LOC110528141 (LOC106583207)



Basic Information


Item Value
gene id LOC110528141
gene name LOC106583207
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 60331029 ~ 60336416 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>XM_021609962.2
agagagggagagagatagtcagagagagagagggagagagaaagagagagagtcagagagagagagagagtcagagagagagagaggggattggtCAAGGAGATGGATGGATTGTGTGTGAccatgtgtctgtgcgtgtgtgtgtgtgtgagaatcagGAGGTGTGTGCGTTAGTGCGTGCCAGACAGCAGAGAGGCGCAGTTATCTAGGATTTTGAGCCAAAAGAACCTCactaacagaaagagagagagaaagagaaacagagggagagagaaaaaataggAAGAGAAGTCGAGGGGATGAAATtggtatatagatagatagaaagagacaTACACAGAGATCGGGATTACAGTAAGATTAGATTAAAAAAAGAgatagacatggagagacagaaaaagatgAAGTTCACACAGAAATAGAAGAAGGTTATATGGGCAGAGAGTGGAGGGACACCATCCAAGGCTTCAAACAAAGCATCAAGCCGACAGACTCAGGAGTGGAGTAGAAACCCATCAAGTacaactattttttttttaaaggacaagTGGCACCAAAGAGGTGTGGGCACCCAAATCCAAGAGGCTGGCAAGGCGGAACTGCTTTAAGGTGAAAACCGGTGTCGGGAGGCACAGTAAACGACGAAACTCAGAGTTGTCTGAGAGACTGAATTCTGCCAGCTTTTCAAATTATTTTAGTAGTTTTCCCATGATTCTACTGGGCTCAATCGGTGTGGTCCCACTActgctgtccctgtgtgtggGGGTTGTGTTGTCCCCCCCAGACGCACCCCCAGTCTGTCCCCACCCCCCTTGCAGGGACAGTTTGGTGGCCGCTCCGCCTGCGAGGATAGGGTCAGGGGGGTGTGAGGGGAGCCCTGGGACAGCGGGCTGCAGGGTGGTGGTTGCCCCCCTGGCTGCCTCCGACCCCCCTCTGAGGGAAGAACACAGACAAGAAGTCCGACAGGTCCAGCCCGAGGCAGGGGATGTGTCGGAGCGTCTGTTCCAGTTGCAACGATGTATGCATTCCTTCCAGGAGCCGGGGGCCCCCAAGGGCCAGGCAGGCCAGGGAGGGGACACGCTGGGGGCCATTCTGGCTCTGATGGCTGCAGTGCTGACAGAGTGTGACCTTCACTGTCACAGCCAGGCCCTCAGGGCTATGGCCAGACGACTGGAGGGGGCAGcggttgggagagagggagagaaagacttGCTACTACTATTGAGAAGCATCACACAACACCCTCCAACAgttgCCCCCTCAGTGAGGCTGCATCCTCAGGACTGTGCTGAGATCTATCGTTTGGGGATCCGAGAGAACGGAATCTACACCATCCAGCCTGACCCACACAGACCTGCAGTCGAAGCAGAGTGTGACATGGAGACGGCAGGCGGAGGGTGGACGATGTTCCAGCGTCGGAGAGATGGCTCGGTGGACTTCAATCGGACGTGGCAGGAGTATCGCGAGGGTTTTGGTTCCCCACAGGGAGAACACTGGCTGGGGAACGCAGCGCTGCATGCTCTCACCAACACTGGTCAACACCTACTGCGTATTCAACTGGAGGACTGGCACCAGCAGAAACGCCAAGCCACCTACAACACCTTTAGGGTGGCAACAGAGACACAGAActACCGTCTGACAGCACGGGAGTACTCTGGTGACGCGGGAAATGCCCTGAGCTACAGCAAACGCTACAACCACGACGGCCGAGCGTTCAGCACCAACGACCGTGATCATGACCGCTACACCTCGGGGAACTGTGCGCAGTACTACGGTGCGGGCTGGTGGTTCGATGCCTGCCTAGCGGCTAACCTGAATGGACGGTACTACCGCGGGCGCTACAGCGGACTGACCAACGGCATTTACTGGGGCACTTGGTACATCCTGACAGACAGCCGCAGTGGAGAGCGCTACTCCTTTAAGAGTGTGGAGATGAAGACACGCCCACGCAACTTCTAATAATTAATGACTTGGGAGCAGATTGAAATGGGACAGTTAATGTGAAGTAGCAATCTATAAAATGTAGGCTTACTACATACTCTGAGTCAGGTTCTGTATATATaaatctagcctggtcccagatctgtttgtgatgtGCTCCAGCCAGGGAAACACTCATCTGGTTGCAGAGTGTGTGAAGGTTATTGTTAACCAGCTGATGACTGGATGTTTGATTCACTGGATGTTGGGATAGTGAGAGCCATTAAATCACTTCTTCCAGGTGTAAATATAGTGctaaatggaaaagtggttagaTGTCTCTGTCCTTATTTATAATTCAAGTATGTATTGAAGAAGTTGAATTACACCATTAACCAGCAGACTATGTGATCATAAAGGCTCATGGGTTCCTCACCCCTGCTTCATGTGTATTATCCATCAGTCAAGCCAAGTACTTTGCCACCCCACATCTTTTTGTTGTCGTGATGTTTAAATGGCAGTAAAGttttcatacagtatgttatgcaaATCTTTCCACAAATTTGAAATGTAGAAATGTACATTGACAATCATGGCTTTAGTATAGAGAAATTATTATTGAAATACATTTCTATAACATTTGTAACCATTGACTTGAGTTATTGTGTCTCTGAATATGGT

Function


NR:

description
fibroleukin-like

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XM_021609962.2 True 2601 mRNA 0.50 6 60331029 60336416

Neighbor


gene id symbol gene type direction distance location
LOC110528140 LOC106583208 coding downstream 35739 60282644 ~ 60295290 (-)
ruvbl1 ruvb1 coding downstream 208712 60109874 ~ 60122317 (-)
LOC110528128 LOC106583146 coding downstream 435816 59890438 ~ 59895213 (-)
LOC110528124 LOC106565535 coding downstream 601616 59726412 ~ 59729413 (-)
LOC110528120 lmbr1l coding downstream 636908 59672674 ~ 59694121 (-)
LOC110528144 LOC106583201 coding upstream 59548 60395964 ~ 60458245 (-)
si:dkey-197j19.6 LOC106583152 coding upstream 122094 60458510 ~ 60471468 (-)
LOC110528145 LOC105017320 coding upstream 142272 60478688 ~ 60487941 (-)
uroc1 uroc1 coding upstream 154359 60490775 ~ 60500443 (-)
LOC110528150 LOC106583199 coding upstream 176156 60512572 ~ 60530678 (-)
G630788 NA non-coding downstream 91702 60176578 ~ 60239327 (-)
G630794 NA non-coding downstream 139192 60191327 ~ 60191837 (-)
G630776 NA non-coding downstream 180699 60150015 ~ 60150330 (-)
G630775 NA non-coding downstream 183329 60147490 ~ 60147700 (-)
G630774 NA non-coding downstream 183731 60146950 ~ 60147298 (-)
G630886 NA non-coding upstream 33745 60370161 ~ 60370452 (-)
G630902 NA non-coding upstream 151634 60488050 ~ 60575476 (-)
LOC100136654 ip6k2 non-coding upstream 225091 60553435 ~ 60563412 (-)
LOC110528989 LOC106583145 non-coding upstream 363064 60699279 ~ 60822525 (-)
G631214 NA non-coding upstream 492970 60829386 ~ 60829648 (-)
G630747 NA other downstream 247172 60083046 ~ 60083857 (-)
G630227 NA other downstream 413478 59915979 ~ 59917551 (-)
G630132 NA other downstream 578438 59747450 ~ 59752591 (-)
sfrs3 sfrs3 other downstream 1617455 58707572 ~ 58713630 (-)
LOC110528083 LOC106583085 other downstream 1635262 58691817 ~ 58695856 (-)
G631740 NA other upstream 854292 61190708 ~ 61191045 (-)
G631687 emc3 other upstream 861591 61198007 ~ 61199438 (-)
G632459 NA other upstream 1354832 61691248 ~ 61691644 (-)
G632994 LOC106583176 other upstream 1884856 62221272 ~ 62222445 (-)

Expression



Co-expression Network