Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118965419 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 52692112 ~ 52692187 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005052745.1 | True | 76 | mRNA | 0.43 | 1 | 52692112 | 52692187 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| spcs1 | spcs1 | coding | downstream | 19656 | 52669452 ~ 52672489 (-) |
| camk1b | LOC106583015 | coding | downstream | 33357 | 52583789 ~ 52658755 (-) |
| LOC118965403 | NA | coding | downstream | 238219 | 52453839 ~ 52453893 (-) |
| ptprga | LOC106583020 | coding | downstream | 965634 | 51449031 ~ 51726478 (-) |
| LOC110527973 | synpr | coding | downstream | 1484903 | 51179203 ~ 51207209 (-) |
| LOC118965421 | NA | coding | upstream | 258 | 52692445 ~ 52692518 (-) |
| LOC118965420 | NA | coding | upstream | 838 | 52693025 ~ 52693099 (-) |
| LOC118965422 | NA | coding | upstream | 1757 | 52693944 ~ 52694019 (-) |
| LOC118965418 | NA | coding | upstream | 2215 | 52694402 ~ 52694476 (-) |
| LOC110527983 | LOC106583010 | coding | upstream | 93480 | 52785667 ~ 52841769 (-) |
| G622061 | NA | non-coding | downstream | 17394 | 52673023 ~ 52674718 (-) |
| G621993 | NA | non-coding | downstream | 129352 | 52562549 ~ 52562760 (-) |
| G621988 | NA | non-coding | downstream | 134556 | 52557243 ~ 52557556 (-) |
| G621955 | NA | non-coding | downstream | 185141 | 52506727 ~ 52506971 (-) |
| G622088 | NA | non-coding | upstream | 28554 | 52720741 ~ 52720961 (-) |
| G622357 | NA | non-coding | upstream | 156706 | 52848893 ~ 52857351 (-) |
| G622358 | NA | non-coding | upstream | 157496 | 52849683 ~ 52857693 (-) |
| G622359 | NA | non-coding | upstream | 158304 | 52850491 ~ 52858404 (-) |
| G622362 | NA | non-coding | upstream | 167764 | 52859951 ~ 52860161 (-) |
| G619733 | NA | other | downstream | 1733572 | 50956271 ~ 50958540 (-) |
| LOC110527964 | LOC106583033 | other | downstream | 2385956 | 50300364 ~ 50306278 (-) |
| LOC110527961 | LOC106565835 | other | downstream | 2755831 | 49660022 ~ 49936575 (-) |
| mustn1b | mstn1 | other | downstream | 3394864 | 49295040 ~ 49297305 (-) |
| G617632 | NA | other | downstream | 3496142 | 49195604 ~ 49195970 (-) |
| G622985 | NA | other | upstream | 613349 | 53305536 ~ 53322831 (-) |
| G625426 | NA | other | upstream | 2380292 | 55072479 ~ 55075396 (-) |
| G625472 | LOC106582968 | other | upstream | 2472305 | 55164492 ~ 55188756 (-) |
| LOC110528020 | LOC106582955 | other | upstream | 2741269 | 55420466 ~ 55566988 (-) |
| G627254 | NA | other | upstream | 3999136 | 56691323 ~ 56696091 (-) |
