LOC110528093 (gnai3)


Basic Information

Item Value
gene id LOC110528093
gene name gnai3
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 58925940 ~ 58932441 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021609900.2
ACGATGAGAGTCAACGTTTGTTTGCTCATCTCATCTGCAAGCTTGCATAATTGTAGGGCCAGACAATTTAAATTGTTAACAAAAGAGCAGTGAACAGCCAGTAGTATTTAAACGTGTGTGAGTATTTTGAATCAGTTTAGGGTTTGAGATTTTTTTCGTGTGTAAACTTTTAACTCACGATATTCAgcaaaaaaaaacttttcaaGCCAACCCGGAAAGAACTTAAAGCTACTAACTTTGTTTAGCCAAACGGACAATTTCTAGCTACCTAACATTAAGTTAATTTGGTAACTACTACTTCATTTGTTTATTCGAATGAATGTTGAATTGTCATGCTCTTCTATTAAAACGTTAAGTATTCGTCTTCCTAGCAAGTTACATGACATATGCATAGTAAAAACTAACATGTACTAGCTAGCTTGCTGGCCAAcgccttttttttctcccttttttttctcccttttttgCCCCCATTATGCTCGTCGTCGCACAAATGTAGTTTGGAAACGTGTCGTAGTTAACATGGACCAGAATTCTGCGGCAAGCGTTTGACAGACACAACAGTACAACTTTGTAGTTAGAATTAGAATGTCATTCCGTCTTTTTTACTGAACTTTTTTTCCATTTGGATAACTTGTCAAACGCCAGGTAGCTTTCCAGCTTTACATTATCATAGTATTTAGGATTTACCTGCTGGGATCAAAATGGGTTGCACACTAAGTGCCGAAGATAAAGCTGCCATGGAGAGGAGTAAAATCATTGATCGGAATCTGAGAGAATCTGGCGAAAAGGCTTCAAGTGAAGTCAAATTGTTGCTTCTAGGTGCTGGGGAGTCTGGGAAGAGCACCGTTGTAAAGCAGATGAAAATCATCCATGAGGATGGCTACACACAGGAGGAGTGTAGCCAGTACAGGGTTGTGGTTTACAGCAACACCATCCAGTCCATCATTGCCATCATCAGAGCCATGGGCAGGCTCGCCATTGACTTTGGGGACACAGCAAGATCAGATGATGCCCGCCAGCTCTTTACCTTGGCCAGCTCAGCAGAGGAAGGGGTCATGACCCCTGAACTGGCTGGGGTCATCAAGAGGTTATGGCAGGATGGAGGGGTCCAGATCTGCTTTGGCAGGTCCAGAGAGTACCAGCTCAACGACTCAGCCTCATATTACCTGAATGATTTGGACAGGATATCCCAGCAGAACTATGTGCCCACGCAGCAGGATGTTTTGCGGACAAGAGTCAAGACCACCGGCATCGTGGAGACACACTTCACATTCAAGGACCTCTACTTCAAGATGTTTGATGtggggggtcagaggtcagagaggaagaagtggaTCCACTGCTTTGAGGGAGTCACAGCCATCATCTTCTGTGTGGCGCTGAGTGACTATGACCTGGTGCTGgctgaggatgaggagatgAACCGTATGCATGAGAGCATGAAGCTATTTGACTCCATCTGTAACAACAAGTGGTTCACGGGCACCTCAGTCATCCTCTTTCTCAACAAGAAGGATCTGTTTGAGGACAAGATCCAGAAGAGCCCGCTCACTATCTGCTACCCAGAGTACTCAGGTCCAAACACATACAAAGAGGCGTCAACCTACATTCAGTGTCAGTTTGAAGACTTGAACAAGCGGAAGGATACAAAGGAGATCTACACCCATTTCACTTGTGCTACTGACACTAAGAACGTGCAGTTTGTCTTTGACGCTGTCACTGATGTCATTATCAAAGCCAGCCTGAAGGAGGTTGGCTTGTACTGAGACTCCTGCAACATCTGCCTGTCATCATAGGGGCGGGAGTGTGTTGGAATCCTCTCGCGCATTTACAAGTGGGAATTGCTCATTGCCTTTGACAGTCCACATCTATGATTGGCTATTGGAAAGGTtcattgtttgaactgcagaagTAGGCTGCAGAGTACATGGGGGTTGTTAGACCATATACTGTTGCCATAATGTATGATGAATCCTTGGATATTTCAAGACAAGATTACATAGGCCACTTATGTGCTTTTGCTTTTCTATACTTTTGTTGTGGATTCATGGCTATGGACTTACTTTTTAAGTTGTGAGTGTTGGATTTCTCATTTTTGAATGTTATTGCCAAATTTCTGTCAAACCTTTCAAACATCTGCACTTAGGCTTTCAGCGTTCACTTTAAAGGGTTAAAAGGTATTAATTACGTTGTAAATGTTGAATAGGATATCAACTATTATGCATTTGCTGAGTTTTGATAACTCTCTATAACTGTCTTTATAACTAAGTCTTTCTTACAGTATAAATGGTCACGGCCTTGTCCACTAGTGTTAAGTATTTTTAATTATCTCTTGGTAATGTTAATATGCTGAATTCTTGTTTTAATTCATCACTATTCAGATCGTTACATAACACTTAATGTAGTTTACTGGCTGTAAACAAACTGTAAGAGATTAATTTTCAGATGATATCACTTGATGTTTTAAACCACTTTTAAAGAATAAGCTTTTGTAATGGTTGCCTTGACTTGGATTATGTTGCCTATTTTCTTTGGATTATCTTTGTATATAACTATTTGTATAAAGATTATGGCCTATTTGTATAAAGATTATGGCCTTTCACTTAGTGGCCTTATTAGAAACTAAGTATTTGCCATTGAAATGCTCCTTTTTATGTTAATCACATTGCCATTTGGACATTTAACATGAATGTTCCTTTGATTAAATTGAATGTGGGCCAAA

Function

symbol description
gnai3 Predicted to enable G protein-coupled receptor binding activity; G-protein beta/gamma-subunit complex binding activity; and GTPase activity. Predicted to be involved in adenylate cyclase-modulating G protein-coupled receptor signaling pathway. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be part of heterotrimeric G-protein complex. Is expressed in barbel; brain; gill; lip; and sensory system. Orthologous to human GNAI3 (G protein subunit alpha i3).

NR:

description
guanine nucleotide-binding protein G(k) subunit alpha-like

GO:

id name namespace
GO:0007188 adenylate cyclase-modulating G protein-coupled receptor signaling pathway biological_process
GO:0006184 obsolete GTP catabolic process biological_process
GO:0003924 GTPase activity molecular_function
GO:0005525 GTP binding molecular_function
GO:0004871 obsolete signal transducer activity molecular_function
GO:0031683 G-protein beta/gamma-subunit complex binding molecular_function

KEGG:

id description
K04630 GNAI; guanine nucleotide-binding protein G(i) subunit alpha

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021609900.2 True 2725 mRNA 0.41 8 58925940 58932441

Neighbor

gene id symbol gene type direction distance location
LOC110528092 LOC106583074 coding upstream 5110 58915182 ~ 58920830 (+)
LOC110528091 LOC106583076 coding upstream 36229 58878933 ~ 58889711 (+)
LOC110528089 LOC106583079 coding upstream 84621 58835280 ~ 58841319 (+)
LOC110528088 LOC106583080 coding upstream 91637 58825054 ~ 58834303 (+)
LOC110528087 LOC106583081 coding upstream 109854 58804760 ~ 58816086 (+)
LOC110528095 LOC106565671 coding downstream 37285 58969726 ~ 59022859 (+)
LOC110528097 LOC106583070 coding downstream 102632 59035073 ~ 59042858 (+)
LOC110528099 LOC106583069 coding downstream 136196 59068637 ~ 59084729 (+)
LOC110528104 LOC106565516 coding downstream 337221 59269662 ~ 59293823 (+)
LOC110528105 LOC106583239 coding downstream 366601 59299042 ~ 59317047 (+)
G629165 NA non-coding upstream 3399 58922236 ~ 58922541 (+)
G628572 NA non-coding upstream 19248 58906427 ~ 58906692 (+)
G628566 NA non-coding upstream 31008 58891128 ~ 58894932 (+)
G628478 NA non-coding upstream 73288 58843280 ~ 58852652 (+)
G629170 NA non-coding downstream 286 58932727 ~ 58933102 (+)
G629171 NA non-coding downstream 1503 58933944 ~ 58934154 (+)
G629174 NA non-coding downstream 5392 58937833 ~ 58938061 (+)
G629175 NA non-coding downstream 6022 58938463 ~ 58938711 (+)
G629178 NA non-coding downstream 10677 58943118 ~ 58943555 (+)
G628468 LOC106583084 other upstream 212356 58708295 ~ 58713584 (+)
LOC110528980 LOC106583093 other upstream 421863 58502198 ~ 58589001 (+)
LOC110528055 LOC106583107 other upstream 934068 57917801 ~ 58055214 (+)
G627035 NA other upstream 1329889 57542882 ~ 57596051 (+)
snrpe ruxe other upstream 1602919 57319669 ~ 57323047 (+)
G629678 NA other downstream 751890 59684331 ~ 59684763 (+)
G629679 NA other downstream 752431 59684872 ~ 59685187 (+)
LOC110528122 LOC106583221 other downstream 773512 59705922 ~ 59712261 (+)

Expression


Co-expression Network