LOC110527963 (LOC106583034)


Basic Information

Item Value
gene id LOC110527963
gene name LOC106583034
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 50279611 ~ 50300137 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021609615.2
AATTTGGTACCTTTTCAATAGATAAAGTTGCAACATTTAACAAATGTAGCTAGCAAGTTGACATGACGTCACTGAGTAAGGACATTCTAGTGACCTGGGTATTGAAAGATGGGACCATCAATGTCGGTCTGCATAAAATATAAACGACCAGAATCGATTGCCTAGTAAATCAAATTCATAGCCTTTTGGGAGTAGACTGTTCGAATTCATTCAATGAACCACCAGGGGGAAATGAGATGACACGTGTCTAAAAGCTTCTGAAAAGTACTATCAATTTGTTTCAGAAACTTTCAGGGTTGTCCTCGGAGTTCAAGTGCTGGGCTTTGTATTTTCGTGGTCAAGaaacatgtcccCTGCACCAGAATCTCCTCTGGGGTACATCCCCCCAGACGGGGGCTGGGGCTGGGTCGTGGTGTTTGGGGCCTTCATCTCCATTGGCTTCTCATATGCCTTCCCCAAAGCCCTCACAGTCTTCTTCAAAGACATCCAGCTGATCTTCGGTGCCTCCTACAGCCAGATAGCATGGATCTCCTCCATTATGCTGGCAGCCATGTATGCCGGTGGACCTATCAGCAGTATTCTGGTGAATCGCTATGGAAGCCGGCCTGTGGTCATAGCTGGTGGAGTGATGTGTGGCGTTGCTATGGTAACTGCTTCTTTCGGCAATACCATTACGCATTTGTACATATGCGTAGGAATCATTGGAGGGTTTGGACTCTCCTTTAACCTCCAGCCGTCCCTCACAATCATTGGGAAGTACTTCCAGGTCAAGAGGCCATTAGCCAATGGGCTGGCCATGGCAGGAAGTCCAGTCTTCCTCTGTACATTAGCACCTATCAACCAGTTCCTGTTTAACCACTTTGGCTGGAGGGGCAGTTTCTTCATCCTGGGAGCTCTGCTGCTCAACTGCTGTGTTGCCGGCTCTCTCATGAGGCCCATTTGTCCAAAGCCAACTGGAGGCCAACTCACGCAGACAAACGGATTCCCCAAGAAACCTCCCACGGACCAGTCTGAGGCCCAGGTGAATGGACACAACACACAGCGTGAGAAAGGCTGTATGGAAAACTTCAACAAGTTTCTGGACCTCTCACTCTTCAAGCACAGGGGCTTTCTGATCTACATCGTAGGGAACACAATGATGTTCTTTGGTTTCTTCGCCCCTGTAGTGTTCCTGGCCCCGTACGCCCGGAGCCATGGCTTTGATGAGTACTCCTccgccttcctcctctccatcatggGCTTCGTGGACATGTTTGCCAGGCCGGGGACTGGGCTGATAGCTAACACTAAGTGGATCAGGCCCAGGATCCAGTACTTCTTCAGCTTTGCCATAATTTATAATGGTATGTGCCACCTGTTGTGCCCCTTGGCCAGTGGGTACTGGGGGCTGGCGGCCTACTCAGTGTTCTTTGGTATAGCGTTTGGCATGGTGTGTGCCCTGCTGTTTGAGACACTCATGGACCTGGTGGGGCCTCAGCGGTTCTCCAGTGCAGTGGGACTGGCCACCATCATAGAGTGCGGCCCCGTGCTCCTGGGACCACCTATAGGAGGAGCCTTGGTGGACACCTTTGGTGACTACAAGTACCTGTACCTCATGTGTGGAGCGGTGATGGTGTTCGCAGGACTCTTCCTCTTTGTTATGAACGTCTACAACTACAGGATGCTGGAGCgggagaggaggcaggaggagggagaggtgaaggagggCTGTGAGAACCAGGAGCAGGGTATGTGGCTGTGTGAGAGGGGAGAGGCTTCCTCAGAGGAAAGAGCAGAAGAGCCTGAGTGTACGAAGGAACAAGACACCCAGGGAGACTGAAACATGCTATCCATCACAACAGTGTATACAAGCACACAATATTGATTTCAGTACATCAATGTATAGGCCTATCTCATATcccctccacccacacacacacatcctatttGATTCTGTTTATGTTGGTTCCTGTTAATGTGTTAACTCTACTACTAACCTTGGTGGAGTACACTCCTGTAGCTGTTTCCCCATGCTGACAAAGGCTGTTTGGAGAGAACTACTTCTGGCTGTATGAGATCAAATAGCAGTGTAATCCTTTCCGGAACGTTATTTATTTGAGCAGCCAGGTGTGCCACCCCCCCTGAGCAGTCCCAGCTAGTATCCAGTTTCTCGTGGTCAGGGACAACTCCAGGCTCTAATAATTCATTAGAAACAAAAAACACCTAATAAATCAATGTAAAGTTACATCGAGTGTTACTCTGTGAATTATGACCATTAAATACATACTTGATATCAATGATGAAACTGTGAACAAACATTTGCAGTTGAGAGGTTTGTCACATCTATGACGAGGATGtaatatttcagccttgtggtaGTCATGAACATTTCACTCTTCTGCCTGTATTGATGTTACAATGGGTGGATGAGGAATGCACTGTTACTGACATTATGATGTCATGTTATGCATCTTGTTCAGGATCCATTTTTCACTTATATGACCAAAAGAAGTGTCTGCTTTAAAATGTTCCCAAACAGATCATAGAATGAATGTAATGAACACGGATTCAGCTGTAATGAAGTTTACGATGACAATGTAATTCATGTCTAGGCTGTAGATTTGCATAAACTGTTTTGTTTTCTTTTAAAGATGCATTTATTGTTTTAAGATGCTAACTGGAAGGACTGTATTTGAAGGACTGTATCCAAAGGTAATATGATTGGGTAGAATACTCAGCAATAAATGCCACCATTCTTATTCA

Function

NR:

description
monocarboxylate transporter 2-like

GO:

id name namespace
GO:0055085 transmembrane transport biological_process
GO:0015711 organic anion transport biological_process
GO:0016021 integral component of membrane cellular_component
GO:0015355 secondary active monocarboxylate transmembrane transporter activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021609615.2 True 2742 mRNA 0.47 5 50279611 50300137

Neighbor

gene id symbol gene type direction distance location
LOC110527961 LOC106565835 coding downstream 343036 49660022 ~ 49936575 (-)
LOC110527956 LOC106583046 coding downstream 846229 49389037 ~ 49433382 (-)
LOC110527955 LOC100195900 coding downstream 898927 49342358 ~ 49380684 (-)
LOC110528962 LOC106582933 coding downstream 944681 49317584 ~ 49334930 (-)
LOC110527953 LOC106582935 coding downstream 962080 49303156 ~ 49317531 (-)
LOC110527964 LOC106583033 coding upstream 227 50300364 ~ 50306278 (-)
LOC110528963 NA coding upstream 209336 50509424 ~ 50540585 (-)
LOC118965294 NA coding upstream 637072 50937209 ~ 50939964 (-)
LOC118965295 NA coding upstream 787152 51087289 ~ 51091164 (-)
LOC110527971 LOC106583024 coding upstream 797320 51097457 ~ 51152020 (-)
G618867 NA non-coding downstream 44780 50234616 ~ 50234831 (-)
G618866 NA non-coding downstream 45228 50234101 ~ 50234383 (-)
G618748 NA non-coding downstream 186641 50092602 ~ 50092970 (-)
G618369 NA non-coding downstream 465419 49813729 ~ 49814192 (-)
G618912 NA non-coding upstream 12700 50312837 ~ 50313066 (-)
G618963 NA non-coding upstream 50456 50350593 ~ 50350882 (-)
G618969 NA non-coding upstream 52990 50353127 ~ 50353344 (-)
G619037 NA non-coding upstream 66857 50366994 ~ 50367204 (-)
mustn1b mstn1 other downstream 982363 49295040 ~ 49297305 (-)
G617632 NA other downstream 1083641 49195604 ~ 49195970 (-)
G617624 LOC106582928 other downstream 1093515 49184424 ~ 49186096 (-)
G616880 NA other downstream 1750443 48487047 ~ 48529168 (-)
G619733 NA other upstream 656134 50956271 ~ 50958540 (-)
G622985 NA other upstream 3005399 53305536 ~ 53322831 (-)
G625426 NA other upstream 4772342 55072479 ~ 55075396 (-)
G625472 LOC106582968 other upstream 4864355 55164492 ~ 55188756 (-)

Expression


Co-expression Network