Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110528982 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 58665542 ~ 58668251 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| mediator of RNA polymerase II transcription subunit 20 |
| id | name | namespace |
|---|---|---|
| GO:0006351 | transcription, DNA-templated | biological_process |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| LOC110528982 | True | 692 | mRNA | 0.50 | 4 | 58665542 | 58668251 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| nuak2 | LOC106583089 | coding | upstream | 9964 | 58640045 ~ 58655578 (+) |
| LOC110528980 | LOC106583093 | coding | upstream | 76541 | 58502198 ~ 58589001 (+) |
| LOC110528073 | LOC106583096 | coding | upstream | 165327 | 58470112 ~ 58500215 (+) |
| LOC110528068 | LOC106595335 | coding | upstream | 254287 | 58406785 ~ 58411255 (+) |
| LOC110527127 | NA | coding | upstream | 374497 | 58289425 ~ 58291045 (+) |
| LOC110528081 | LOC106583088 | coding | downstream | 2812 | 58671063 ~ 58677554 (+) |
| LOC110528084 | LOC106583083 | coding | downstream | 59882 | 58728133 ~ 58737629 (+) |
| LOC110528086 | LOC106583082 | coding | downstream | 69608 | 58737859 ~ 58800122 (+) |
| LOC110528087 | LOC106583081 | coding | downstream | 136509 | 58804760 ~ 58816086 (+) |
| LOC110528088 | LOC106583080 | coding | downstream | 156803 | 58825054 ~ 58834303 (+) |
| G628458 | NA | non-coding | upstream | 42207 | 58622608 ~ 58623335 (+) |
| G628457 | NA | non-coding | upstream | 45316 | 58619967 ~ 58620226 (+) |
| G628451 | NA | non-coding | upstream | 55174 | 58610111 ~ 58610368 (+) |
| G628371 | NA | non-coding | upstream | 75195 | 58590098 ~ 58590347 (+) |
| G628432 | NA | non-coding | upstream | 98464 | 58566575 ~ 58567078 (+) |
| G628476 | NA | non-coding | downstream | 44646 | 58712897 ~ 58718648 (+) |
| G628478 | NA | non-coding | downstream | 175029 | 58843280 ~ 58852652 (+) |
| G628566 | NA | non-coding | downstream | 222877 | 58891128 ~ 58894932 (+) |
| G628572 | NA | non-coding | downstream | 238176 | 58906427 ~ 58906692 (+) |
| LOC110528092 | LOC106583074 | non-coding | downstream | 250908 | 58915182 ~ 58920830 (+) |
| LOC110528055 | LOC106583107 | other | upstream | 673670 | 57917801 ~ 58055214 (+) |
| G627035 | NA | other | upstream | 1069491 | 57542882 ~ 57596051 (+) |
| snrpe | ruxe | other | upstream | 1342521 | 57319669 ~ 57323047 (+) |
| G626417 | NA | other | upstream | 2180238 | 56482394 ~ 56485304 (+) |
| G628468 | LOC106583084 | other | downstream | 40044 | 58708295 ~ 58713584 (+) |
| LOC110528095 | LOC106565671 | other | downstream | 350094 | 58969726 ~ 59022859 (+) |
| LOC110528099 | LOC106583069 | other | downstream | 400419 | 59068637 ~ 59084729 (+) |
| G629678 | NA | other | downstream | 1016080 | 59684331 ~ 59684763 (+) |
| G629679 | NA | other | downstream | 1016621 | 59684872 ~ 59685187 (+) |
