gpx1 (gpx1)


Basic Information

Item Value
gene id gpx1
gene name gpx1
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 61218553 ~ 61237064 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>NM_001124525.1
TACCAGGCAAATGGCTGTATGTAAGATGTTCTACGACCTGACAGCAAAGCTCCTTACAGGAGAATTGTTTAATTTCTCGTCTCTTCAGGGTAAAGTGGTGCTGATCGAGAATGTGGCGTCTCTCTGAGGCACGACCACCAGGGATTACACCCAGATGAACGAGCTCCATGAACGGTACGCCGACAAGGGGCTAGTGATTCTGGGGGTGCCCTGCAATCAGTTCGGACATCAGGAGAACTGCAAGAACGAAGAGATCCTGATGTCCTTAAAGTATGTCCGTCCGGGAAATGGCTTTGAGCCTAAGTTCCAGCTCCTTGAGAAAGTGGATGTGAATGGGAAGGACGCCCACCCACTGTTTGTGTACCTCAAGGATAAGCTGCCATTCCCAAGCGACGAGCCCATGGCCTTAATGAATGACCCCAAGTGCATCATCTGGAGTCCAGTCTGCAGGACTGACATCGCCTGGAACTTTGAGAAGTTCCTCATTGGGCCAGCTGGAGAGCCATTCAAGCGTTATGGCAGGAGATTCCTTACCAGCAACATTGAGGGTGACATCAAGGAGCTTCTCAATACGGCTAACTAAACCGTCCATGTTGGTCACACAGAAGCAATGGTGGGGAGTGGAAATCATGTCAATGACTTGTAATGGCTTTTCAAATTATTAAGTATTGTCACACTTTGGGACATGTGCTTGGCCATAACTTAAAAAATAAACAACTTTCAACAGCTCCCCATTCAACAAATACTTCCTCCATACAAGATTAGCTTCTGTGTGACAGCAGCACACCCATTACCTTTTCACATCATGTGCCGTGCTCTCATATGCAAAAAGCTGCTGTGTTCTGAACTTTTATTAAATGAAGGCATCCATTGAAACCAAGCCTTTTGTGAGAGGGATGTCTGATGAAATGTAAAAGACTTAACATAACAGTTGCCTTTGGCCCATGTAAAGCACGACTGTGTTTCAAGAAGTGTAAGAAGTTGGCCAAATAAATTATTTTCCCCTT
>TU718214
TTCCGTGTTGATACCTTGTATAAAAAGTCCAACAGAGCATTTTCGCAGACAGAAGCGGGGAGTGACATTTACCAGGCAAATGGCTTTGGCCATAACTTAAAAAATAAACAACTTTCAACAGCTCCCCATTCAACAAATACTTCCTCCATACAAGATTAGCTTCTGTGTGACAGCAGCACACCCATTACCTTTTCACATCATGTGCCGTGCTCTCATATGCAAAAAGCTGCTGTGTTCTGAACTTTTATTAAATGAAGGCATCCATTGAAACCAAGCCTTTTGTGAGAGGGATGTCTGATGAAATGTAAAAGACTTAACATAACAGTTGCCTTTGGCCCATGTAAAGCACGACTGTGTTTCAAGAAGTGTAAGAAGTTGGCCAAATAAATTATTTTCCCCTTTaaaaaaaaaaagagatgcagagggagagaaagacagagagacaaatatTGACTTCGACACAGATGGTATGACTGCCATCCACTCTGAAATCGAAGGCGTCGCAGCAGTATGTACAAAGACCACTGTTTCTAGGTCCCCATTAAAAAAACTGGTCTTGTTTTGAGAACCACCTCAATGACTCAAGAGTATAGGCAAATATCTTATTTACTTTGCAGACCTCATCACGAAAACAAACACAATAGGGGCACCTCTGAACATTAACCATACACAGACACTATATTTGAATAAAATTCAACTAGCCCAGGTTTAAACTAATGAATGTTTTGTCTAAGGCTGTGCTTAAGAAtattacactaccgttcaaaagtttggggtcacttagaaacggTAGTGTAGATGGTCCACTAAGAGTATCAGAAACCTTGACATTCTAATAACACCCAGCCACAGGGATATTGTTGGAGAGAATATGAAACCCTTTCTTCTAAAAATGAAGGACTTTGCTAGATGGGCAAATATATACATTTCATTATGGGGTAAAATGTATTCTATTAACACAATGCTGGCACCTGTAATATATTATCCTCTACCTCAtctccctctatatatcccagATAATTACTTTGAAGatacctacaaagcattacatgggcttgctcctacccatctctctgatttggtcctgccgtacatacctacacgtacgctacggtcacaagacgcaggcctcctaattgtccctagaatttctaagcaaacagctggaggcagggcattctactatagagctccatttttatggaatggtc
>TU718215
TTCCGTGTTGATACCTTGTATAAAAAGTCCAACAGAGCATTTTCGCAGACAGAAGCGGGGAGTGACATTTACCAGGCAAATGGCTTTGGCCATAACTTAAAAAATAAACAACTTTCAACAGCTCCCCATTCAACAAATACTTCCTCCATACAAGATTAGCTTCTGTGTGACAGCAGCACACCCATTACCTTTTCACATCATGTGCCGTGCTCTCATATGCAAAAAGCTGCTGTGTTCTGAACTTTTATTAAATGAAGGCATCCATTGAAACCAAGCCTTTTGTGAGAGGGATGTCTGATGAAATGTAAAAGACTTAACATAACAGTTGCCTTTGGCCCATGTAAAGCACGACTGTGTTTCAAGAAGTGTAAGAAGTTGGCCAAATAAATTATTTTCCCCTTTGTGTTGTCTGTCTTCGTCTTTTACAGGAGTTTCATGTGATTAATGCTCAGGTCAAATGTGAAAGTGTGGCATGAGCAAAAATGTGCTGTTGCCTTTAGATGAGGATCTTTGGTCAGTTAATATTTTCCCCACTTAGGGTCAAGGtaaggattggg

Function

symbol description
gpx1 Enables SH3 domain binding activity; glutathione peroxidase activity; and phospholipid-hydroperoxide glutathione peroxidase activity. Involved in several processes, including UV protection; icosanoid metabolic process; and negative regulation of apoptotic process. Located in mitochondrion. Colocalizes with Lewy body. Implicated in several diseases, including anemia (multiple); cardiovascular system disease (multiple); hematologic cancer (multiple); nutritional deficiency disease (multiple); and pseudoxanthoma elasticum. Biomarker of Huntington's disease; artery disease (multiple); diabetic angiopathy; inflammatory bowel disease (multiple); and nephrosis.

NR:

description
glutathione peroxidase 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
NM_001124525.1 False 1007 mRNA 0.46 2 61235479 61236995
TU718214 False 1211 lncRNA 0.40 3 61218553 61237064
TU718215 True 557 lncRNA 0.40 2 61235323 61237064

Neighbor

gene id symbol gene type direction distance location
LOC110528157 brk1 coding downstream 48629 61181265 ~ 61186850 (-)
LOC110528156 NA coding downstream 70814 61158940 ~ 61164665 (-)
LOC118965385 NA coding downstream 76618 61156718 ~ 61158861 (-)
LOC110528155 LOC106583192 coding downstream 106962 61055389 ~ 61128517 (-)
LOC110528154 gnai2 coding downstream 193860 60946064 ~ 61041619 (-)
LOC110528164 LOC106583182 coding upstream 305008 61542003 ~ 61557188 (-)
LOC110528165 LOC106583181 coding upstream 397202 61634197 ~ 61749981 (-)
LOC110528991 LOC106583180 coding upstream 563683 61800678 ~ 61921139 (-)
LOC110528169 LOC106583177 coding upstream 922980 62159975 ~ 62175491 (-)
LOC110528170 LOC106565587 coding upstream 938986 62175981 ~ 62185946 (-)
G631743 LOC106583188 non-coding downstream 10673 61223581 ~ 61224806 (-)
G631685 NA non-coding downstream 35027 61199582 ~ 61200452 (-)
G631732 NA non-coding downstream 59392 61175822 ~ 61176087 (-)
G631731 LOC106581475 non-coding downstream 60140 61175088 ~ 61175339 (-)
G631863 NA non-coding upstream 137725 61374720 ~ 61378603 (-)
G631864 NA non-coding upstream 142093 61379088 ~ 61379392 (-)
G631866 NA non-coding upstream 144375 61381370 ~ 61381669 (-)
G631867 NA non-coding upstream 144897 61381892 ~ 61382105 (-)
G631868 NA non-coding upstream 146078 61383073 ~ 61383394 (-)
G631687 emc3 other downstream 36041 61198007 ~ 61199438 (-)
G631740 NA other downstream 44434 61190708 ~ 61191045 (-)
LOC110528989 LOC106583145 other downstream 487380 60699279 ~ 60822525 (-)
G630747 NA other downstream 1151622 60083046 ~ 60083857 (-)
G630227 NA other downstream 1317928 59915979 ~ 59917551 (-)
G632459 NA other upstream 454253 61691248 ~ 61691644 (-)
G632994 LOC106583176 other upstream 984277 62221272 ~ 62222445 (-)
LOC118965309 LOC106583169 other upstream 1271224 62506239 ~ 62520518 (-)
si:dkey-28n18.9 LOC106583160 other upstream 1769780 62983119 ~ 63008072 (-)
LOC110528212 LOC106583293 other upstream 2548777 63785772 ~ 63827547 (-)
G631730 NA non-coding downstream 43551 61174521 ~ 61175002 (-)

Expression

gpx1(gpx1) Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 750.
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gpx1(gpx1) Expression in each Bioproject

Bar chart with 21 bars.
gpx1(gpx1) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 30000.
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Co-expression Network