Gene
RNA
| Item | Value |
|---|---|
| gene id | foxp4 |
| gene name | LOC106583051 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 56107667 ~ 56295859 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| forkhead box protein P4-like |
| id | description |
|---|---|
| K09409 | FOXP2_4; forkhead box protein P2/4 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036983565.1 | False | 8955 | mRNA | 0.45 | 18 | 56107667 | 56295859 |
| XM_036983567.1 | False | 8696 | mRNA | 0.45 | 17 | 56133956 | 56295859 |
| XM_036983568.1 | False | 8601 | mRNA | 0.45 | 16 | 56133958 | 56295859 |
| XM_036983561.1 | False | 8815 | mRNA | 0.45 | 18 | 56133960 | 56295859 |
| XM_036983563.1 | False | 8801 | mRNA | 0.45 | 18 | 56133962 | 56295859 |
| XM_036983562.1 | False | 8799 | mRNA | 0.45 | 18 | 56133964 | 56295859 |
| XM_036983564.1 | False | 8785 | mRNA | 0.45 | 18 | 56133966 | 56295859 |
| XM_036983566.1 | True | 8599 | mRNA | 0.45 | 18 | 56180065 | 56295859 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110528971 | LOC106583048 | coding | upstream | 309383 | 55792291 ~ 55798284 (+) |
| LOC110528024 | LOC106583050 | coding | upstream | 392954 | 55711635 ~ 55714713 (+) |
| LOC110528022 | LOC106583050 | coding | upstream | 599501 | 55505406 ~ 55508166 (+) |
| LOC110528970 | LOC106582957 | coding | upstream | 691588 | 55333097 ~ 55416079 (+) |
| LOC110528019 | LOC106582960 | coding | upstream | 791764 | 55313448 ~ 55315903 (+) |
| mdfi | LOC106583052 | coding | downstream | 79340 | 56375199 ~ 56376062 (+) |
| ppfia4 | LOC106583137 | coding | downstream | 310033 | 56605892 ~ 56716813 (+) |
| LOC110528029 | mdm4 | coding | downstream | 454945 | 56750804 ~ 56766586 (+) |
| LOC110528032 | LOC106583134 | coding | downstream | 521422 | 56817281 ~ 56842143 (+) |
| LOC110528976 | LOC106583066 | coding | downstream | 552647 | 56848506 ~ 56849449 (+) |
| G625968 | NA | non-coding | upstream | 96626 | 56008179 ~ 56011041 (+) |
| G625964 | NA | non-coding | upstream | 103524 | 56002666 ~ 56004143 (+) |
| G625960 | NA | non-coding | upstream | 112480 | 55992773 ~ 55995187 (+) |
| G625886 | NA | non-coding | upstream | 214066 | 55893270 ~ 55893601 (+) |
| G625885 | NA | non-coding | upstream | 214516 | 55892929 ~ 55893151 (+) |
| G626300 | NA | non-coding | downstream | 13878 | 56309737 ~ 56309999 (+) |
| G626310 | NA | non-coding | downstream | 27881 | 56323740 ~ 56323941 (+) |
| G626323 | NA | non-coding | downstream | 46322 | 56342181 ~ 56369509 (+) |
| G626400 | NA | non-coding | downstream | 129875 | 56425734 ~ 56425974 (+) |
| G626468 | NA | non-coding | downstream | 229523 | 56525382 ~ 56525723 (+) |
| G626004 | NA | other | upstream | 28738 | 56071054 ~ 56078929 (+) |
| G625222 | NA | other | upstream | 634824 | 55472468 ~ 55472843 (+) |
| G625038 | NA | other | upstream | 893756 | 55211705 ~ 55213911 (+) |
| LOC110527126 | LOC106582962 | other | upstream | 899404 | 55207615 ~ 55208708 (+) |
| G626417 | NA | other | downstream | 186535 | 56482394 ~ 56485304 (+) |
| snrpe | ruxe | other | downstream | 1023843 | 57319669 ~ 57323047 (+) |
| G627035 | NA | other | downstream | 1247023 | 57542882 ~ 57596051 (+) |
| LOC110528055 | LOC106583107 | other | downstream | 1622175 | 57917801 ~ 58055214 (+) |
| LOC110528980 | LOC106583093 | other | downstream | 2207691 | 58502198 ~ 58589001 (+) |
