Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110527119 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 49384302 ~ 49386132 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_002474075.2 | True | 385 | mRNA | 0.44 | 3 | 49384302 | 49386132 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| trnae-cuc-5 | NA | coding | upstream | 78728 | 49305503 ~ 49305574 (+) |
| trnae-cuc-4 | NA | coding | upstream | 85725 | 49297929 ~ 49301234 (+) |
| LOC110527950 | LOC106582928 | coding | upstream | 197333 | 49167003 ~ 49186969 (+) |
| LOC110527949 | LOC106582927 | coding | upstream | 230729 | 49148622 ~ 49153573 (+) |
| hmces | hmces | coding | upstream | 248550 | 49130079 ~ 49135752 (+) |
| LOC110527957 | uba3 | coding | downstream | 87394 | 49473526 ~ 49487883 (+) |
| nhe3 | nhe3 | coding | downstream | 129041 | 49515173 ~ 49534053 (+) |
| LOC110527958 | tmf1 | coding | downstream | 151057 | 49537189 ~ 49549801 (+) |
| LOC110527959 | LOC106583042 | coding | downstream | 163679 | 49549811 ~ 49565246 (+) |
| tafa4b | LOC106583040 | coding | downstream | 185658 | 49571790 ~ 49620194 (+) |
| G617383 | NA | non-coding | upstream | 39579 | 49342377 ~ 49344723 (+) |
| G617346 | NA | non-coding | upstream | 86684 | 49274883 ~ 49297618 (+) |
| G617347 | NA | non-coding | upstream | 94613 | 49287795 ~ 49289689 (+) |
| G617345 | LOC106582936 | non-coding | upstream | 99850 | 49275178 ~ 49284452 (+) |
| G617447 | NA | non-coding | downstream | 52653 | 49438785 ~ 49438992 (+) |
| G617763 | NA | non-coding | downstream | 65760 | 49451892 ~ 49452287 (+) |
| G617769 | NA | non-coding | downstream | 71273 | 49457405 ~ 49476811 (+) |
| G617811 | NA | non-coding | downstream | 153804 | 49539936 ~ 49540434 (+) |
| G617133 | NA | other | upstream | 557075 | 48826827 ~ 48827227 (+) |
| G615624 | NA | other | upstream | 1544580 | 47839388 ~ 47839722 (+) |
| LOC110528958 | NA | other | upstream | 2746348 | 46629591 ~ 46638492 (+) |
| G613664 | NA | other | upstream | 3104969 | 46278734 ~ 46279333 (+) |
| si:dkey-264d12.5 | LOC106582817 | other | upstream | 5356074 | 44002556 ~ 44035143 (+) |
| G618712 | LOC106583033 | other | downstream | 917298 | 50303430 ~ 50304232 (+) |
| LOC110527970 | LOC106583026 | other | downstream | 1574362 | 50960494 ~ 51079129 (+) |
| G621650 | NA | other | downstream | 3005216 | 52391348 ~ 52391633 (+) |
| G621695 | LOC106582949 | other | downstream | 3105036 | 52491168 ~ 52493240 (+) |
