Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110528966 |
| gene name | LOC106582980 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 54194715 ~ 54198212 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: kelch domain-containing protein 7A-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036983545.1 | False | 3497 | mRNA | 0.46 | 2 | 54194715 | 54198212 |
| TU709420 | False | 706 | lncRNA | 0.51 | 1 | 54195814 | 54196519 |
| TU709434 | False | 353 | lncRNA | 0.51 | 1 | 54196767 | 54197119 |
| TU709435 | False | 264 | lncRNA | 0.54 | 1 | 54197201 | 54197464 |
| TU709437 | False | 255 | lncRNA | 0.47 | 1 | 54197545 | 54197799 |
| TU709438 | True | 218 | lncRNA | 0.55 | 1 | 54197884 | 54198101 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110528002 | LOC106582983 | coding | downstream | 14311 | 54166551 ~ 54180404 (-) |
| LOC110527124 | LOC106582988 | coding | downstream | 359386 | 53820460 ~ 53835329 (-) |
| LOC110527121 | LOC106582947 | coding | downstream | 419204 | 53774355 ~ 53775511 (-) |
| LOC110527999 | LOC106582948 | coding | downstream | 422835 | 53766066 ~ 53771880 (-) |
| LOC110527997 | LOC106582992 | coding | downstream | 461927 | 53704724 ~ 53732788 (-) |
| LOC110528004 | LOC106582978 | coding | upstream | 4462 | 54202674 ~ 54485213 (-) |
| LOC110528967 | LOC106565901 | coding | upstream | 609437 | 54807649 ~ 54961056 (-) |
| LOC110528005 | LOC106582976 | coding | upstream | 800229 | 54998441 ~ 55036498 (-) |
| LOC110528006 | LOC106582975 | coding | upstream | 849081 | 55047293 ~ 55052787 (-) |
| LOC110528008 | atrap | coding | upstream | 881772 | 55079890 ~ 55101228 (-) |
| G623771 | NA | non-coding | downstream | 2794 | 54190835 ~ 54191921 (-) |
| G623767 | NA | non-coding | downstream | 7919 | 54185421 ~ 54186796 (-) |
| G623746 | NA | non-coding | downstream | 34770 | 54159656 ~ 54159945 (-) |
| G623716 | NA | non-coding | downstream | 43977 | 54150494 ~ 54150738 (-) |
| G623592 | NA | non-coding | downstream | 135806 | 54058636 ~ 54058909 (-) |
| G624025 | NA | non-coding | upstream | 64468 | 54262680 ~ 54264094 (-) |
| G624055 | NA | non-coding | upstream | 134337 | 54332549 ~ 54332911 (-) |
| G624191 | LOC100136012 | non-coding | upstream | 303410 | 54501622 ~ 54501860 (-) |
| G624276 | NA | non-coding | upstream | 323718 | 54521930 ~ 54563391 (-) |
| G624326 | NA | non-coding | upstream | 383369 | 54581581 ~ 54581817 (-) |
| G622985 | NA | other | downstream | 871884 | 53305536 ~ 53322831 (-) |
| G619733 | NA | other | downstream | 3236175 | 50956271 ~ 50958540 (-) |
| LOC110527964 | LOC106583033 | other | downstream | 3888559 | 50300364 ~ 50306278 (-) |
| LOC110527961 | LOC106565835 | other | downstream | 4258434 | 49660022 ~ 49936575 (-) |
| mustn1b | mstn1 | other | downstream | 4897467 | 49295040 ~ 49297305 (-) |
| G625426 | NA | other | upstream | 874267 | 55072479 ~ 55075396 (-) |
| G625472 | LOC106582968 | other | upstream | 966280 | 55164492 ~ 55188756 (-) |
| LOC110528020 | LOC106582955 | other | upstream | 1235244 | 55420466 ~ 55566988 (-) |
| G627254 | NA | other | upstream | 2493111 | 56691323 ~ 56696091 (-) |
| G627314 | NA | other | upstream | 2636373 | 56834350 ~ 56835092 (-) |
