LOC110528152 (LOC106583196)


Basic Information

Item Value
gene id LOC110528152
gene name LOC106583196
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 60639865 ~ 60669084 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036983692.1
TTGGCTGCGCTTCTATGAGCGGCAGCCAGCTGCAGTGCATGTGTAATCTATGCGTTTCGTTTGATTGATCCATGTGTGGGATGCTTCATTCTGTGTAGAGACAATGAGCTGATTTCGTCTAGAGAGGGAAAACGCTAAAAGGTTGAGGAATTAATTGATTTATGAACAGAAAAAGGTCGGTACTAACCTCTCTTTCTTGTCCCATGGAGGATTTCGTACCAATCCCGCGCTAAAGGCGCGAAATTATTCCGGTCACGTCGCGCGCTGAAAGCGGGCTGTCCTGGAGCTTTGGTGCTCTGTGCACGCGAGAGATAGCGCAGCGCGCGGACACCTGCAGTAGAATGTAGCGGGAATTCCCCTCCTAAACCGGCGCAAGGAGAATTTCCGTGAACTGCACACCACTCAATCACCCTCACCGGGGTCCCGTCACAgccaagagaaagggagagggcgGGAAATGGGCTGGCGTGGCCATTGCTATGCGTGAGCGAGTGCCGCGGTGTCCATGGAGACCAAGGGCTACAGCAACCTTCTGGAGACTAGCGATGGGCAGGGGACGGGGCTTCTGGAGGGTGGAGACTCGCCGGGGGCTGAGGAGGGTTGGAGCCCCCCCTTACCCCTGGGCTTTCAGGTGTCCCTCACCAGTGTGCTGATGCTGGAGTTGGTGCTGGGATTCAGCAGCAACCTGACCGTGCTGGTGCTCTACTGCGCCCAGTCCAACCTGGTCGACTCGGTCAGCAACATGGTCACGGTCAGCCTGCACGTGCTGGACATCCTGGTGTGTTTGCTGTGTCTGCCGCTGACTGTGGCGGTCATCCTGCTCCCAGCAGACGGTAGTGGCGGGGGCAGCCTGGCTACACTGTGCTGCTTCCATGAGGCCTGCGTCACCTTCACCAGTGTGGCCACGGCCATTAATGTGCTGGTCATCAGCCTGGACCGCTACGACATCTCCGTCCGGCCAGCCACACGGCTGTTGACCCCGCGGCGAGCTGCACTCCTCCTGGCTGCTGTCTGGGCCATGTCATTGGCTGTCTTCTTCCTGCCCTTCCTGGAGGGGGATTTCTTCTTCTCGGGGGTGGAGGTGGAAGACagcgagggaggaagaggagggggggagatggACATGGGGGATCTAACCTCTGGCCCAGAATCTGACCCTGAGACCCCTACTGGGCTGACCCCCACTCGGCTAAACCCTACTGGGCTgaccctcaccccctcctccccctctactccctacTATAAACACCACCTGCCGCCAGTGTGGCAGAACCGGACACTGCTGTGTGTAGGGGGGCAGGGCTACCACACGGGGCTGGCCATGTACTACCACCTTCTGCTGCAAGTGCCCTGCTTCTTCATCGCAGTCATTGTCATGCTGTTCACATACTACCGCATCCTGCAGGCCCTCAACATCCGCATCGGCACCCACATCAAGAGGGGCCCACGGGCCTCCAATAAGGACTCAGGCTGCAGGATCCGTAGGCGGAGACGAAGGAGGAAGGGGCTGAGTCTGGCCACAGAGGGGGGAGGTTCCTCCAGCCAGAACCAGCACCTCACCCACCCGCCCCTCATTCCAtctcccacccccacccccacctccccCCCACCCTTCTCCTCTATGCCCCTGGTCATCTCTGACAGCGGGGCCACGGGGGTCACCAACACCGCCGCCACCACccccattaccaccacaccagcgaCCCCTGCCCCCCAGGCCCCAACCTCCACTGACGCCACCTCCCCCCCTCCGGTGACGGCAGACCGCCCAGGTGTCCAGGCCTCTGTGTCAGCCATCATTGCCTTGAGGCGGGCCGTGAGGCGCCACCGAGACCGGCGGGAACGCCAGCGGAGAGTCTTCAAGATGTCCCTTATCATAATCTCCACCTTCCTGGGCTGCTGGGCTCCTCTGTCCATGGTCAACGTGTTGATCCTGTGCATGGGCCCCAGTGACAGCCTGGTACGTGTGAGGCTCTGCTTCCTGGCCATGGCATATGGCACCACCATCTTCCACCCGCTGCTCTATGCCTTCACCAGACAGAAGCTGCGTAAAGCGCTGAAGACCCGTGTCAAGAAGAGGGTGGTGTCCCTGCTGCAGGTGGACCCAGCACCCAGCGGGGGAACTGTTATTCACAACTcctgggtggaggggggaggacagaggaagggacgCAAGCCTCGACTGGAGGGCAGTGATGCCACCAGTAACTGTCTGACAGTGGCTGTGAGAGAATGatagggtgtgtgtctgtgtgtatgtgtgtgtgtttgtctgtgtttatgtatgtgtctgtttgtgtgtgtgtgtgtctgtatgtatgcgTACATGTGATAGTTGACAAAGGTCAGGAGACATCATTagctcctccctccatccaggtGTGATGATGGCAGGTGAGCCCAGAGCTCTAATTAATGTCAGACCTGCTCTGTGATATACACAGCTCCTCATTAGTTCCCCAGGCAAGATGCCTGCTCCGTCTCCATGGCAACACCAAGCTACCAAGCAATATGTGACATCACCTGCTCCGCCACAACCTTAGTTACTTTTGATACATTCCAGTACAGGTAAACAGCAACAATCCACACAATCCATACATGCAGGCACATTGATCAACCTGTAGTCGTTCACGGAGCAAGTAAGCACACAATATCTGCCTGCACACAGAACTCAGTGAGAGTCAATATCCAGTGACATTTTATAATTTGATTAGTCATGCCTTAATTCAGTTCCTAATTGATTCCCATGGTTCTGAATGTTTTCTGTATGTGTATTGTGTTTAcaagaatggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgatcatgtgATCATGTGATCATGTGCAATAAAGCTTCAACAGTGGCTGAGCCTCCCCAGAGAGGAAAAGGCAAAGCGAGAAAAATCTGTTCACGAAAATAAGACTACGAAGTGAGGAATTTTTGTACTGAGGGCAATGAGTGtcaaatttggtcaacaaaaaatgtTATTGCTAATTTGCTACATGAGGCTTATTTGATTGTATTAAAGTTTTGTAGTGGTTAGGTTGTTAAGAATTCACTGATATAAGTGGATGCACGTGGCATCTTGGCACGTGAGAGCAGTTACTCGACTCTCTTATCAATATAATAGATAATCTTCAACCTCCCTGAGGATGTGAACAAAGCATTGTGAGATTGTTCTCATGCTTTATCTCATGGGCTAGACTACAGAAGAGGGAAGGACTTCATCTGTTGATTGACTGCGATACCCTGTTGCCATGGCGATATTGGTGGAGCACCTGACATGATACCTGCGAAGATAACCTCCAAACCATGTAGAACTGTAACCATGTGATTAGAACATGGTGCTCATTTACTAGTGAAACATCAATTTTATAGAGGACTTTTAGGAATCAAAGGGCAATATTTGGTAACCCTCACAACTGTTTATCAATGGGACAAGTCAACAGAGTGGAACACTGCTGTGAACCACCCCAGGCCCCAAAGATAAGTCCTGGAGCAGCTCTTGAGGGttgttttctctctgtgtctccctcctcctcagggATTTATATCAATCTCCCTCTGAAGCATGTTGAACATCAGTTACACCCTTGCACCAGCCCTCATTCACTTATTCTGATAGGTATTCGCTTAGTTATTGCCATGCGGGTAGGCTACATATGATCAACAGTTTGGGTAGACTATGTATGGCTCTCAAGTGTGAAGGAATTTTTTCAGGCTTGTTTGTTGGGTACTATAATATAGGTCATTTTTCTCTCCCGTTGTTCCCTCTTTCTTCACTTTGGAGCCAGATGGAAGGAATGGATtcctgtgtatttatatatatgtacatGATCAGGGATGTAAATACTTGAATATCTAGCTCTTAGGGGTTTGAGTGGTTGGAGTGTTTTGGGTTGCAGCAGTCATCTGTTGGCCATAATATCAGCCTTGGTAAGTGAGAGGGCGAGAAGACACGTGGAAGAGATCAAACATCTAAATGTATTGTGTTTCTGTATATGTGTACTGTACATGGTCATGTATATAGAGATATGATAGTATTGTATATCATTTAAATtgtgttattgtattgtatttcttATTAGAAAAGAACAAAGTCTGTATTAAAGAAATTGACTATTTACTGTA

Function

NR:

description
PREDICTED: probable G-protein coupled receptor 22

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036983692.1 True 4143 mRNA 0.51 2 60639865 60669084
Loading

Neighbor

gene id symbol gene type direction distance location
trnaf-gaa-79 NA coding downstream 12564 60627229 ~ 60627301 (-)
LOC100136654 ip6k2 coding downstream 76453 60553435 ~ 60563412 (-)
LOC110528150 LOC106583199 coding downstream 109187 60512572 ~ 60530678 (-)
uroc1 uroc1 coding downstream 139422 60490775 ~ 60500443 (-)
LOC110528145 LOC105017320 coding downstream 151924 60478688 ~ 60487941 (-)
LOC110528989 LOC106583145 coding upstream 30195 60699279 ~ 60822525 (-)
LOC110528153 LOC106583194 coding upstream 261217 60930301 ~ 60933747 (-)
LOC110528154 gnai2 coding upstream 276980 60946064 ~ 61041619 (-)
LOC110528155 LOC106583192 coding upstream 386305 61055389 ~ 61128517 (-)
LOC118965385 NA coding upstream 487634 61156718 ~ 61158861 (-)
G630902 NA non-coding downstream 64389 60488050 ~ 60575476 (-)
G630886 NA non-coding downstream 269413 60370161 ~ 60370452 (-)
G630788 NA non-coding downstream 400538 60176578 ~ 60239327 (-)
G630794 NA non-coding downstream 448028 60191327 ~ 60191837 (-)
G631214 NA non-coding upstream 160302 60829386 ~ 60829648 (-)
G631238 NA non-coding upstream 177916 60847000 ~ 60847202 (-)
G631253 NA non-coding upstream 186347 60855431 ~ 60855779 (-)
G631321 NA non-coding upstream 216715 60885799 ~ 60888175 (-)
G630747 NA other downstream 556008 60083046 ~ 60083857 (-)
G630227 NA other downstream 722314 59915979 ~ 59917551 (-)
G630132 NA other downstream 887274 59747450 ~ 59752591 (-)
sfrs3 sfrs3 other downstream 1926291 58707572 ~ 58713630 (-)
LOC110528083 LOC106583085 other downstream 1944098 58691817 ~ 58695856 (-)
G631740 NA other upstream 521624 61190708 ~ 61191045 (-)
G631687 emc3 other upstream 528923 61198007 ~ 61199438 (-)
G632459 NA other upstream 1022164 61691248 ~ 61691644 (-)
G632994 LOC106583176 other upstream 1552188 62221272 ~ 62222445 (-)

Expression

LOC110528152(LOC106583196) Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 4.
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LOC110528152(LOC106583196) Expression in each Bioproject

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LOC110528152(LOC106583196) Expression in each Sample
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The chart has 1 Y axis displaying Expression. Range: 0 to 150.
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Co-expression Network