LOC118965301


Basic Information

Item Value
gene id LOC118965301
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 55644983 ~ 55649872 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005052613.1
GTCACCTTCAGTTCTCTCAAATGCATCTCATCTTGAATGTTGTTGTTGACGTTGATTTAGTTCTCTCCTGTATTCCTCCTTCTATGTCATGAAATAACAAACCAGTACAAATAGACTCACCATCATGATGGAAAttataatgttatattatggGTTTTCAGACAGCATCTGTCCAGAGGAGATATGTTTGTGTGTTGGTATATGTGAGCTATTTTCTCTGGTGTCTGGTACTGATGGGCTACCCGTTACTGGTAAAGAGGACAACATTCTGTGATTCCCAGTAAATGGTCTGTGTTGGCCAACTACCAAGTCTGTAATGGAATCCTGCCGACAGGTGCACCCATCCCAATCCCGTAACGTTTTCCCATTACGGCCGCTGGAAAAGCCATCCACACCGGCACAGGGGTTGTTGTCATGTGGGATATAAGTTTGGCTAGTTTGAGAGAGAGGCACTAGCTATGtcaaggggtggggtggggggttaaGCTGTGGCTGGGCCAGAGTTATGAGAGCAGATTTGTTGTGTTGGTCCTGTTTCATTTGGTGTAACAGCAGGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCAGGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATTAGCAGGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCATGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCATGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCATGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCAGGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCATGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCATGTTTTGGATAGAGGCCAGGAGTATGAAGTGGAGGCAGGGAACAGAAATATCAGCAGGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCAGGTGTTGGATAGAGGACAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCATGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATGTCAGCATGTGTTGGATAGAGGCCAGGTGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCATGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCATGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCAGGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCAGGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCAGGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCAGGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGACAGGGAACAGAAATATCAGCAGGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCAGGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCAGGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCAGGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGACAGGGAACTGAAATATCAGCAGGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCAGGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCAGGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCAGGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGGACTGAAATATCAGCAGGTGTTGGATAGAGGACAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCATGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATGTCAGCATGTGTTGGATAGAGGCCAGGTGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCATGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCATGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCATGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCATGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAAAAATATCAGCATGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCAGGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCAGGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCAGGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCAGGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGACAGGGAACAGAAATATCAGCAGGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCAGGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCAGGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCAGGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGACAGGGAACTGAAATATCAGCAGGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCAGGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCAGGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCAGGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGGACTGAAATATCAGCAGGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCATGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCAGGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCATGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCAGGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCAGGTGTTGGATAGAGGCCAGGGGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCAGGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCATGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCAGGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCATGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCAGGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCATGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCAGGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGACAGGGAACAGAAATATCAGCATGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAAAAATATCAGCAGCGACTGAAAACATTAGTATTGCTTTTTTTGATGGAGGGAATTTTGTGTCAATCACCTGGAACTCTCTTGCTTTGAAGACCTGAGAGGATTTTCATTCACAACAAATAGTTCCCAAACTTTTCATTTGTGAAACATATTTTGGAAGTCTTCACCATATACTCACAATGACATACAAACTATAAGTGGCACGCCTGctcccactacccctccaccaGGCTACCCGTCATAATACTCACCTGTTAACATCATTACGCGCAgctgcgctcattggactcacctggactccctcACTGTGTTGATTACCCCTGTGTATATGTCTGCTCCTCTGTGTTGTTCCCTGTAGTAGTATTGTTTGTCGTGTCGTCTTTATGTCCAGACGCAGTTCCTGTTCTGTTGCATGTCTGTCTATATTAAATGGATCACTCcatgtacctgcttctcatctcctgtGCTG
>XR_005052612.1
GACGTCACCTTCAGTTCTCTCAAATGCATCTCATCTTGAATGTTGTTGTTGACGTTGATTTAGTTCTCTCCTGTATTCCTCCTTCTATGTCATGAAATAACAAACCAGTACAAATAGACTCACCATCATGATGGAAAttataatgttatattatggGTTTTCAGACAGCATCTGTCCAGAGGAGATATGTTTGTGTGTTGGTATATGTGAGCTATTTTCTCTGGTGTCTGGTACTGATGGGCTACCCGTTACTGGTAAAGAGGACAACATTCTGTGATTCCCAGTAAATGGTCTGTGTTGGCCAACTACCAAGTCTGTAATGGAATCCTGCCGACAGGTGCACCCATCCCAATCCCGTAACGTTTTCCCATTACGGCCGCTGGAAAAGCCATCCACACCGGCACAGGGGTTGTTGTCATGTGGGATATAAGTTTGGCTAGTTTGAGAGAGAGGCACTAGCTATGtcaaggggtggggtggggggttaaGCTGTGGCTGGGCCAGAGTTATGAGAGCAGATTTGTTGTGTTGGTCCTGTTTCATTTGGTGTAACAGCAGGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCAGGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATTAGCAGGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCATGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCATGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCATGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCAGGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCATGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCATGTTTTGGATAGAGGCCAGGAGTATGAAGTGGAGGCAGGGAACAGAAATATCAGCAGGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCAGGTGTTGGATAGAGGACAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCATGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATGTCAGCATGTGTTGGATAGAGGCCAGGTGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCATGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCATGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCATGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCATGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAAAAATATCAGCATGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCAGGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCAGGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCAGGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCAGGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGACAGGGAACAGAAATATCAGCAGGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCAGGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCAGGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCAGGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGACAGGGAACTGAAATATCAGCAGGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCAGGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCAGGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCAGGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGGACTGAAATATCAGCAGGTGTTGGATAGAGGACAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCATGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATGTCAGCATGTGTTGGATAGAGGCCAGGTGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCATGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCATGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCATGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCATGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAAAAATATCAGCATGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCAGGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCAGGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCAGGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCAGGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGACAGGGAACAGAAATATCAGCAGGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCAGGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCAGGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCAGGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGACAGGGAACTGAAATATCAGCAGGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCAGGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCAGGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCAGGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGGACTGAAATATCAGCAGGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCATGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCAGGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCATGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCAGGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCAGGTGTTGGATAGAGGCCAGGGGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCAGGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCATGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCAGGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCATGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCAGGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCATGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAGAAATATCAGCAGGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGACAGGGAACAGAAATATCAGCATGTGTTGGATAGAGGCCAGGAGTATGAGGTGGAGGCAGGGAACAAAAATATCAGCAGCGACTGAAAACATTAGTATTGCTTTTTTTGATGGAGGGAATTTTGTGTCAATCACCTGGAACTCTCTTGCTTTGAAGACCTGAGAGGATTTTCATTCACAACAAATAGTTCCCAAACTTTTCATTTGTGAAACATATTTTGGAAGTCTTCACCATATACTCACAATGACATACAAACTATAAGTGGCACGCCTGctcccactacccctccaccaGGCTACCCGTCATAATACTCACCTGTTAACATCATTACGCGCAgctgcgctcattggactcacctggactccctcACTGTGTTGATTACCCCTGTGTATATGTCTGCTCCTCTGTGTTGTTCCCTGTAGTAGTATTGTTTGTCGTGTCGTCTTTATGTCCAGACGCAGTTCCTGTTCTGTTGCATGTCTGTCTATATTAAATGGATCACTCcatgtacctgcttctcatctcctgtGCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005052613.1 False 4425 mRNA 0.49 3 55644983 55649869
XR_005052612.1 True 4596 mRNA 0.49 3 55644983 55649872

Neighbor

gene id symbol gene type direction distance location
LOC110528021 dj-1 coding downstream 73256 55567122 ~ 55571727 (-)
LOC110528020 LOC106582955 coding downstream 77995 55420466 ~ 55566988 (-)
LOC110528018 LOC106582958 coding downstream 335857 55228600 ~ 55309126 (-)
LOC118965300 NA coding downstream 352162 55290527 ~ 55292821 (-)
LOC110528017 LOC106582961 coding downstream 419056 55209582 ~ 55225927 (-)
LOC110528023 errfi coding upstream 77557 55727429 ~ 55735021 (-)
tfeb LOC106583139 coding upstream 832501 56482373 ~ 56593011 (-)
tmem183a tmem183a coding upstream 949371 56599243 ~ 56604594 (-)
myog tmyogenin coding upstream 1067004 56716876 ~ 56720187 (-)
mdm4 mdm4 coding upstream 1107194 56757066 ~ 56772426 (-)
G625651 NA non-coding downstream 139582 55505172 ~ 55505401 (-)
G625649 NA non-coding downstream 144549 55500199 ~ 55500434 (-)
G625645 NA non-coding downstream 149415 55495361 ~ 55495568 (-)
G625641 NA non-coding downstream 161811 55482854 ~ 55483172 (-)
G625632 NA non-coding downstream 175768 55468920 ~ 55469215 (-)
G625805 NA non-coding upstream 143093 55792965 ~ 55793222 (-)
G625812 NA non-coding upstream 152166 55802038 ~ 55802343 (-)
G625832 NA non-coding upstream 176189 55826061 ~ 55826268 (-)
G625862 NA non-coding upstream 219066 55868938 ~ 55869191 (-)
G625865 NA non-coding upstream 220885 55870757 ~ 55872516 (-)
G625472 LOC106582968 other downstream 472783 55164492 ~ 55188756 (-)
G625426 NA other downstream 569587 55072479 ~ 55075396 (-)
G622985 NA other downstream 2322152 53305536 ~ 53322831 (-)
G619733 NA other downstream 4686443 50956271 ~ 50958540 (-)
G627254 NA other upstream 1041451 56691323 ~ 56696091 (-)
G627314 NA other upstream 1184713 56834350 ~ 56835092 (-)
G627323 NA other upstream 1197090 56846962 ~ 56852301 (-)
vamp3 vamp3 other upstream 1203695 56853567 ~ 56869607 (-)
LOC110528040 NA other upstream 1402319 57052191 ~ 57059527 (-)

Expression


Co-expression Network