LOC110528086 (LOC106583082)


Basic Information

Item Value
gene id LOC110528086
gene name LOC106583082
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 58737859 ~ 58800122 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036983638.1
GATGCTTGAGCAAACGAAGGCAGAGGAGGCTCGCATCCCCCGCCCACAATTTCAGGTGACAGCTAGGCAAAACAGGCCGTTCACAACTTGCTGCACGCCAAGGAACTGCGCAGGCAACGAACCGTTTTATGACAGCAATTACTACACTGTAGTTTGTAAATATAGAATTACCAACTGATACACCAAACGGCTGTTAATTAATTGTTTCTAAATCGTGTGAATTGCAGTCCAGCTGCACAAAAAAATCCCTCTTCCGCAATATACCGAACAGTGGGGAGAAACTCGAATCCTGTAGCTAacttaactaacgttagctatacCACGGGCTAACTAATTTGTTGTACGTTTTAATTATTTATCGAAATGTCAGACACTCCGGGGGACGGAAAGTTGGAGCTGAAACAAGCCAGCAAAGAAGTAAAGGAGAGCGAGAATGTGGCTGAAAAATACTCAGCCATGACCGTGAGCAAGAACAGCGAAATTACCATGGGTGAACTGTCAGTGTCGTCTGCTGCGTTCAGTGCGGTCCCTATTCACAAACCCGTTAAAAAGCAAATCCAGTTTGTGGAAGACAAGCAGGAGTTCAGCAGGTTCCCTACCAAGGCTGGCCGACGCTCGCTGTCTCGATCCATCTCTCAGTCATCCACGGACAGCTACAGCTCCGCTGCGTCCTACACAGACAGCTCTGACGATGAGACTTCACCACGGGACAAAACACAGCTCAACTCCAAGGGCACCAGTGACTTCTGTGTGAAGAACATCAAACAGGCCGAATTTGGTCGTCGTGAGATTGAGATTGCAGAACAAGaTATGTCAGCATTAATCTCCCTCAGGAAGAGAGCCCAGGGAGAGAAGCCACTTGCTGGGGCAAAAATTGTTGGCTGCACTCACATCACTGCCCAGACTGCAGTGTTGATTGAGACTCTGGTGGCCCTGGGGGCCCAGTGTCGCTGGACAGCCTGTAACATCTACTCAACACAGAACGAGGTGGCAGCTGCCCTCTCAGAGATCGGTGTGGCGGTTTTTGCCTGGAAGGGGGAATCGGAGGATGACTTCTGGTGGTGTATCGACAAGTGCGTCAACATGGAGGGCTGGCAGCCTAACATGATCCTTGATGATGGAGGGGACTTGACCCACTGGGTGTATAAGAAATACCCCAACGTCTTCAAGAAGATCAGGGGCATTGTGGAGGAGAGTGTGACTGGGGTCCACAGGTTGTACCAGTTGTCCAAAGCAGGCAAACTATGTGTGCCAGCCATGAACGTGAATGACTCTGTGACAAAGCAGAAGTTTGACAACCTCTACTGCTGCAGAGAGTCTATCCTGGATGGCCTGAAGAGGACCACAGATGTGATGTTTGGTGGAAAGCAGGTTGTTGTATGTGGTTATGGAGAGGTTGGGAAAGGTTGCACTGCCGCATTGAAAGCCATGGGATCCATTGTCTACGTCACAGAGATTGATCCCATCTGCGCCCTGCAGGCCTGCATGGACGGCTTCAGGGTGGTCAAGCTGAATGAGGTCATCCGCCAGGTGGACGTCATCATCACATGCACGGGGAATAAGAACGTGGTGACCAGGGACCAGCTGGACCGCATGAAGAATGGCTCCATCGTGTGCAACATgggacactccaacactgagaTTGACGTGGCAAGCCTGCGGACCCCAGAACTGACCTGGGAGAGAGTGCGCTCTCAGGTGGACCACGTCATCTGGCCTGACGGCAAGAGGGTCATCCTGCTGGCCGAGGGTCGTCTTCTGAACCTCAGCTGCTCCACAGTTCCCACCTTCGTCCTGTCAATCACAGCCACGACCCAGGCTCTGGCCCTTATTGAGCTGTACAATGCTCCAGAGGGCCGCTACAAACAGGATGTCTACTTGCTGCCCAAGAAGATGGATGAGTATGTTGCCAGCCTTCACCTGCCCACCTTTGATGCCCACCTGACTGAGCTTTCAGATGAGCAGGCCAAGTACCTGGGTCTCAACAAGAATGGCCCATTCAAACCCAACTACTACAGGTATTAGCTTGCATGACTGGACCACAACTCTGCACTCCTTGACTTGGACAAGGCCTGGATGACCAGAAGATAATGAaatctatattttattttttaaagacagTTTTTGTTTTCAAATCAAGCTCTATCCCGTCATCATCTTCAGTAAATGTTACCCTGTTTCACTTGCTGTTTTGTGTGTTTAGTTTCACCATCAGTTCTGTAAATACACACCTCCTCTAAGAAACCAGCACGCAGGATCCCACTGGCCATGAATGACTAATTAATTGAAAGCACTTAAACTCTGCTCTCTGCTAGAGATGTATTTTTTTCTACAGAAGTCTGATTTCATACCCACAATCCACTAGAATAGACACTTTTTTTGATGGATAATCAGTAGTTTGTTTTATGTTTATATTATTGTGCCAAATGATTGTGTAGGGAAGGGGATCGTTGTGATTGAGATTTTATTTGTTTTCTGCATTGACGTCGCTACACGCTTCTCAAATCATTACATTCCAGCCAGGGGAACAGGGAGAAATGGCCTCTACACTAGAAAGTCCCAATTgcatttaaaggtccaatgcagctgtttgtATCTTAATATCTAATCATTTCTGGGtcacaattaagtaccttactgcgattgtttcttttttttttttactattttaattgaaaacaaacagcttcttagcaaagagcaatttctcaagcaagaattttgctaggactgtcagggagtggtctgagtgggttGGGGAAAACccgaaaactagctgttattgtcagaaaggtttggaactctcttattggtctattgaCTAATTTACCGTCTGGTGATGTCATCAGGCAGGCCAAACTCCATCCCAACAAAACAGGCTGAAacttcaggcagtcttttcaaacagcgcTTACTCTAAAAGGGCATTATTGTAATTTTAACAAttccacagccttattctagaaatatatataaaacaaaggaaatgaagtgtttgactgcactgggccttaaaCACATTGTCACATTTCCTACTGGAAACATGATACCCACATAGATGTTTATTACCAGCTGTTAATTttactgctctatcctctctccctttgGAACAGAGCTGAAATGTGATTGAATTGAAAAGATGATTACTTTTACTGACTGAACCTCCTAAGCCGtacatgtatgcatgcatgtacagTACAGAAATGTAGTTATCTTCACCAACGTGTAGATACAGGAAGGTATGTGTAACCAGAAGAGCGATTATCCAATGTGGCACTGGTTTTGATTGAGTCTCACATGGTTATAGGGTAATAACACTGAAATGTTTTGCATTAGAGGAGTCTTATCAGACTCAAATGACAATAGTGGAGTTGACATTTCTCCATCTCTGGTCCTAATTATGTGGAAATTTGTTTATTGAAATTATTTTTGAAATATTGTAGTTGGCTGATAGTTTATTGTTACTGGTATCATTTTTTTGTGTCGTGAATCCTGTTTTCTCTTAATGTTCCTAATCACCAtgttgttcttctctgttctctacATCCATACCTGCGTGTTTTCATGTCACCATCACATGGTCACTATTGTCAGTTTTTAGCAGAAAGAATAACCTTACACAGTCAACCAACTCTCCATAAGGGAGAGTTGTTTTTCAGTGGAGTAATGATCATCATCAGACTGCAAACTGCATGTTTtatggtgtttttttttatttcacccgCCGATAATATTACAGAGGGTAAATAATATGTATGTATTACCTGTGCATTTAACAGACCACTGTCACCCTGGTCTGTTAACATGGGACACTGAGTCCATTGAATACAGACCACATCTGTGCATACAATTTTAGTTTTTGCTGAGGTTTTCAGGCTTTTCTGTCCTTCCATTTTAGCTGTGTGAAACAGATACTGTTTAATTTGTGTATATGTTCGCTGATGCAACTGTGAGATAAAGCACTTTCATCTTTGCACTACTTAAAGCTGTTGGGCATTACAAGCAAGGACTTATGCGTGAGAAGAACATTGTTGGCGGGACATTGGCGTCGTAACGTTGGTTACTGGTCAAGTGACAGTGCCTTGTGACTCATCTGCTACTGTACATATTCATCACTTGTAGGATTATGTCCGTCTGCTCTCTTCCTCTTTGGAAGCTGTCCAACAGTGTTCTGATTCTGCAATATAATCGCTGTGCACAAATCTAGTGGTCTCTTATAAAGATTTGTACTTATTGGGGGGGTACCAAAACTGCTTGAAGTGTCAATATTTTAAAGTTACTTCCAGTGTGAGTTAACAAAGTAGTTTGAATTCACTTGTTTTGTAGATACCATTGTTTTTGAAAGTACAGTACATTTTGGGTATGGTCTGTATAGCACTACCAAAAGCATGCCATAAAGTAAAAATGACTCGATCGCCCAGAATTCCTTTACATGCACTGCATTGATTACAATGCTTCTATCAAGTTCCGTTTTAGTTAAATGAATCTTCCATATTTTTTATTCATTCATACTGTCATAACGATAAGGACTAGCCGGATGTCCTAATAACTGACAAATATAGTCAGTTTATGAAACATTGTCTAACAGGAGAGAGTTCTTATCTCACCAGCTTTCAAGTCCAGGGTCATTTGGCTGTTGTATGCAAcagtgctctgcaatttcacttcAACCGACGTAAATAGTGAAGAACTCTAGTGACATAATTATTATGCTTATGTGATTGATTTGTAACCATTTTTAATAATTTAATCTCGAAAATACCATATACCAAGTGACAAGTTTCACTTGTTGACAACAGTATTCAAAACCAAGTGATGTGTGAGGAGCTGAAATGTTGACCCTTTTATTATTTGAAGCAAGGATCACTGAGACGTACATGATGCGAGAATTGCTTATGTATCTCTGGTTTCGACAAAACAAACTTTTTAGCTGATTATTTGAGCTTTGCAAATGAAATCATAATGTTAGATTTATACAGTACTATGTATTATTTGTCTGTGTATTATTTGGTGAAGTCTGGCTGAGTCTCAATTCAAATTGATTTACTTGAATGCTCTCCGATGCTGTTATTTCTGTTTCTGCTTTCTGTTGGTTGATGTATACCTATCCCTTTAATAAACTTTTCTGTGTTTGAATTAAACTGCTCGTG
>XM_036983639.1
CGATACTGCAAACAGCAGAAAACAACTCAAGTAAAGCACAGAAAAAAAGAGGGAAGATAATTTGTCAGGTGGCTGCTGGTGGGGGCTATGGCACGGCCCTCTTTTGCCCTCCTGGTGTGGAGATTTCCATGATAACAGGCACTGTACGTAACAACCAGGAGAAGAGCTTGAGCACTGGTAAGGGATGAACATGGAACCTGTACGGCAAGTGGGAGGCATGGAGCTGCAAGCGGGAGCCATGgcacaggcacacaaacacagGCAAATCCAGTTTGTGGAAGACAAGCAGGAGTTCAGCAGGTTCCCTACCAAGGCTGGCCGACGCTCGCTGTCTCGATCCATCTCTCAGTCATCCACGGACAGCTACAGCTCCGCTGCGTCCTACACAGACAGCTCTGACGATGAGACTTCACCACGGGACAAAACACAGCTCAACTCCAAGGGCACCAGTGACTTCTGTGTGAAGAACATCAAACAGGCCGAATTTGGTCGTCGTGAGATTGAGATTGCAGAACAAGaTATGTCAGCATTAATCTCCCTCAGGAAGAGAGCCCAGGGAGAGAAGCCACTTGCTGGGGCAAAAATTGTTGGCTGCACTCACATCACTGCCCAGACTGCAGTGTTGATTGAGACTCTGGTGGCCCTGGGGGCCCAGTGTCGCTGGACAGCCTGTAACATCTACTCAACACAGAACGAGGTGGCAGCTGCCCTCTCAGAGATCGGTGTGGCGGTTTTTGCCTGGAAGGGGGAATCGGAGGATGACTTCTGGTGGTGTATCGACAAGTGCGTCAACATGGAGGGCTGGCAGCCTAACATGATCCTTGATGATGGAGGGGACTTGACCCACTGGGTGTATAAGAAATACCCCAACGTCTTCAAGAAGATCAGGGGCATTGTGGAGGAGAGTGTGACTGGGGTCCACAGGTTGTACCAGTTGTCCAAAGCAGGCAAACTATGTGTGCCAGCCATGAACGTGAATGACTCTGTGACAAAGCAGAAGTTTGACAACCTCTACTGCTGCAGAGAGTCTATCCTGGATGGCCTGAAGAGGACCACAGATGTGATGTTTGGTGGAAAGCAGGTTGTTGTATGTGGTTATGGAGAGGTTGGGAAAGGTTGCACTGCCGCATTGAAAGCCATGGGATCCATTGTCTACGTCACAGAGATTGATCCCATCTGCGCCCTGCAGGCCTGCATGGACGGCTTCAGGGTGGTCAAGCTGAATGAGGTCATCCGCCAGGTGGACGTCATCATCACATGCACGGGGAATAAGAACGTGGTGACCAGGGACCAGCTGGACCGCATGAAGAATGGCTCCATCGTGTGCAACATgggacactccaacactgagaTTGACGTGGCAAGCCTGCGGACCCCAGAACTGACCTGGGAGAGAGTGCGCTCTCAGGTGGACCACGTCATCTGGCCTGACGGCAAGAGGGTCATCCTGCTGGCCGAGGGTCGTCTTCTGAACCTCAGCTGCTCCACAGTTCCCACCTTCGTCCTGTCAATCACAGCCACGACCCAGGCTCTGGCCCTTATTGAGCTGTACAATGCTCCAGAGGGCCGCTACAAACAGGATGTCTACTTGCTGCCCAAGAAGATGGATGAGTATGTTGCCAGCCTTCACCTGCCCACCTTTGATGCCCACCTGACTGAGCTTTCAGATGAGCAGGCCAAGTACCTGGGTCTCAACAAGAATGGCCCATTCAAACCCAACTACTACAGGTATTAGCTTGCATGACTGGACCACAACTCTGCACTCCTTGACTTGGACAAGGCCTGGATGACCAGAAGATAATGAaatctatattttattttttaaagacagTTTTTGTTTTCAAATCAAGCTCTATCCCGTCATCATCTTCAGTAAATGTTACCCTGTTTCACTTGCTGTTTTGTGTGTTTAGTTTCACCATCAGTTCTGTAAATACACACCTCCTCTAAGAAACCAGCACGCAGGATCCCACTGGCCATGAATGACTAATTAATTGAAAGCACTTAAACTCTGCTCTCTGCTAGAGATGTATTTTTTTCTACAGAAGTCTGATTTCATACCCACAATCCACTAGAATAGACACTTTTTTTGATGGATAATCAGTAGTTTGTTTTATGTTTATATTATTGTGCCAAATGATTGTGTAGGGAAGGGGATCGTTGTGATTGAGATTTTATTTGTTTTCTGCATTGACGTCGCTACACGCTTCTCAAATCATTACATTCCAGCCAGGGGAACAGGGAGAAATGGCCTCTACACTAGAAAGTCCCAATTgcatttaaaggtccaatgcagctgtttgtATCTTAATATCTAATCATTTCTGGGtcacaattaagtaccttactgcgattgtttcttttttttttttactattttaattgaaaacaaacagcttcttagcaaagagcaatttctcaagcaagaattttgctaggactgtcagggagtggtctgagtgggttGGGGAAAACccgaaaactagctgttattgtcagaaaggtttggaactctcttattggtctattgaCTAATTTACCGTCTGGTGATGTCATCAGGCAGGCCAAACTCCATCCCAACAAAACAGGCTGAAacttcaggcagtcttttcaaacagcgcTTACTCTAAAAGGGCATTATTGTAATTTTAACAAttccacagccttattctagaaatatatataaaacaaaggaaatgaagtgtttgactgcactgggccttaaaCACATTGTCACATTTCCTACTGGAAACATGATACCCACATAGATGTTTATTACCAGCTGTTAATTttactgctctatcctctctccctttgGAACAGAGCTGAAATGTGATTGAATTGAAAAGATGATTACTTTTACTGACTGAACCTCCTAAGCCGtacatgtatgcatgcatgtacagTACAGAAATGTAGTTATCTTCACCAACGTGTAGATACAGGAAGGTATGTGTAACCAGAAGAGCGATTATCCAATGTGGCACTGGTTTTGATTGAGTCTCACATGGTTATAGGGTAATAACACTGAAATGTTTTGCATTAGAGGAGTCTTATCAGACTCAAATGACAATAGTGGAGTTGACATTTCTCCATCTCTGGTCCTAATTATGTGGAAATTTGTTTATTGAAATTATTTTTGAAATATTGTAGTTGGCTGATAGTTTATTGTTACTGGTATCATTTTTTTGTGTCGTGAATCCTGTTTTCTCTTAATGTTCCTAATCACCAtgttgttcttctctgttctctacATCCATACCTGCGTGTTTTCATGTCACCATCACATGGTCACTATTGTCAGTTTTTAGCAGAAAGAATAACCTTACACAGTCAACCAACTCTCCATAAGGGAGAGTTGTTTTTCAGTGGAGTAATGATCATCATCAGACTGCAAACTGCATGTTTtatggtgtttttttttatttcacccgCCGATAATATTACAGAGGGTAAATAATATGTATGTATTACCTGTGCATTTAACAGACCACTGTCACCCTGGTCTGTTAACATGGGACACTGAGTCCATTGAATACAGACCACATCTGTGCATACAATTTTAGTTTTTGCTGAGGTTTTCAGGCTTTTCTGTCCTTCCATTTTAGCTGTGTGAAACAGATACTGTTTAATTTGTGTATATGTTCGCTGATGCAACTGTGAGATAAAGCACTTTCATCTTTGCACTACTTAAAGCTGTTGGGCATTACAAGCAAGGACTTATGCGTGAGAAGAACATTGTTGGCGGGACATTGGCGTCGTAACGTTGGTTACTGGTCAAGTGACAGTGCCTTGTGACTCATCTGCTACTGTACATATTCATCACTTGTAGGATTATGTCCGTCTGCTCTCTTCCTCTTTGGAAGCTGTCCAACAGTGTTCTGATTCTGCAATATAATCGCTGTGCACAAATCTAGTGGTCTCTTATAAAGATTTGTACTTATTGGGGGGGTACCAAAACTGCTTGAAGTGTCAATATTTTAAAGTTACTTCCAGTGTGAGTTAACAAAGTAGTTTGAATTCACTTGTTTTGTAGATACCATTGTTTTTGAAAGTACAGTACATTTTGGGTATGGTCTGTATAGCACTACCAAAAGCATGCCATAAAGTAAAAATGACTCGATCGCCCAGAATTCCTTTACATGCACTGCATTGATTACAATGCTTCTATCAAGTTCCGTTTTAGTTAAATGAATCTTCCATATTTTTTATTCATTCATACTGTCATAACGATAAGGACTAGCCGGATGTCCTAATAACTGACAAATATAGTCAGTTTATGAAACATTGTCTAACAGGAGAGAGTTCTTATCTCACCAGCTTTCAAGTCCAGGGTCATTTGGCTGTTGTATGCAAcagtgctctgcaatttcacttcAACCGACGTAAATAGTGAAGAACTCTAGTGACATAATTATTATGCTTATGTGATTGATTTGTAACCATTTTTAATAATTTAATCTCGAAAATACCATATACCAAGTGACAAGTTTCACTTGTTGACAACAGTATTCAAAACCAAGTGATGTGTGAGGAGCTGAAATGTTGACCCTTTTATTATTTGAAGCAAGGATCACTGAGACGTACATGATGCGAGAATTGCTTATGTATCTCTGGTTTCGACAAAACAAACTTTTTAGCTGATTATTTGAGCTTTGCAAATGAAATCATAATGTTAGATTTATACAGTACTATGTATTATTTGTCTGTGTATTATTTGGTGAAGTCTGGCTGAGTCTCAATTCAAATTGATTTACTTGAATGCTCTCCGATGCTGTTATTTCTGTTTCTGCTTTCTGTTGGTTGATGTATACCTATCCCTTTAATAAACTTTTCTGTGTTTGAATTAAACTGCTCGTG

Function

NR:

description
PREDICTED: adenosylhomocysteinase 2 isoform X2

GO:

id name namespace
GO:0006730 one-carbon metabolic process biological_process
GO:0009953 dorsal/ventral pattern formation biological_process
GO:0004013 adenosylhomocysteinase activity molecular_function

KEGG:

id description
K01251 E3.3.1.1, ahcY; adenosylhomocysteinase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036983638.1 False 5150 mRNA 0.43 17 58737859 58800122
XM_036983639.1 True 4860 mRNA 0.43 17 58754373 58800122

Neighbor

gene id symbol gene type direction distance location
LOC110528084 LOC106583083 coding upstream 230 58728133 ~ 58737629 (+)
LOC110528081 LOC106583088 coding upstream 60305 58671063 ~ 58677554 (+)
LOC110528982 NA coding upstream 69608 58665542 ~ 58668251 (+)
nuak2 LOC106583089 coding upstream 82281 58640045 ~ 58655578 (+)
LOC110528980 LOC106583093 coding upstream 148858 58502198 ~ 58589001 (+)
LOC110528087 LOC106583081 coding downstream 4638 58804760 ~ 58816086 (+)
LOC110528088 LOC106583080 coding downstream 24932 58825054 ~ 58834303 (+)
LOC110528089 LOC106583079 coding downstream 35158 58835280 ~ 58841319 (+)
LOC110528091 LOC106583076 coding downstream 78811 58878933 ~ 58889711 (+)
LOC110528092 LOC106583074 coding downstream 115060 58915182 ~ 58920830 (+)
G628476 NA non-coding upstream 19211 58712897 ~ 58718648 (+)
G628458 NA non-coding upstream 114524 58622608 ~ 58623335 (+)
G628457 NA non-coding upstream 117633 58619967 ~ 58620226 (+)
G628451 NA non-coding upstream 127491 58610111 ~ 58610368 (+)
G628371 NA non-coding upstream 147512 58590098 ~ 58590347 (+)
G628478 NA non-coding downstream 43158 58843280 ~ 58852652 (+)
G628566 NA non-coding downstream 91006 58891128 ~ 58894932 (+)
G628572 NA non-coding downstream 106305 58906427 ~ 58906692 (+)
G629165 NA non-coding downstream 122114 58922236 ~ 58922541 (+)
G628468 LOC106583084 other upstream 24275 58708295 ~ 58713584 (+)
LOC110528055 LOC106583107 other upstream 745987 57917801 ~ 58055214 (+)
G627035 NA other upstream 1141808 57542882 ~ 57596051 (+)
snrpe ruxe other upstream 1414838 57319669 ~ 57323047 (+)
LOC110528095 LOC106565671 other downstream 218223 58969726 ~ 59022859 (+)
LOC110528099 LOC106583069 other downstream 268548 59068637 ~ 59084729 (+)
G629678 NA other downstream 884209 59684331 ~ 59684763 (+)
G629679 NA other downstream 884750 59684872 ~ 59685187 (+)
LOC110528122 LOC106583221 other downstream 905831 59705922 ~ 59712261 (+)

Expression


Co-expression Network