LOC110528103 (LOC106583067)


Basic Information

Item Value
gene id LOC110528103
gene name LOC106583067
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 59132559 ~ 59157301 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021609920.2
CGTGCCTCAGATTCCTGTCaagcagaggggggggggttaaactGCGCCCCCCCTGTCCCATTCAGTCACTTTCCtagtcaggcaggcagagagagtgagaggagagaaagagGCAGATCCAGGACCATGGCACATCATGAAGCACCCCATAAAGACCCCAGAAAGATGGGCATCGGCCGCTCCATCGCCGTGCTGACCTCCGGAGGCGATGCCCAGGGTATGAATGCTGCTGTGAGGGCCACAGTCAGAATGGGCATCTACACTGGGGCCAAGGTCTACTTTGTTCATGAGGGTTACCAGGGTCTGGTGGATGGAGGTGACAACATCAAACTTGCCACCTGGGAGAGTGTGTCTATGATGCTGCATCTGGGTGGAACTGTGATTGGCAGTGCCCGCTGTATGGACTTCAAAGAGAAGTGGGGACGTCTGAAGGCCGCCTGCAACTTGGTCAAACTGGGCATCACCAATCTGTGTGTGATCGGCGGTGATGGCAGCTTGACTGGTGCTAACCAGTTCCGTACAGAGTGGAGCGAGCTGCTGGCTGACCTGACAAAAGGGGGAAAGATCTCAGCGGAGGAGGCTAATCGTTCTTCTCATCTCAACATCGTGGGCATGGTGGGCTCTATCGACAACGACTTCTGTGGCACTGACATGACCATCGGCACCGACTCCGCCCTGCACCGCATCATAGAGGTGGTGGACGCCATCACGACTACTGCACAGAgTCACCAGAGGACCTTTATCCTGGAGGTGATGGGCAGACACtgcggCTACCTGGCCCTGGTGACTGCTCTGGCCTGTGGTGCTGACTGGGTGTTCATCCCAGAAATGCCCCCAGAGGAAAACTGGGAGGAACATTTGTGCAAAAGATTGATTGCGcAAAGGGGGCGTGGTTCTCGTCTGAACGTCATCATTCTGGCAGAGGGAGCCCAGGACCGTAACCAGAAACCCATCACCTGTGACCAAGTCAAAAATCTGGTATCCAAGAAACTTGGCTTCGACACCCGTTCCACAATCCTGGGACACGTACAGAGAGGTGGCACCCCCTCTGCTTTTGACAgaatcctgGGTAGCAGGATGGGTGTGGAGGCTGTGATGGCTCTTTTGGAGGCCACCCCAGAAACCCCAGCCTGTGTTGTCAGTCTTTCTGGGAACATGGCCGTCAGGCTGCCTCTCATGGAGTGTGTCCAAGTGactAAAGATGTGACCGTAGCCATGACTGAGGGGAGATTTGAAGATGCTGTAAAGCTCAGGGGAAAGAGCTTTCAGAATAACTGGGACACATACAAAATGCTGGCTCACGTGACCCCCCCAGAAATGAAGagCAACATCAACATTGCCATTATAAATGTTGGCGCCCCCTGTGCTGGGATGAATGCAGCAGTGCGTGCAGCTGTCAGAGTCGGTATCATCCAGGGACATCAGATGCTAGCTGTACATGACGGCTTTGACGGCCTGGCTAACGGACAGATTGAGCCTATCATCTGGGCTCAAGTGGGTGGATGGACTGGGAAGGGAGGGTCCAATCTCGGTACCAAGAGacacctgccaggtAAAAACATTGAGCAAATCAGCCTGAACATTACCAAGTTCAACATCCATTCTCTGATCATCATCGGAGGCTTTGAGGCGTATCTGGGTGGTCTGGAGCTGGTGACAGCCAGGGAGATGTACGAGGAGCTGTGTATCCCCATGGTGGTCATTCCCGCCACCGTCTCTAACAATGTTCCTGGATCGGACTTCAGCATCGGAGCTGACACCGCCCTCAACACCATCACCATGACTTGCGACAGGATAAAGCAGTCTGCTGCTGGCACTAAGAGGAGAGTGTTCATCATTGAGACCATGGGGGGATACTGCGGTTACTTAGCAACCATGGCTGGCTTGTCATCTGGGGCTGATGATGCCTACATCTATGAAGAGCCTTTCCATATCCGTGACCTAGAGCTGAACGTGGAGCATCTGATAGAAAAGATGAAGACCTCAGTGAAGAGAGGCCTCATTCTCAGAAACTCTAATGCCAATGAGAACTACACCACACAGTTCCTCTACAACCTGTACTCAGAGGAGGGAAAGGGCACGTTCGACTGCAGGATGAATGTCTTAGGACACATGCAGCAGGGTGGAACCCCCAGCCCCTTTGACAGGAATTTTGGTACCAAGATGGGATCCAAGTCTGTCCTGTGGCTGACTAACAAGCTGAAGGAGTGCTACAGACACGGTCGTATCTTTGCCAACATGCCAGACTCAGCCTGTGTGCTGGGCATGAAGAAGAGATCCCTGGTCTTCCAGCCCCTGGCTTCCCTCAAGGATGACACTGACTTTGAgCACCGTATCCCAAAGACAGAGTGGTGGCTGAGGCTAAGGCCCATCCTGAAAATCCTGGccaaatatgacactgtggaaaTGGACACCTCTGAGGTGACTGCCATGGAGCATGTCATCAAGAAGACAGGCCTAGTCAAGGGGGgcaaaatgtaaacaaacaaataaacacacacatataaacacaaccTAACATAAACACATACATACCGACCCTTGGTATTGCATCTCGGCCCACCCACTCCTATGAAGAGAAAGGGATGGTAACAGTCAACCATTCAGTCAACAGATGTGTGTAGCATCTCAGTGTAGTCCTAGTGGTTATGAGGAAGAGACTGTACATACAGTTTATGTGTGGCGCTTTGAACTGTTCTACATCACAGAAGTCATTCTACACCATTCTGCAGAAACCCTGCAACAATACTGTGCAGATCTCTCAGTGGAGTCAGTCTAACACTTTTATCTCAAAGCCACAAAGACACTCTCGTGTGCTGTTTCCTGTGTCTGGCTCACTGCTTTCTCCCCTATTTGTATGGCAGAACAGTTTACAAAATGAAGACTTCTTTCTTGCATTGAAACTGAACTAGGATATGTAATTAAACTCTGCTTCATTTCTGGaggttttatttgtttttttgctACACACATGACATGATAAAAGATCATGTCAAATGTACTATCTTTAATGAATATCGAATATTTAGTGATAAAATAGTAACAATGTATTGCATAGAAAATGTGACAAATGTTTATCACAATAACTTACATAGTCTTTTATTAAATTATGCCTAATAGGCTGACTAAGTACAGCCAACCCAAATAATAAAATTGTAATGAATTTAGTAATtgaacaaataaaaaatgtaaggtATGGGTTCAAAAA

Function

NR:

description
ATP-dependent 6-phosphofructokinase, muscle type-like

GO: NA

KEGG:

id description
K00850 pfkA, PFK; 6-phosphofructokinase 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021609920.2 True 3208 mRNA 0.49 23 59132559 59157301
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110528101 LOC106583060 coding downstream 4113 59116448 ~ 59128446 (-)
LOC110527129 LOC106583068 coding downstream 27527 59099275 ~ 59105032 (-)
LOC110528100 mep50 coding downstream 38098 59085102 ~ 59094461 (-)
LOC110528098 LOC106583071 coding downstream 84662 59043271 ~ 59047897 (-)
eps8l3a LOC106583072 coding downstream 94833 59022694 ~ 59037726 (-)
LOC110528106 LOC106565518 coding upstream 160540 59317841 ~ 59324089 (-)
apof apof coding upstream 299232 59456533 ~ 59468742 (-)
os9 LOC106583228 coding upstream 347387 59504688 ~ 59516580 (-)
LOC110528115 NA coding upstream 382496 59539797 ~ 59541511 (-)
LOC110528116 LOC106583226 coding upstream 398759 59556060 ~ 59599625 (-)
G629777 NA non-coding downstream 27179 59105102 ~ 59105380 (-)
G629742 NA non-coding downstream 52743 59058693 ~ 59079816 (-)
G629313 NA non-coding downstream 82756 59049577 ~ 59049803 (-)
G629307 NA non-coding downstream 117886 59012582 ~ 59014673 (-)
G629804 NA non-coding upstream 23612 59180913 ~ 59223560 (-)
G629864 NA non-coding upstream 103428 59260729 ~ 59260999 (-)
G629869 NA non-coding upstream 109159 59266460 ~ 59266659 (-)
G629871 NA non-coding upstream 112561 59269862 ~ 59270217 (-)
G629889 NA non-coding upstream 141748 59299049 ~ 59299599 (-)
sfrs3 sfrs3 other downstream 418985 58707572 ~ 58713630 (-)
LOC110528083 LOC106583085 other downstream 436792 58691817 ~ 58695856 (-)
LOC110528069 LOC106583062 other downstream 703188 58425680 ~ 58437154 (-)
G628714 NA other downstream 1014437 58117190 ~ 58118122 (-)
G628575 LOC106579815 other downstream 1259228 57872050 ~ 57873331 (-)
G630132 NA other upstream 590149 59747450 ~ 59752591 (-)
G630227 NA other upstream 758678 59915979 ~ 59917551 (-)
G630747 NA other upstream 925745 60083046 ~ 60083857 (-)
LOC110528989 LOC106583145 other upstream 1581194 60699279 ~ 60822525 (-)
G631740 NA other upstream 2033407 61190708 ~ 61191045 (-)

Expression

LOC110528103(LOC106583067) Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 60.
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LOC110528103(LOC106583067) Expression in each Bioproject

Bar chart with 15 bars.
LOC110528103(LOC106583067) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 400.
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Co-expression Network