LOC110528159 (LOC106583187)


Basic Information

Item Value
gene id LOC110528159
gene name LOC106583187
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 61255912 ~ 61376237 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021609987.2
CGTCCTACCACAGATGATCAATGAGCCAGATATCTCACAGGATGTATACATGTGAAGCATCCTGTTGGCGTTTcaactcactaccaaatatgatGAGGAGGAAGCCCAgcggccggcagtgggagaagatggagcgagatggattttggccaagattctgcaaatgttctcattgatgaaacatttgatctgcATATAGTTTTCTGTTTACAAAACTAAAATTGGTAACAAACAGTGTGGTATGCGTTTCGTATAAtgtaccctttgccaaagtttctAAAAATTGGGATGTTTAAAAGGAGTGCAAGAGCGGGCTTTTATTATTGCCCATGCGCacttcagagtaggcgttccctaacgaaTAGATGCAAATAAATTCTAaaacgcgccaataggatctcactagcttgtgcttggctctgcccacctccgtGCTTGTGCTGCAGactatgattaatttgctccattggaaacgacaggctctggtctatcttgggttagttataaaaatcttTCGCCCTACCTTCAGTTATCACGGAAAATCGTATGAATGCAAACAACAGTTATACGGATTATTCTCGTTTTTACATCACAAGCAATTCATATGCATCTTCTTTTCAAATCTCGGGGATATCTTATTCATGACGTTTGCGCTTTGTAGTTTGTAGACTGTCCGCAAATTTGTACATTCCGAGGAGGCTCTTCTTGACACTTCATATAGAGCTTGACATAATCAAAATAGAACGTTTCACTTGGAAGAGGTTGAGTTGCATCAGTGGCACCAGTGTTAGTGTAGAAAATGTCTGACTCTATTATTTTAGCACTGATAGTGTTTCTCATCTTGTGTTTGATTGTAACGGTGGTTGCAGCTGTTGTGTACTCTGGGCTGTTCACTGAGGTCAATATCAAGACAGGGTCGCCTTATATCAAAAACGTTACTATTGCCTACAAATTCCATAAAGGACCGTATAAAGACTGTGGTGCAGCTTTCACAGAGACTGTCAGTATTGGACCAAAGCTCAATACCATCCGTGTGTCCTACGATGACTCCACAGAGgtgcccGATGACCAGTGTCGCTACATCATTGGCAGTATCCTGAGCGAGGGAGATGAAAAGCCTGACGAAGATCTCCAGAAGCTGTATGAGAAGTTTGGCTTCAATGTGCTGTCCTTCCCCGAGGTGTCCCTGGCTGTGACCACCACCTTTCCCTCCACCACCCCCCTGTCCCACTGGCTGGCACCCTACAGAGTATACCCCGAACTCCGCAACTACATCATGGAGAGGCAACTCCATGCTTGGCCATTCATTGAGATCAATACAGGGGACCTAACGCACTACATTGCTCCGCTGTCCTCCCAGAGCGGCTTCCACCACACTGGCTTCGTTGTGCCCGAGCTCGTCACACAGACAGCGGCCAAGACACCGGTGACAGAGGAGTCCTTGGACCAGGACAGAGGGACGGATATTTCAGGTGCAGAGTCCCACAGTGATGTCAGCAGCAAGCTGAGCAGCCAGGCGCAGTCAAAGAGCACAGAGACGTCTCTGGCCCACAGGGACCAGGGGGACGGGGTCGAACAGGGGCAGGGTGGAGAGCACAGGGAGCCAAGTGAAAAGGGGCATGGGGACAGGGGCTCCAGCGAGTCAGTGGGCAGCGGCTCTTCCTTTGAGGAACTGGACTTGGTGGAAGAgatggtggaggagctggagagagagttggggagggaggaggaaggccCCACAGTGAAGGAAGGATCAAGGGAAGCCCCAGTAGAGGCTGTAGCTGAGGAGAGGGAGCCCGTAGGGGATGGAGAGGAGTAGAAGGGGATGGATGGAGCAAACTCCTCGGGTTTGATCCTTTTAAGGTGGGAGTGAGATTTCTTCAGCTAATCTTGTCTTTTATGTCAACTTGTTGGTGGATCTGTAGCCATACTATTTATCATGACAGACATGACATCTATTTCTGGACCTTTTGAACTTTCCTGTATGTTAAACTGTAATGTCTGTGAGtgataatgacaaaacaaagatgGGTTGATCAACATTAAACAGAACTGTTGTAGGAGATGATACATTCACCAGTAGAAAGTGATACATTCTTTGAGGGGACAAAAATATTGTTACAATATACTTGTGGGACTGATGAAAGTCAAAATGTCTTTTGATTGAAGTATTTAAATGTTAATAACATTGTGTCCAATATGTTTAATCATTTGATGTAAGATAATttgtttatatataaatataaataattgaatatactgtatttaatcGAATACAGTATAGTTTTAGACAGTGGTCACCAATCGCTCGATCGATGCATTCCTAGTTGATCACCTAACTGAAAAGCCAACGATAAAGGCTATGACAAAGGCCGCCActcctttttgtgtgtgtgttatgctgttggtggtacagtaggtacacttgattcagaagccctgtgtGCCGGGGAGGAGAAGTGTTCCCATTTTTAACCATTTAATTTGTCTGAAAAGactaactgcttactgactgaccaatcggatagctcaaatcaTGTACCTACAGCTTCCAGGACCCCGGCCACAGTAGTTTTATACTAGCCTACATGAGAtttcatataatttaaaacaaTGACCATAGAGAGACTGTCAAATAATACAGCAAATAGCTGATGTTTTTATGTGTGAGGTCATGTCCAAGTttgtattcagcactgtcaacactgtttttattcaacgctattacaaaacataaaacacgcTTCTCCCTGCTTCCATTCTCaatgcagctgcaatgaatgagtagccaagtgTATCGATAGCCCTGTGTTTTTATTATTATCAGCAGCTCATCATGTCTATTTTAATATGGAGGAGTATTTCACTTTCcctggtcataggaacaacatgagtttgtgcatgaggcagatgcaGTGTGACTCGACTTttgccatcaggtggaagacgtTTTCCCGTTTCccgatttcatgtaatggacatatacaaaatattccaaa

Function

NR:

description
testis-expressed protein 264-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021609987.2 True 2999 mRNA 0.44 4 61255912 61376237

Neighbor

gene id symbol gene type direction distance location
LOC118965308 NA coding upstream 485 61250093 ~ 61255427 (+)
LOC118965359 fancd2 coding upstream 7693 61245922 ~ 61248219 (+)
LOC110528158 LOC106583188 coding upstream 22508 61200887 ~ 61233404 (+)
pob pob coding upstream 55452 61196718 ~ 61200460 (+)
LOC110528988 LOC106583198 coding upstream 620514 60631612 ~ 60635398 (+)
LOC110528160 LOC106583186 coding downstream 9331 61385568 ~ 61470736 (+)
parp3 parp3 coding downstream 111696 61487933 ~ 61514684 (+)
LOC110528161 LOC106583185 coding downstream 139119 61515356 ~ 61520408 (+)
LOC110528162 LOC106583183 coding downstream 157710 61533947 ~ 61539719 (+)
LOC110528166 NA coding downstream 323735 61699972 ~ 61707326 (+)
G631568 gpx1 non-coding upstream 4210 61235478 ~ 61251702 (+)
G631575 NA non-coding upstream 66110 61189385 ~ 61189802 (+)
G631573 NA non-coding upstream 67243 61188308 ~ 61188669 (+)
G631572 NA non-coding upstream 68023 61187635 ~ 61187889 (+)
G631599 NA non-coding downstream 4893 61381130 ~ 61381796 (+)
G631997 NA non-coding downstream 134099 61510336 ~ 61512131 (+)
G632027 NA non-coding downstream 151499 61527736 ~ 61528197 (+)
G632014 NA non-coding downstream 153598 61529835 ~ 61611282 (+)
G632082 NA non-coding downstream 236837 61613074 ~ 61613299 (+)
G630515 uroc1 other upstream 759483 60492277 ~ 60496429 (+)
G630516 NA other upstream 772855 60468931 ~ 60483057 (+)
G630327 NA other upstream 1107531 60147817 ~ 60148381 (+)
mustn1a NA other upstream 1146622 60107071 ~ 60109290 (+)
G632146 NA other downstream 315044 61691281 ~ 61691647 (+)
G632776 NA other downstream 763279 62139516 ~ 62139991 (+)
G632809 LOC100194703 other downstream 854278 62230515 ~ 62231349 (+)
G632817 NA other downstream 869683 62245920 ~ 62329061 (+)

Expression

LOC110528159(LOC106583187) Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 6.
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LOC110528159(LOC106583187) Expression in each Bioproject

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LOC110528159(LOC106583187) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 150.
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Co-expression Network