LOC118965357


Basic Information

Item Value
gene id LOC118965357
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 58075751 ~ 58098540 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC118965357
ATGCCCATGCCCATGCCCATGCCCATACCCATACCCATCACCATCCCCATGCCTATCCCCATCACTATCCCCATGCCCATCACCATCCCCATCACCATCCCCATGCCTATCCCAATCACCATGCCCATCCCCACCACCATGCCCATCACCATGCCCATCCCCATCACCATGCCCATCCCCATGCCcatccccattcccatccccatCACCATGCCCATCACCATTCCCATGCCCAACCTCATCACCATGCCCATATCCATCACCAAGCCTATCCCCATCCCCATCACCAtgcccatcaccatcaccatgcCTATCCCCATCCCCACCACCATGCCCATCCCCATACCCATCACCATCCCCATACCCATCACCATCCCCATGCCTATCCCCATCACTATCCCCATGCCCATCACCATGCCCATGCCCAGGCCCATCACCATCCCCATGCCCATCACCATCCCCATGCCTATCCCCATCACTATCCCCAtgcccatcaccatcaccatccccaCACCATGCCCATCACCATCCCCATGCCCATCACCATCCCCATGCCTATCCCCATCACTATCCCCAtgcccatcaccatcaccatccccaCACCATGCCCATACCATCACCATCCCAAATCACCATCCCCATGCCCATCACCATCCCCATGCCTATCCCCATCACTATCCCCATGCTGatcaccatccccatccccatgccTATCCCCATCACCATGCCCATCCCCACCACCATGCCCATCACCATGCCCATCACCATGCCCATCACCatgcccatccccatccccatccccatgccCAACCTCATCACCATGCCCATATCCATCACCAAGCCTATCCCCATCCCCATCACCAtgcccatcaccatcaccatgcCTATCCCCATCCCCACCACCATGCCCATCCCCATGCCCATCACCATCCCCATACTCATCACCATCCCCATGCCTATCCCCATCACTATCCCCATGCCCATCACCATGCCCATGCCCATGCCCATGCCCAGGCCCATCTCCATCCCCATGCCCATCACCATCCTCATGCCTATCCCCATCACAATCCCCAtgcccatcaccatcaccatccccaCACCCAtgcccatcaccatcaccatccccaTGCCCATGCCCatgcccatccccatccccatcaccATCCCCATGCCCATCACCATCCCCATGCCTATCCCCATCACTATCCCCATGCCCAttaccatccccatccccatgccTATCCCCATCACCATGCCCATCCCCACCACCATGCCCATCACCATGCCCATCCTCATCACCATGCCcatccccattcccatccccatCACCATGCCCATCACCatgcccatccccatccccatccccatgccCAACCTCATCACCATGCCCATATCCATCACCAAGCCTATCCCCATCCCCATCACCAtgcccatcaccatcaccatgcCTATCCCCATCCCCACCACCATTGCGTGTGAGAGAGTTTGACAGAAGGCCCTGTGGCATGCTGCCCCAAGGCTCTGACCTGATCAAAGCACAGTCTGTCAGTCTGCAgAACGCTGGAGAGCGTCCCCAGTCCAgtgcctccagcgacgatccacagtccagagcctccagctaCGATCTGCAGTCCAGAGTCTTCAGcgggggttcccagtccagagcctccggcgacgatctgCAGTCCGGAGCATCCAGCGGGGGTTCCCAGTtcagagcctccggcgatgatccatggtccggttcctccggcaacAATTCACGGTCCGGAGTCTCCAGCAaagatccacggtccggttccacagAAGCGCAGGAATCAGCGTAG

Function

NR:

description
PREDICTED: arabinogalactan protein 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC118965357 True 1826 mRNA 0.59 4 58075751 58098540

Neighbor

gene id symbol gene type direction distance location
LOC110528055 LOC106583107 coding upstream 20537 57917801 ~ 58055214 (+)
cdk18 LOC106583111 coding upstream 372820 57652040 ~ 57702931 (+)
LOC118965384 NA coding upstream 461117 57612793 ~ 57614634 (+)
si:ch211-112f3.4 LOC106583119 coding upstream 614049 57455837 ~ 57461702 (+)
LOC100135783 LOC100135783 coding upstream 670498 57336598 ~ 57405253 (+)
LOC110528059 LOC106583104 coding downstream 97185 58195725 ~ 58200256 (+)
LOC110528060 LOC106583103 coding downstream 108404 58206944 ~ 58233454 (+)
LOC110528978 atad3 coding downstream 156087 58254627 ~ 58265496 (+)
LOC110527127 NA coding downstream 190885 58289425 ~ 58291045 (+)
LOC110528068 LOC106595335 coding downstream 308245 58406785 ~ 58411255 (+)
G628104 NA non-coding upstream 51849 58023594 ~ 58023902 (+)
G628102 NA non-coding upstream 54672 58020828 ~ 58021079 (+)
G628101 NA non-coding upstream 56107 58019442 ~ 58019644 (+)
G628095 NA non-coding upstream 67775 58000110 ~ 58007976 (+)
G628156 NA non-coding downstream 8090 58106630 ~ 58106869 (+)
G628161 NA non-coding downstream 14251 58112791 ~ 58113016 (+)
G628162 NA non-coding downstream 18499 58117039 ~ 58117983 (+)
G628183 NA non-coding downstream 50454 58148994 ~ 58149369 (+)
G628185 NA non-coding downstream 52796 58151336 ~ 58151563 (+)
G627035 NA other upstream 479700 57542882 ~ 57596051 (+)
snrpe ruxe other upstream 752730 57319669 ~ 57323047 (+)
G626417 NA other upstream 1590447 56482394 ~ 56485304 (+)
G626004 NA other upstream 1996822 56071054 ~ 56078929 (+)
LOC110528980 LOC106583093 other downstream 405010 58502198 ~ 58589001 (+)
G628468 LOC106583084 other downstream 609755 58708295 ~ 58713584 (+)
LOC110528095 LOC106565671 other downstream 919805 58969726 ~ 59022859 (+)
LOC110528099 LOC106583069 other downstream 970130 59068637 ~ 59084729 (+)
G629678 NA other downstream 1585791 59684331 ~ 59684763 (+)

Expression


Co-expression Network