGGAGCCCGCAGCAAACTGGGGCTAAAGGGCGAGCCCAAGAGTAAGACCTATGAGGTCATGGTAGAGTGTGAGCGTATGGGAAAGGTGGCTCCCTCAGTGTTCAGTGGGGTGAAGTCTGGAGGAGAGACTGTACTGGAGAAGCCTAAAGCCCCAGGAGCCAGCATCTTTGGCAAGTAGAGCCGTCCAGTGTGGAGTGTTGGCTATCATCACTGCGCTAGAGTCTAGAGGAGAGACGGGACAGACGCATCAATGGACAAACGGCAATGAAGAAGCCAAACCTTGAATGGTTTGATACCTGTTTTTCCATTTTCAGCACGGAAATAGGCCCATCTCTTTTTGAGCAGGTTGTTCATAGTAGGGTTTGTTCATACTGTATGATGACTGTTTATGATTGATTGAGAATTAAGGGAAATTCCAGCATCATGGATATGATATTTGCACACACAATGGAAAACAAAATGTCTCACATAGTTTACTGATCAGGTAGAAATGAAAGTGCTATCATGATTGCCTTACGCAGCAATGCTGACTGATCATGTTATGATCATGCCATTGATCATGTTATGACGTGTCTGTAACGGTCACATTCGTTACGCTTAGAACGAGTACCTACAGGAAGGAAACCAATTATACATCACATAAGCCCTTGATGAAGTTAGCTTTGCACAGAAAGTTTGTAAAATCATACTCAAAACATGTCCACAATAACAACCTTTCCTCAAAAACATTACAGTTGTGACACTGCCTGTCCAAATCAGCATTCTATCTTCACTAGACTGTAGAATTCTATACTAGCAATCAAAGGACAAAAATGTGTTTCATTAACCTTCCGGCTTGtcagaaacagagggacagatgtTAGTACCAAAACAAGTTCTGTGAGCCATTACCAAAGGCTATGAAATATGGTTGACTGAAAATACTTATTTTGAGACTTTGTAGCCTACTTTGTAGTAACATTAAATTTGGCAAATATAAAGGCCAAATGTAGTCTTTActttaaaatacacacattcaaatagaattttattggtcacatatt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021609600.2 False 1471 mRNA 0.41 3 49295040 49297305
TU702832 True 1199 TUCP 0.42 3 49295255 49297248

Neighbor

gene id symbol gene type direction distance location
LOC110527952 LOC106582936 coding downstream 5236 49275181 ~ 49289804 (-)
LOC110527948 LOC106582926 coding downstream 150887 49136688 ~ 49144153 (-)
LOC110527945 LOC106565815 coding downstream 177202 49115044 ~ 49117838 (-)
LOC110527944 NA coding downstream 206845 49083910 ~ 49088195 (-)
LOC110527937 LOC106582921 coding downstream 290204 48997764 ~ 49004836 (-)
LOC110527953 LOC106582935 coding upstream 5851 49303156 ~ 49317531 (-)
LOC110528962 LOC106582933 coding upstream 20279 49317584 ~ 49334930 (-)
LOC110527955 LOC100195900 coding upstream 45053 49342358 ~ 49380684 (-)
LOC110527956 LOC106583046 coding upstream 91732 49389037 ~ 49433382 (-)
LOC110527961 LOC106565835 coding upstream 362717 49660022 ~ 49936575 (-)
G617637 NA non-coding downstream 26907 49205572 ~ 49268133 (-)
G617628 NA non-coding downstream 103482 49191356 ~ 49191558 (-)
G617621 NA non-coding downstream 113469 49180790 ~ 49181571 (-)
G617618 LOC106582928 non-coding downstream 116943 49174363 ~ 49178097 (-)
G617617 LOC106582928 non-coding downstream 121583 49172440 ~ 49173457 (-)
G617650 NA non-coding upstream 1340 49298645 ~ 49301227 (-)
G617730 NA non-coding upstream 116821 49414126 ~ 49414400 (-)
G617875 NA non-coding upstream 245448 49542753 ~ 49542966 (-)
G617876 NA non-coding upstream 245722 49543027 ~ 49543236 (-)
G617877 tmf1 non-coding upstream 246015 49543320 ~ 49543686 (-)
G617632 NA other downstream 99070 49195604 ~ 49195970 (-)
G617624 LOC106582928 other downstream 108944 49184424 ~ 49186096 (-)
G616880 NA other downstream 765872 48487047 ~ 48529168 (-)
LOC110527888 LOC106582868 other downstream 2024969 47260325 ~ 47284791 (-)
G613411 LOC106582852 other downstream 3419340 45874965 ~ 45875700 (-)
LOC110527964 LOC106583033 other upstream 1007143 50300364 ~ 50306278 (-)
G619733 NA other upstream 1658966 50956271 ~ 50958540 (-)
G622985 NA other upstream 4008231 53305536 ~ 53322831 (-)
G625426 NA other upstream 5775174 55072479 ~ 55075396 (-)

Expression


Co-expression Network