Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118965385 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 61156718 ~ 61158861 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: RNA-binding protein 5-like isoform X3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005052712.1 | True | 1772 | mRNA | 0.43 | 3 | 61156718 | 61158861 |
61,155,200
61,155,600
61,156,000
61,156,400
61,156,800
61,157,200
61,157,600
61,158,000
61,158,400
61,158,800
61,159,200
61,159,200
61,159,600
61,160,000
61,160,400
61,160,800
61,161,200
61,161,600
61,162,000
61,162,400
61,162,800
61,163,200
NC_048571.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110528155 | LOC106583192 | coding | downstream | 28201 | 61055389 ~ 61128517 (-) |
| LOC110528154 | gnai2 | coding | downstream | 115099 | 60946064 ~ 61041619 (-) |
| LOC110528153 | LOC106583194 | coding | downstream | 222971 | 60930301 ~ 60933747 (-) |
| LOC110528989 | LOC106583145 | coding | downstream | 334193 | 60699279 ~ 60822525 (-) |
| LOC110528152 | LOC106583196 | coding | downstream | 487634 | 60639865 ~ 60669084 (-) |
| LOC110528156 | NA | coding | upstream | 79 | 61158940 ~ 61164665 (-) |
| LOC110528157 | brk1 | coding | upstream | 22404 | 61181265 ~ 61186850 (-) |
| gpx1 | gpx1 | coding | upstream | 76618 | 61218553 ~ 61237064 (-) |
| LOC110528164 | LOC106583182 | coding | upstream | 383142 | 61542003 ~ 61557188 (-) |
| LOC110528165 | LOC106583181 | coding | upstream | 475336 | 61634197 ~ 61749981 (-) |
| G631710 | NA | non-coding | downstream | 18206 | 61138209 ~ 61138512 (-) |
| G631709 | NA | non-coding | downstream | 21014 | 61135439 ~ 61135704 (-) |
| G631462 | NA | non-coding | downstream | 107482 | 61048989 ~ 61049236 (-) |
| G631417 | NA | non-coding | downstream | 205048 | 60950729 ~ 60951670 (-) |
| G631414 | NA | non-coding | downstream | 211136 | 60945121 ~ 60945582 (-) |
| G631721 | NA | non-coding | upstream | 1118 | 61159979 ~ 61160196 (-) |
| G631725 | NA | non-coding | upstream | 9803 | 61168664 ~ 61168974 (-) |
| G631727 | NA | non-coding | upstream | 12968 | 61171829 ~ 61172050 (-) |
| G631730 | NA | non-coding | upstream | 15660 | 61174521 ~ 61175002 (-) |
| G631731 | LOC106581475 | non-coding | upstream | 16227 | 61175088 ~ 61175339 (-) |
| G630747 | NA | other | downstream | 1072861 | 60083046 ~ 60083857 (-) |
| G630227 | NA | other | downstream | 1239167 | 59915979 ~ 59917551 (-) |
| G630132 | NA | other | downstream | 1404127 | 59747450 ~ 59752591 (-) |
| sfrs3 | sfrs3 | other | downstream | 2443144 | 58707572 ~ 58713630 (-) |
| G631740 | NA | other | upstream | 31847 | 61190708 ~ 61191045 (-) |
| G631687 | emc3 | other | upstream | 39146 | 61198007 ~ 61199438 (-) |
| G632459 | NA | other | upstream | 532387 | 61691248 ~ 61691644 (-) |
| G632994 | LOC106583176 | other | upstream | 1062411 | 62221272 ~ 62222445 (-) |
| LOC118965309 | LOC106583169 | other | upstream | 1349358 | 62506239 ~ 62520518 (-) |
