LOC110528128 (LOC106583146)


Basic Information

Item Value
gene id LOC110528128
gene name LOC106583146
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 59890438 ~ 59895213 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021609951.2
TCAGTATGATGATGGAGGTTGAGGACACGCCCAGGGATGAGAAACTTGCCAAAGTAGAGATCGCGCTGCTCAGTGTTATCTTCGTAAGCGCCTCTATCCTGAACACCGGGCTATTACTGGTTCTGTGGAAGCGGCGCAAACAGGTCTCCAGGATGCGTGTCTTCGTGTTCCATCTGTGCATCGCAGACCTGGTGGTTGCGTTTTTCCAGGTTTGCCCGCAGCTCATGTGGGAAATTACTGACAGGTTCATTGGACCAGACCTGGTGTGCCGCTTGGTGAAGTATCTGCAGGTAGTGGGCATGTTTGCGTCCACCTACATGATTGTGGTGATGACCATTGACCGCTACCAGGCTATATGCAACCCCATGGTCAAGTTTCAGAGGAGGCACGCGCGCTGGAACATCCCAGTGTGCGTCGCCTGGACGATCTCCCTCGTGGGCGCCCTGCCTCAGATGTTCATCTTCTCGAGGGTCCAGGTGGCGCCCGGGGTGTTCGACTGCTGGGCGGACTTCATCCAGCCCTGGGGCCTGAAGACCTACATCACTTGGACCACGCTGGTCATCTTTATCTTACCCATTTTGACTGTGGTGGTGTGCCAGGTGCAAATATGTCGAGCCATCCAGGTCAACCTTTATCTAAAGACGCATCAGGAGGGGGGCAGCGGGGTGGCCTTTCGACTGCCCTCCAGAACCAGCAGCGTGACCGGGGTGTCCAAAGCACGAATCAAGACCGTGAAGATGACGGTGGTTATTGTGTTCGTCTATATCATCTGCTGGACTCCGTTCTTCATGGTCCAGCTTTGGTCTGTTTGGGACATTGACGCGCCGACAGAAACGACAACGTTCACCATCCTGATGCTGTTGGCGAGTCTGAACAGCTGCACAAACCCCTGCATCTACCTGCTCTTCAGCGGCCAGCTGCCCAAGAAGCTGGAAACGGTGCTGTGCCGGAGTCCGTCCGAAGTGAAAGACTCCATTAATGATGAGGCCGCGGTGGTCAGCTCGCTCTACGTGAGCTTCAAAAGCATGTCCGACTCCAAATAGAACGCACGGTTTTCAAATCCCCACGGTGTGTTGGGAAGCAAGTGACTAGAGGCACGCACAGTCAATAAGGTAACCAACGGCGAGTCAAGGGCAGTTCTGATGACGGGCCATTTACTCCCTCGATATCATGGTCAAGATGTATCAAGTGATATTTCGGGGACATTAAAGTACTCACTATAATGGAGCCAGAAATAGGTAGGATAATTGTAAGCGTACCGTAGGGTATTTGCGCAAATACGCGCCAAATCCTGGGGGGTAAACCGCCGCTAATGGATAAAGGCAGGCGGTTGGTGCTGTAGGCTGGTGCTGGGCGTCACAGGGAGCTAAATCACGGTTGTAAAACATCTGTCAGACAACATAGTAATGAGAGACATTGTGACAAGGTGTGGTCAACATGTCGGTGGAGTCCAGAAAATAGATTCGTTTGGTACCTTATGTGAATAATTTTCCAAATCTAACAAAATCCATGTTAACACCTGCAAATTGTTTGACAAAATATTGTATAGCAGGCATATAGAATTAATTTACTGCctgttattattgttatatttCATAAATACATTGTAAACGATCAAACTTTCATCATCAACATTGGAGAAGATGTTTAGTGCTTTtatgaatttgtatttatttatttaactaggcaagtcaggccAGTCAGAGACATGGTGAAATAATCCTTTACAAAATAGAAGCTGTGTGTTCACAGAGACAGTTCAAGTTGTAGCTTAACAAGACAGACCAACAGACCAACTTTAGAGTGCCCAGACATATTTTTGGTAAAACTTAACTTTGTACATATAAAAAACGATTTATGAAAGTCTTCTCTAATGTTCATCTTCTATGTTCTAAACTGAGAAAGACACCAATGATTTTGTAGTGCAAGCGATTATAAAATAAACTACCACATTTTTGTGTGTCAATAGCTAGGTTGTTTTCATccaacagattttcatgtgaattaATATTAAAGAATAAAAAAATCCGCATAATAACAATATGCGCATTTTCGCACTAAacatgtgtttccatcaaattgattTGTTGcacgataaaaaaaaaatacattgtaccgaataaaaaaatacaagttacatgggtttccatcgcattttcaactctacagaTGGTTTACTCACACAAAACAGCGCTTTGTTTAGCAAGTGTGCCTactctggtattggcacgtgcgctctagccaTATAGTAGATTCTGTACAGTACTATATCTGAGCGCTGTTGACTAGAGCGCacgtatagcctacatgatgagattattatggataaaagAGCGAGATTATAATTgttttgtcaaatggcagccaaacATCGATCatatgtcaccagaataagaccctcaatatgtATTGGAAAAAAGCAATAAACTCATCACAGTACACTTTCACCAttctgtgaagttcatcataatttatttcatctgcagtttaataaactgcatgcttccCGGAGTCGTAGTGGAAGGAACACACACGTTTACTTAGATATGATGGTTATTGCAGTATATCAAcatttgcgcataaaggcgtttccaccgcAATTTCTCGCATAATAAATTGTACAAAACGATCCCATTTTGTCTAGAGTATTTTGAAAGGTTTACCGACAAATTTTTGTTTTCATCATCTGTCACGACATTTTTTATCCAACATGTACTTTAGTAGCTTAAAAAGGTTGGATGTAAACCTGGTTACTGACAGCAATGGAGCTGGCATGAATAAGAACATACCTGGGACCAAGCTAGGTTTAGGAGCCTGGCAGACCGGTATGTATCTTTATAAGAGCTGCTTGCCATAGTTTCTCCCTGACTATAGCCTTAGGGTGTTTCACTCTTGGTCCCTTTCAGATCATTTTTTTGTTGCTTCGCTTATTTTCTTGTGCAGTGTGAATACGCCAAAGAAACGCAGACCGCTCAAAAGAGTCCCGGAAGCGAACCGAACTGTGCCGGTTTCAAGAAGTGGTCTGAGTTCGGTTCACTGCAGTTCCATTTTTCAGGGAAATGTTTTATGTATTTTACCAtgctttaactaggcaagtcagttaagaacaaattcttatttacaatgacagcctactagGGAAcaagggttaactgccttgttcaagggtagAACAGCAGATGTTTaacttgtcggctcggggattcgatcttgcaacctttacaagtccaaccactaggctacctgccgccccgttaGTAACACAAAACTCCCCCGGTTTGCTTGTCATTATTCCGCACCACCTTTTCATTGGTGCCACAATAGAGGgaagatgatgatgtgcaggttTGCAGAAAATAATGTGTGCTATTTTTGTATATTGATTAGTGATTGTCACTGATGCACAGTAATTCCAAAATATGTGTGGAGTTTTCAGTTCAGATTATTTGTTTGCTATATGTGCTCTATAAGAGAGCTTCATAAGATGTTTACTCGATTGTGGAGTTTGAATAGTGTTAAAGGCCACAacatactgtatttgatgagaatCACAACATAGGGTACAACATAAATTCTAGCTCTTAAATGGGCTGTAGCCTACATTGGGTGTACAATGATCAATTACAGCATTATTTAATCTGCAGTTATTCTTCTGTTGTTTATGCTGTTACCAATAATATTCACATGTTAATAATATCTTCTGATTGCAATTATTACATCATCTTTTAATTAAATGCAATAGATTAGCTtccaaaatgtttgttttttaaatgattttaagTAAGCTACCTGTACTGTATCTCTAGCTGTACGATAACATGTTCTGATGGAATGGCTTGACCTGTCCTTTGTAAAAACCCAGAGTGCATTGAGTGAATGTTGGGAAAAAAATGTTGGTTCCTTTCTAAACATTGCAATGTGAATGCAAAGAAGACTCGGACCACAAAATGGGTGAAGTGAACTGGCAAAAGAGTCCTCATTCAAAGGCAATGTGAATACAAAAATAACTGAGTTCACATTAAGAGGACTGAGATTGGTTATTTTAAAGAGGACTATATGTGGAACACTTTTACTCTACCCAAACTCGGTCATGGGTTTGGGAAATCCTGCTCTACAGTATGAACAGGTGATACAACAGAATAATGTGGCTTTCCAAGGGAATGGATATTAGCATATTTTCTGTTCCATTTAGAATGTTGCATTGGAAGAATGGTTTGTCAGATGCAGCGTTTCAAAGATCAATACATGTAATCAGAAAGCCGTTATTAGCTGTTCTTTTCCAGGATCAGTCACTGTGCAGCACTGGGAAACTCGACTGTACTGTCagcctgtcaatcaatcaatcacaggtaatgtgtatgtgtttgtaagCGATTTGGAGGCCAGTCTGAGGCCCCGCCCATGTCTATTTAACACAATCATGTCTACTGAACAAAGGGCTGTTAGAAGCAGAATGAAAAGGCTAACTGAAAGATTTGAAAAAGAAAGATTTGAAAAGTCCTTCACTAGTAAAGGTATGTGTTCAAGTTAGGGATGCACAGATGTGGAAATTCTGGGCCAatacttacagtgcatttggaaagtgttcaaacctcttgaatttttccacattttgttacg

Function

NR:

description
vasopressin V2 receptor-like

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0016021 integral component of membrane cellular_component
GO:0005000 vasopressin receptor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021609951.2 True 4620 mRNA 0.42 2 59890438 59895213

Neighbor

gene id symbol gene type direction distance location
LOC110528124 LOC106565535 coding downstream 161025 59726412 ~ 59729413 (-)
LOC110528120 lmbr1l coding downstream 196317 59672674 ~ 59694121 (-)
LOC110528119 rhebl1 coding downstream 218871 59667401 ~ 59671567 (-)
LOC110528118 prkag1 coding downstream 226224 59656971 ~ 59664214 (-)
LOC110528116 LOC106583226 coding downstream 290813 59556060 ~ 59599625 (-)
ruvbl1 ruvb1 coding upstream 214661 60109874 ~ 60122317 (-)
LOC110528140 LOC106583208 coding upstream 387431 60282644 ~ 60295290 (-)
LOC110528141 LOC106583207 coding upstream 435816 60331029 ~ 60336416 (-)
LOC110528144 LOC106583201 coding upstream 500751 60395964 ~ 60458245 (-)
si:dkey-197j19.6 LOC106583152 coding upstream 563297 60458510 ~ 60471468 (-)
G630245 NA non-coding downstream 1257 59888873 ~ 59889181 (-)
G630107 LOC108425565 non-coding downstream 88446 59800076 ~ 59801992 (-)
G630108 LOC106583219 non-coding downstream 92744 59793566 ~ 59797694 (-)
G630114 NA non-coding downstream 173285 59716862 ~ 59717153 (-)
G630044 NA non-coding downstream 175913 59713595 ~ 59714525 (-)
G630695 NA non-coding upstream 94475 59989688 ~ 59989977 (-)
G630705 LOC106583215 non-coding upstream 105298 60000511 ~ 60001246 (-)
G630706 NA non-coding upstream 106954 60002167 ~ 60002600 (-)
G630708 NA non-coding upstream 108555 60003768 ~ 60003972 (-)
G630712 NA non-coding upstream 114858 60010071 ~ 60010379 (-)
G630132 NA other downstream 137847 59747450 ~ 59752591 (-)
sfrs3 sfrs3 other downstream 1176864 58707572 ~ 58713630 (-)
LOC110528083 LOC106583085 other downstream 1194671 58691817 ~ 58695856 (-)
LOC110528069 LOC106583062 other downstream 1461067 58425680 ~ 58437154 (-)
G628714 NA other downstream 1772316 58117190 ~ 58118122 (-)
G630227 NA other upstream 20766 59915979 ~ 59917551 (-)
G630747 NA other upstream 187833 60083046 ~ 60083857 (-)
LOC110528989 LOC106583145 other upstream 843282 60699279 ~ 60822525 (-)
G631740 NA other upstream 1295495 61190708 ~ 61191045 (-)
G631687 emc3 other upstream 1302794 61198007 ~ 61199438 (-)

Expression


Co-expression Network