XLOC_002495



Basic Information


Item Value
gene id XLOC_002495
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 657051 ~ 657406 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00005968
ATGGAGCTCTCTgcgttattgtatttattatcattgtatcGTATTTGTGTCGGTTATCATTTTACAGTCAGTTCTGTATAGCAGCAAAAGTTACGAAGCACAAAGGCTTTTTGATGGGAGCTGAAGTCTGCAGctctacaatgtttattttactagcgCACATTGTTACTCTCTAGGTAAACAAATAATCGCCTAACGAAAAGTTTGTTTTCAATCTAAGCATCTGCTTCtgcatttgaaaaaaatacaGAACTGTGATCATTAAATTCCCTGTTTGATTCGATAGgttacacgagctggattcactggtcagatgtgcTAGTAGCACACTGAGGACACCTGCTGGTTACAAGGGG

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00005968 True 356 lncRNA 0.39 1 657051 657406

Neighbor


gene id symbol gene type direction distance location
XLOC_002493 rfx3 coding downstream 15442 600164 ~ 641609 (-)
XLOC_002492 NA coding downstream 108850 546202 ~ 548201 (-)
XLOC_002491 NA coding downstream 235398 415997 ~ 421653 (-)
XLOC_002490 CU929346.1 coding downstream 283476 360237 ~ 373575 (-)
XLOC_002489 NA coding downstream 298344 356555 ~ 358707 (-)
XLOC_002496 bmpr1bb coding upstream 425555 1082961 ~ 1180314 (-)
XLOC_002497 pdlim5b coding upstream 530247 1187653 ~ 1276046 (-)
XLOC_002498 opn4xa coding upstream 637057 1294463 ~ 1320114 (-)
XLOC_002499 NA coding upstream 765835 1423241 ~ 1433140 (-)
XLOC_002500 WDR70 coding upstream 777550 1434956 ~ 1523289 (-)
XLOC_002488 NA non-coding downstream 302394 354093 ~ 354657 (-)
XLOC_002487 CABZ01049604.1 non-coding downstream 317024 339912 ~ 340027 (-)
XLOC_002501 CABZ01066320.2 non-coding upstream 883857 1541263 ~ 1544095 (-)
XLOC_002502 CABZ01066320.1 non-coding upstream 886757 1544163 ~ 1552789 (-)
XLOC_002504 NA non-coding upstream 1008936 1666342 ~ 1667630 (-)
XLOC_002505 NA non-coding upstream 1011738 1669144 ~ 1718637 (-)

Expression



Co-expression Network