LOC118965295


Basic Information

Item Value
gene id LOC118965295
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 51087289 ~ 51091164 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005052598.1
tgtatctttaaaatggtgcctaatacttgtatgcttgaaatttgatttatgagatttctgttgatttgtatttggcgccctgttatttcattggctgttggctaGCGGAACCCCAGTCTTAGACAGGTTAAGACATTTACAAAACACATTTATAGCTATAACTTAATTAATTGCTGTATAAAAGGGTCGTAACAATGCAATAGAGAGGTACAAATTAGACAAAAAACGGAATACCATGACTCAACTAAACAGGTTGTGCAGGCCTATAACTGCAATTGTAAAATGTTTAGTCTGTTTATGTTCTGTCTTCCAGACCCGTGGTAATGCTCTAGTCTCCTTAATCATTTAGCATATTCACTTGTGCTCAAATTAACACCTAACCTACTTCACCAGGCGTGTAGACATACTACTGGTGAAATGTCTGTCTCCTTAACCATGTCTGTCTGCTTGCAGTACATCcagagtgccttgctcaagagcacatcggcagatttttcacctacttggctctgggatttgaacaagcaacattttggttactgtcccaacactcttaaccgcttgGCTACCTGCCGTAGCCGTACCTGATAGATCAGTTTCTGTATGGATTCACTGCAGGTAGGCCTATGTGATATTGCACCTTCAATTTCATGCAGATCAGTTTAATTGAAGGATCATTATGCCATGGTAAAATAGAATCCCAGAATGACCTTGTGTTTTACAGCGATAATAACAATATATGTTTTAGTCTTGTTTGTGAACATCAGGTTTAGGAGGAAATATCCATGCAATATACCTGGGTGAGAGTTCACCCTAAAAGATAACGGCATGGTAACACTAACGTCAGCTACCTTTGACTCCATTGGTAAACTGTCAGGACAATTTGTTGGACTAAGGTAAGGTGCTATTTTTGAATTTCAACATTTCACTGAAAAAAATAAGCATCAAGCATCACACTAAACATGTAGTTATCAATTTGTGCCAAATCGGATATCCTGAATATGCTCTGACTTGAGGCTTTGTCTCAACTTTCTCAGAGAGATTCTTGGCTGTGAAAATAGCTGGAACATCCTACTGTGTGTTCCAACATGTTTCTCTGTGGTACAGCtgctgacaaaggcccttctttCCAGAAGACCCAAGATACTCATTGATAGAAAAGGGCAATGCAGAGGCATGCAAAAAAACTCTGCAGAGTCTGTGGGGTAGGGGTGAGGACAAgctggagatggaggagatggtgtTGGAGTACGCTGCCATAAAGGGTGAGGCCTCTAAGAGTCTACTGGAGCTGCTGAGAGACAGAAGCTTCCGATGGCAGCTCATCACCACGGTGGTGGTGTACAGCCGCATCCAGTTCTCTGGCATCATTGCAGAGCTGCTCAAGTCGTTCAGCTTCGTGCTGTTCACCTGCATGTGTCTGTTGGCGTCACTCTGTCTTCTTCTACCTACTGGAGACCAAGGGGAAAACCCTCCTGGAGATCTCAGGGAGTTTAAAAACATCACTCTCTGTGTAAAACCCCTCTCACATGACAAGACCCTGGAGACAAAGTTAGAAAAACTGTTGGAAGCAAAAGAACTGAGATGCATTATACTCAGTCTGAGTTGTTTAGTTTGTATTTTAGTATATATTTATACActgtgcattcacagccatataccATATTCAATAAAAACATGTAAAAGTGTTATATCTGAATGAGTTTTATGGACCGATTGAATATAATAAAATGCTTTTTA
>XR_005052599.1
tgtatctttaaaatggtgcctaatacttgtatgcttgaaatttgatttatgagatttctgttgatttgtatttggcgccctgttatttcattggctgttggctaGCGGAACCCCAGTCTTAGACAGGTTAAGACATTTACAAAACACATTTATAGCTATAACTTAATTAATTGCTGTATAAAAGGGTCGTAACAATGCAATAGAGAGGTACAAATTAGACAAAAAACGGAATACCATGACTCAACTAAACAGGTTGTGCAGGCCTATAACTGCAATTGTAAAATGTTTAGTCTGTTTATGTTCTGTCTTCCAGACCCGTGGTAATGCTCTAGTCTCCTTAATCATTTAGCATATTCACTTGTGCTCAAATTAACACCTAACCTACTTCACCAGGCGTGTAGACATACTACTGGTGAAATGTCTGTCTCCTTAACCATGTCTGTCTGCTTGCAGTACATCcagagtgccttgctcaagagcacatcggcagatttttcacctacttggctctgggatttgaacaagcaacattttggttactgtcccaacactcttaaccgcttgGCTACCTGCCGTAGCCGTACCTGATAGATCAGTTTCTGTATGGATTCACTGCAGTCTTGTTTGTGAACATCAGGTTTAGGAGGAAATATCCATGCAATATACCTGGGTGAGAGTTCACCCTAAAAGATAACGGCATGGTAACACTAACGTCAGCTACCTTTGACTCCATTGGTAAACTGTCAGGACAATTTGTTGGACTAAGGTAAGGTGCTATTTTTGAATTTCAACATTTCACTGAAAAAAATAAGCATCAAGCATCACACTAAACATGTAGTTATCAATTTGTGCCAAATCGGATATCCTGAATATGCTCTGACTTGAGGCTTTGTCTCAACTTTCTCAGAGAGATTCTTGGCTGTGAAAATAGCTGGAACATCCTACTGTGTGTTCCAACATGTTTCTCTGTGGTACAGCtgctgacaaaggcccttctttCCAGAAGACCCAAGATACTCATTGATAGAAAAGGGCAATGCAGAGGCATGCAAAAAAACTCTGCAGAGTCTGTGGGGTAGGGGTGAGGACAAgctggagatggaggagatggtgtTGGAGTACGCTGCCATAAAGGGTGAGGCCTCTAAGAGTCTACTGGAGCTGCTGAGAGACAGAAGCTTCCGATGGCAGCTCATCACCACGGTGGTGGTGTACAGCCGCATCCAGTTCTCTGGCATCATTGCAGAGCTGCTCAAGTCGTTCAGCTTCGTGCTGTTCACCTGCATGTGTCTGTTGGCGTCACTCTGTCTTCTTCTACCTACTGGAGACCAAGGGGAAAACCCTCCTGGAGATCTCAGGGAGTTTAAAAACATCACTCTCTGTGTAAAACCCCTCTCACATGACAAGACCCTGGAGACAAAGTTAGAAAAACTGTTGGAAGCAAAAGAACTGAGATGCATTATACTCAGTCTGAGTTGTTTAGTTTGTATTTTAGTATATATTTATACActgtgcattcacagccatataccATATTCAATAAAAACATGTAAAAGTGTTATATCTGAATGAGTTTTATGGACCGATTGAATATAATAAAATGCTTTTTA

Function

NR:

description
solute carrier family 2, facilitated glucose transporter member 9-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005052598.1 False 1740 mRNA 0.41 3 51087289 51091164
XR_005052599.1 True 1610 mRNA 0.41 4 51087289 51091164

Neighbor

gene id symbol gene type direction distance location
LOC118965294 NA coding downstream 147325 50937209 ~ 50939964 (-)
LOC110528963 NA coding downstream 546704 50509424 ~ 50540585 (-)
LOC110527964 LOC106583033 coding downstream 781011 50300364 ~ 50306278 (-)
LOC110527963 LOC106583034 coding downstream 787152 50279611 ~ 50300137 (-)
LOC110527961 LOC106565835 coding downstream 1150714 49660022 ~ 49936575 (-)
LOC110527971 LOC106583024 coding upstream 6293 51097457 ~ 51152020 (-)
LOC110527973 synpr coding upstream 88039 51179203 ~ 51207209 (-)
ptprga LOC106583020 coding upstream 357867 51449031 ~ 51726478 (-)
LOC118965403 NA coding upstream 1362675 52453839 ~ 52453893 (-)
camk1b LOC106583015 coding upstream 1492625 52583789 ~ 52658755 (-)
G619876 NA non-coding downstream 8200 51077886 ~ 51079089 (-)
G619833 NA non-coding downstream 50228 50997573 ~ 51037061 (-)
G619732 NA non-coding downstream 131092 50955464 ~ 50956197 (-)
G619688 NA non-coding downstream 193473 50887023 ~ 50893816 (-)
G619602 NA non-coding downstream 234496 50852492 ~ 50852793 (-)
G620130 NA non-coding upstream 159192 51250356 ~ 51250574 (-)
G620236 fezf2 non-coding upstream 340282 51431446 ~ 51432983 (-)
G620237 NA non-coding upstream 342178 51433342 ~ 51433733 (-)
G620500 NA non-coding upstream 421046 51512210 ~ 51512411 (-)
G620503 NA non-coding upstream 422957 51514121 ~ 51515552 (-)
G619733 NA other downstream 128749 50956271 ~ 50958540 (-)
mustn1b mstn1 other downstream 1790041 49295040 ~ 49297305 (-)
G617632 NA other downstream 1891319 49195604 ~ 49195970 (-)
G622985 NA other upstream 2214372 53305536 ~ 53322831 (-)
G625426 NA other upstream 3981315 55072479 ~ 55075396 (-)
G625472 LOC106582968 other upstream 4073328 55164492 ~ 55188756 (-)
LOC110528020 LOC106582955 other upstream 4342292 55420466 ~ 55566988 (-)
G627254 NA other upstream 5600159 56691323 ~ 56696091 (-)

Expression


Co-expression Network