LOC118965294


Basic Information

Item Value
gene id LOC118965294
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 50937209 ~ 50939964 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005052597.1
GCTGGAGGCCGGACGGGAGGATGGGGGGCATTCAGTCTCCTCCGGGCTGCGCCGGTTTCCAACCTCACAGAAAACTTCCCGCTCTTGAATTCCATTGCCACATGACGCTGAGCACTgaaacagaacagggcagaaGCTGCACACAACAGAAATACATCTGGAGGAAAATCCCAACATtggggagcaggtctcgaaccctcgaccttctagcccgaggtccggcgctcTATCGACTGTGCTGCAAAAGCATGCTccagcggcagagtcgatttccacgcttataaacccagggtcgttacaatactgTTAATCCTGATACTGTTTGTGCTTACATTTGAATTGGTTTTGTGCACCAACATTAATGGCAAACAGTGCATTTTCCTAAGGGAGCTTTTATGTTGTAAAGGCACATGAAGATCATTATTACACATGCCTTAATTGATTATAAAGTGTCTTAATTGATTATGTGTTTTTGAGTGAGTATTTGTGTGTGAGTTTGTCTATCTGTTAATGTgtatattattgtgtgtgtgtgtgtcgtgtgtgagtgagtttgtCTATCTGTTCATGTgtatattattgtgtgtgtgtgtgagtttgtctaTCTGTTAATGTgtatattattgtgtgtgtgtg

Function

NR:

description
A disintegrin and metalloproteinase with thrombospondin motifs 9

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005052597.1 True 636 mRNA 0.44 3 50937209 50939964

Neighbor

gene id symbol gene type direction distance location
LOC110528963 NA coding downstream 396624 50509424 ~ 50540585 (-)
LOC110527964 LOC106583033 coding downstream 630931 50300364 ~ 50306278 (-)
LOC110527963 LOC106583034 coding downstream 637072 50279611 ~ 50300137 (-)
LOC110527961 LOC106565835 coding downstream 1000634 49660022 ~ 49936575 (-)
LOC110527956 LOC106583046 coding downstream 1503827 49389037 ~ 49433382 (-)
LOC118965295 NA coding upstream 147325 51087289 ~ 51091164 (-)
LOC110527971 LOC106583024 coding upstream 157493 51097457 ~ 51152020 (-)
LOC110527973 synpr coding upstream 239239 51179203 ~ 51207209 (-)
ptprga LOC106583020 coding upstream 509067 51449031 ~ 51726478 (-)
LOC118965403 NA coding upstream 1513875 52453839 ~ 52453893 (-)
G619688 NA non-coding downstream 43393 50887023 ~ 50893816 (-)
G619602 NA non-coding downstream 84416 50852492 ~ 50852793 (-)
G619584 NA non-coding downstream 97680 50839292 ~ 50839529 (-)
G619478 LOC106583030 non-coding downstream 138612 50705082 ~ 50798597 (-)
G619514 NA non-coding downstream 183614 50753092 ~ 50753595 (-)
G619732 NA non-coding upstream 15500 50955464 ~ 50956197 (-)
G619833 NA non-coding upstream 57609 50997573 ~ 51037061 (-)
G619876 NA non-coding upstream 137922 51077886 ~ 51079089 (-)
G620130 NA non-coding upstream 310392 51250356 ~ 51250574 (-)
G620236 fezf2 non-coding upstream 491482 51431446 ~ 51432983 (-)
mustn1b mstn1 other downstream 1639961 49295040 ~ 49297305 (-)
G617632 NA other downstream 1741239 49195604 ~ 49195970 (-)
G617624 LOC106582928 other downstream 1751113 49184424 ~ 49186096 (-)
G619733 NA other upstream 16307 50956271 ~ 50958540 (-)
G622985 NA other upstream 2365572 53305536 ~ 53322831 (-)
G625426 NA other upstream 4132515 55072479 ~ 55075396 (-)
G625472 LOC106582968 other upstream 4224528 55164492 ~ 55188756 (-)
LOC110528020 LOC106582955 other upstream 4493492 55420466 ~ 55566988 (-)

Expression


Co-expression Network