Item | Value |
---|---|
gene id | LOC110528118 |
gene name | prkag1 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048571.1 |
NCBI id | CM023225.2 |
chromosome length | 90918291 |
location | 59656971 ~ 59664214 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
symbol | description |
---|---|
prkag1 | Predicted to enable AMP binding activity; protein kinase binding activity; and protein kinase regulator activity. Predicted to be involved in cellular response to glucose starvation; protein phosphorylation; and regulation of catalytic activity. Predicted to act upstream of or within phosphorylation and regulation of protein serine/threonine kinase activity. Predicted to be part of nucleotide-activated protein kinase complex. Predicted to be active in cytoplasm and nucleus. Orthologous to human PRKAG1 (protein kinase AMP-activated non-catalytic subunit gamma 1). |
description |
---|
5'-AMP-activated protein kinase subunit gamma-1 |
id | name | namespace |
---|---|---|
GO:0016310 | phosphorylation | biological_process |
GO:0030554 | adenyl nucleotide binding | molecular_function |
GO:0016301 | kinase activity | molecular_function |
id | description |
---|---|
K07200 | PRKAG; 5'-AMP-activated protein kinase, regulatory gamma subunit |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036983667.1 | False | 2878 | mRNA | 0.43 | 13 | 59656971 | 59662754 |
XM_021609941.2 | False | 3106 | mRNA | 0.43 | 13 | 59656971 | 59663374 |
XM_036983668.1 | False | 2560 | mRNA | 0.43 | 13 | 59656971 | 59663861 |
XM_036983669.1 | True | 2605 | mRNA | 0.43 | 13 | 59656971 | 59664214 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110528116 | LOC106583226 | coding | downstream | 57346 | 59556060 ~ 59599625 (-) |
LOC110528115 | NA | coding | downstream | 115460 | 59539797 ~ 59541511 (-) |
os9 | LOC106583228 | coding | downstream | 140391 | 59504688 ~ 59516580 (-) |
apof | apof | coding | downstream | 188229 | 59456533 ~ 59468742 (-) |
LOC110528106 | LOC106565518 | coding | downstream | 332882 | 59317841 ~ 59324089 (-) |
LOC110528119 | rhebl1 | coding | upstream | 3187 | 59667401 ~ 59671567 (-) |
LOC110528120 | lmbr1l | coding | upstream | 8460 | 59672674 ~ 59694121 (-) |
LOC110528124 | LOC106565535 | coding | upstream | 62198 | 59726412 ~ 59729413 (-) |
LOC110528128 | LOC106583146 | coding | upstream | 226224 | 59890438 ~ 59895213 (-) |
ruvbl1 | ruvb1 | coding | upstream | 445660 | 60109874 ~ 60122317 (-) |
G630023 | NA | non-coding | downstream | 83635 | 59573070 ~ 59573336 (-) |
G629996 | NA | non-coding | downstream | 139723 | 59516972 ~ 59517248 (-) |
G629995 | NA | non-coding | downstream | 154817 | 59501878 ~ 59502154 (-) |
G629990 | NA | non-coding | downstream | 158604 | 59498131 ~ 59498367 (-) |
G629989 | NA | non-coding | downstream | 159164 | 59497594 ~ 59497807 (-) |
G630092 | NA | non-coding | upstream | 15288 | 59679502 ~ 59680142 (-) |
G630093 | LOC106581475 | non-coding | upstream | 15930 | 59680144 ~ 59680456 (-) |
G630094 | NA | non-coding | upstream | 16711 | 59680925 ~ 59681153 (-) |
G630096 | NA | non-coding | upstream | 18318 | 59682532 ~ 59682791 (-) |
G630101 | NA | non-coding | upstream | 29092 | 59693306 ~ 59693511 (-) |
sfrs3 | sfrs3 | other | downstream | 943397 | 58707572 ~ 58713630 (-) |
LOC110528083 | LOC106583085 | other | downstream | 961204 | 58691817 ~ 58695856 (-) |
LOC110528069 | LOC106583062 | other | downstream | 1227600 | 58425680 ~ 58437154 (-) |
G628714 | NA | other | downstream | 1538849 | 58117190 ~ 58118122 (-) |
G628575 | LOC106579815 | other | downstream | 1783640 | 57872050 ~ 57873331 (-) |
G630132 | NA | other | upstream | 83236 | 59747450 ~ 59752591 (-) |
G630227 | NA | other | upstream | 251765 | 59915979 ~ 59917551 (-) |
G630747 | NA | other | upstream | 418832 | 60083046 ~ 60083857 (-) |
LOC110528989 | LOC106583145 | other | upstream | 1074281 | 60699279 ~ 60822525 (-) |
G631740 | NA | other | upstream | 1526494 | 61190708 ~ 61191045 (-) |