camk1b (LOC106583015)



Basic Information


Item Value
gene id camk1b
gene name LOC106583015
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 52583789 ~ 52658755 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>NM_001124638.1
TTTTCCGCGAGCGACCCGAGTCCAACATTGGTGAAACAGTAAGAAAGGAACAACCTTTGAAATCGTACAAATCACAGtATTGTATCCAACCACCAGAAAAGAAAGATGCCTTTGGGTGACGATGGACATTCTTGGAAGAAGAAAACGTCAGATGTTAAGGAGAATTTCGACTTCAAGGAGATCCTGGGGACGGGGGCTTTCTCTGAGGTGGTCCTAGCGGAAGAGAAGAGGACACAGAAACTGGTGGCCATCAAATGCATCCCTAAGAAAGCCCTGGAAGGCAAAGAGAACAGCATAGAAAATGAGATCGCTGTCCTGCACAAgttAAAACATGCCAACATTGTCTCCCTGGAGGACATCTTTGAGAGTAAATCTCACCTCTACCTGGTTATGCAGCTgGTGTCTGGTGGGGAGCTGTTTGACAGGATAGTGGAGAAGGGCTTTTACACAGAGAAAGATGCCAGCAAGCTCATCCAGCAGATCCTGGACGCTGTCAAATACCTCCATGACATGGGCATCGTACACCGCGACCTGAAGCCGGAGAACCTTCTGTACTACAGTATGGAAGAGGACTCTAAGATCATGATCAGTGACTTTGGCCTGTCGAAGATTGAGGGATCTGGAAGTGTCATGTCCACAGCCTGCGGAACACCAGGATACGTTGCCCCTGAAGTATTGGCCCAGAAACCATACAGCAAGGCGGTGGACTGTTGGTCAATCGGTGTCATCGCCTACATCCTTTTGTGTGGATACCCGCCGTTCTATGACGAGAACGACGCCAAGCTTTTTGAGCAGATTATGAAGGCTGAATATGAGTTTGACTCTCCTTACTGGGACGATATCTCTGACTCAGCCAAAGACTTCATAGTCCACTTGATGGAGAAGGACCCCAGGATACGCTACACATGTGACCAGGCTCTGCAGCACCCCTGgATCGCTGGTGACACCGCTCTAGATAAGAACATCCATGAGTCTGTCAGTGCTCAGATAAGGAAGAACTTTGCCAAGAGCAAGTGGAGGCAAGCGTTTAATGCCACGGCGGTGGTGCGTCATATGAGGCGTCTGCAGCTGGGCACCAGTCAGGAGGCCGCCAGTCAGACCACCCTGCCCAGCCCTCTCAGAGCCCACCTGCTGCTGTCTGAGGCCACAGAAACAGAGGACACCACTGAGTCTCCGTGTGAGGGGGGCTGCTCCCAGAGTGCTGATGGGGGGGCGGAGCGCGACCACCTCTCCAACTGCACCTACCGCTGCCATCCAACCAGCCGGGTCTGATCCCTGCACACGCAGGCCACGCGAGGCCAACCAATGACTTTCCCATTTACCTCTGGAGACCAGAGAACTCCCTTGTCTGGCCAGAAATACAGAGTTGTTCCAGCAACCCGCCACCAGGAGGGGCAGGCAGGTTATGAATccagggtggggaggagggactCGATGTCAACAGAGGAGGTCATTTGAACGAATTGGGTGAGAGTGGAGGATGAGATGAGAGGGTAGAAGAAAGGAAAGGAGGAGAACATTGAGAAAGAGAGGTGTGGTGCCCAGAATAATCCTGGCTCATATATTTTGGAAGCAGGACAGAGCTTGGACAGGGTTTTACTCATCCTTTTAAAATGTGCGTCTGCTTTTTATATCTCTGCATTCATGTGCATGGTGTTTTCTATCTTCATTGTCTTTCCACTTTGACAGAATCCATGGATGATTTCTGCATGATGAGGTGACAGGTCCCCTTGCATGTTGGCGGCAGGTGTTTTATAGCGTGAAGAGTCTATTGCAAAATCGTGTATGGTGGTAATCATTATGTTATAGTTCCTGTACTGCAGATACACATCTTTATGACCTTAATGATGTTAGTCCTTCAGCATTACATTTGTATGGCTTTGTTGTATCTTaatattatttttatatataaatgtAGCCCTAGAAGCATTCACCTAATACCACATCTGGATAATCAATGTGAGAATACTCCATCCATTGGGCTAGTATACAGTAGACCCAGCATTTAGCTAGATCTgttctttcttcttttttttatcaGCATGGTTGTGTTTCACAACTGTAAGTTTGAGGTTGTGCTCCCACCACAGGCTTGTAACAGAATAAGGCTTTCTGATTTTAACAAATTCAGCACAGGGACTTCTTCTCTATGCTGCCTTTAGAACAGTGTCAAATGTTTCTTTTCTGGTGGCTTTTAGAAATCTGAAGATACGTCTCTATATCTCTGCACAGTTGAAGGAGCATTAGCAGCTATTTAATTTCTATCGTTGTAtgtttgtatatatttcaatgtGGCAATTCTATCGTTAAATACAGACTTTCACCTCGGTCCAGATCTGTCCAGATCGCTTTTCCAGTTGAGAAGTGTAATACCCTGGAGATAGACTTACATACATAGCCATTCCTCTTAGTACTAGTTAATACTTCATTTTTTCAAGCCTTTGTATCTGTACAGAGAGAACTTGAATTAAAGAATGTAAATATA

Function


NR:

description
PREDICTED: calcium/calmodulin-dependent protein kinase type 1-like isoform X1

GO: NA

KEGG:

id description
K08794 CAMK1; calcium/calmodulin-dependent protein kinase I

RNA


RNA id representative length rna type GC content exon number start site end site
NM_001124638.1 True 2485 mRNA 0.47 12 52583789 52658755

Neighbor


gene id symbol gene type direction distance location
LOC118965403 NA coding downstream 129896 52453839 ~ 52453893 (-)
ptprga LOC106583020 coding downstream 857311 51449031 ~ 51726478 (-)
LOC110527973 synpr coding downstream 1376580 51179203 ~ 51207209 (-)
LOC110527971 LOC106583024 coding downstream 1431769 51097457 ~ 51152020 (-)
LOC118965295 NA coding downstream 1492625 51087289 ~ 51091164 (-)
spcs1 spcs1 coding upstream 10697 52669452 ~ 52672489 (-)
gnl3 LOC106583012 coding upstream 32586 52691341 ~ 52696843 (-)
LOC118965419 NA coding upstream 33357 52692112 ~ 52692187 (-)
LOC118965421 NA coding upstream 33690 52692445 ~ 52692518 (-)
LOC118965420 NA coding upstream 34270 52693025 ~ 52693099 (-)
G621993 NA non-coding downstream 21029 52562549 ~ 52562760 (-)
G621988 NA non-coding downstream 26233 52557243 ~ 52557556 (-)
G621955 NA non-coding downstream 76818 52506727 ~ 52506971 (-)
G621946 NA non-coding downstream 85322 52498163 ~ 52498467 (-)
G621918 LOC106583019 non-coding downstream 94290 52481627 ~ 52489499 (-)
G622061 NA non-coding upstream 14268 52673023 ~ 52674718 (-)
G622088 NA non-coding upstream 61986 52720741 ~ 52720961 (-)
G622357 NA non-coding upstream 190138 52848893 ~ 52857351 (-)
G622358 NA non-coding upstream 190928 52849683 ~ 52857693 (-)
G619733 NA other downstream 1625249 50956271 ~ 50958540 (-)
LOC110527964 LOC106583033 other downstream 2277633 50300364 ~ 50306278 (-)
LOC110527961 LOC106565835 other downstream 2647508 49660022 ~ 49936575 (-)
mustn1b mstn1 other downstream 3286541 49295040 ~ 49297305 (-)
G617632 NA other downstream 3387819 49195604 ~ 49195970 (-)
G622985 NA other upstream 646781 53305536 ~ 53322831 (-)
G625426 NA other upstream 2413724 55072479 ~ 55075396 (-)
G625472 LOC106582968 other upstream 2505737 55164492 ~ 55188756 (-)
LOC110528020 LOC106582955 other upstream 2774701 55420466 ~ 55566988 (-)
G627254 NA other upstream 4032568 56691323 ~ 56696091 (-)

Expression



Co-expression Network