LOC110528160 (LOC106583186)


Basic Information

Item Value
gene id LOC110528160
gene name LOC106583186
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 61385568 ~ 61470736 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021609988.2
GCGTTCGTGTCTGTTGAATTCTGTTGTGGCTGTCAATATGACAGTTCAGTTCACATGATAGCCTATGGACTCGTGTGAccgttttaaaaatgtaaaattatGCATGGTAAAGAAATCATGAGTTGACTCCTTAAAATATCATGCACCCGGGATCAGATATGTTTCATTCCTCGACTCATCCTTTCTACCAGGCTCATTGATAACACTTGACTCATTTGTTATCAAATAAGATTTGTTGCACAGCTGAGTTATGAGGTGTGGACGCGCAGTTAGTAATCTGAAGGGACTCAAGTGAGTATAATGTTAAATTAGTACCAGAGGTGTGTAAAAAGGTGGGTAGACTTTTTAACCAGGGGATAGAATCTCAAGGAATCCGCGCGCTCCTCCGAGTGTTTTTCAGCACCGAGGACAGTTACTCATGCGCGCCGCAGCTGCGAGGCGCGAAAACTTCATTCACTCTCATCCCCTGTCCTTCCTTCCTCCACCATCAGTATCCACGAATGGTTTATTCTGCACAATAACACGATATTTATTGAAAGTATCACCAAGGATATGAAGTGCCTGACCTAATCTGTGTAACCTGTCGGATTTGAATTCGTTCAGAAGAGAGATTCATTGGACAGGCCGTAATCTCCAGAACTTTGAAGACAATGCTATTGATGCAGTAGATGGCCTCAGACAGGACAAAAAAAAGCTAGCTCTTTGAGATCTCGTGCCCCGCTTCTCTGTGCCTTGCTAGCGTACTGTACCCTCCCCAATTCCAGAGACAGAGGAAATCAGAAGAAGAGAAGCACCAGACAGCAGTGATCTGACTCACACAGGGCCCAGGGACATGTCATCGGGGAGGTCCCCTTGGTTGGGGCTGCGCCCCCTGCCCCAACCgctccacctctcccccctctgcctactgtgtgtgtgtgtgtacctcctgGCCCAGGCCCCACTGGGTCTTTCCATGTCAGGTTTCAACACGGACACCAAGAGAGAGATCACAGTGGATGGAGACCTGATCATAGGGGGTCTGTTCCCTGTGCACCAGAAGGGCGAGGGGCCTGAAGACTGTGGGAAGATCAACGCTCAGAGAGGGATTCAGAGACTGGAGGCCATGTTGTTAGCCCTGGACGAGATTAACAAGGACGAGCACCTGCTGCCGGGGATACGGCTGGGAGCCCACATCCTGGACACCTGCTCTAAGGACACTTACGCCCTGGAACAGAGCCTGGAGTTTGTCCGTGCCTCCCTCACCAAGGTGGACGACAGTGAGTACACTTGCCCTGATGGCTCCTACGCCATCCATGACGACGTCCCTCTGGCCATCTCTGGGGTGATAGGAGGCTCCTACAGCGACGTCTCCATACAGgtGGCCAACCTCCTTCGTCTCTTCCAGATCCCTCAGATCAGCTACGCCTCCACCAGCGCCAAGCTCAGCGACAAGAGCCGCTATGACTACTTTGCCCGCACGGTGCCCCCTGACTTCTATCAGGCCAAGGCCATGGCAGAGATCCTGCGCTTCTTCAACTGGACCTATGTGTCAACCGTGGCATCGGAGGGCGACTACGGCGAGACGGGCATCGACGCCTTCCAGCAGGAGGCCCGCGCCCGCCAGATCTGTATCGCCACCTCAGCCAAGGTCAGCCGGTCGATGAACCGCTATAGCTATGACCAGGTGATCCATTCGCTGCGGCAGAAGTCCAATGCCAAGGTGGTCATTCTCTTCACACGCAGCGAGGACGCCCGGGAGCTGCTGGTGGCTGCCAACCGATCGAACGCGTCCTTCACCTGGGTGGCCAGCGATGGCTGGGGGGCGCAGGAGATCGTGGTGAGGGGCAGCGAGGCTGTGGCGGACGGGGCCTTTACCATCGAGCTGGCCTCCTACCCCATCCCCCAGTTTGCTGAGTACTTCACGGGCCTGAATCCCTACAACAACACACGTAACCCCTGGTTCAGGGAGTTCTGGGAGAATAGATTCCAATGTAGCCTCCATGACCTGGGCTGTGGGAAGCACTCTCTGCGGGATGGCCTGTTTGAGCAGGAGTCCAAGATCATGTTTGTGGTGAACGCTGTCTATGCCATGGCCCATGCCCTGCATAACATGAGGCAGTCGCTGTGCCCCAACTCCACCACCAAGATCTGTGACGCTCTGAAGCCAGGCAATGGCAAGAGGTTCTACAGGGAGTATATCCTGAAGACCAAGTTTGACGCCCCATTCCGTCCAGCAGACACAGAGAACATGGTGAGGTTCGATATCTTTGGAGACAGCTTAGGCCGCTACAACATCTTTCACTACCACAAAGAGGACGGACGCTACGTCTACCGTAAGGTGGGCTACTGGGCCCAGAATCTGACCCTTAACACCAGCCAGATCCCCTGGGAAGGCCATGCCGCACCCACCTCCCAATGCAGCGACCCCTGCAGGAAGAACGAGGTGAAAAGCATGcagcctggagatgtgtgctGCTGGATCTGCATCCCCTGCCAGCCTTACCAGTACTTGAAGAACGAGTTCACCTGCGCCGACTGCAAGTTTAGCGAATGGCCCCTGGCCAACCTGACAGGCTGCTACAACCTACCAGAGGAGTACATCCGCTGGGAGGACGCCTGGGCTATAGGCCCTGTTACCATTTCCTGCCTGGGCATGATGTGTACACTCTTCATCATTGGCCTCTTCCTCAAGCACAACGACACCCCTGTGGTGAAGGCCAGCGGGCGGGAGCTGTCCTACATCCTCCTGCTGGGTGTTCTGATGTGCTACAGCATGACCTTCATCTATATCTCCAAGCCCTCCATGGCTGTGTGTACCCTACGTCGACTTGGCCTGGGCACCTCCTTCGCTGTGTGCTACTCTGCGCTTCTCACCAAGACCAACCGCATCGCACGCATCTTCAGCGGGGTGAAGGACGGAGCCCAGCGGCCGAGGTTCATCAGTCCTGCCTCGCAGGTGGCCATTTGCGGGGGTCTGATCTCCTGccagctggtggtggtggtggtctggCTCCTGGTGGAGGCCCCGGGGGTCAGGAAGGAAGTGAACCCCGAGAGGAGGGACATAGTTACCCTCAAGTGCAACAGCAAGGACTCCAGTATGCTCATGTCCCTCAGCTACAACTGCATCCTCATCATCCTCTGCACTGTCTACGCCTTTAAGACCAGGAAGTGCCCCGAGAACTTCAACGAGGCCAAGTTCATTGGGTTCACCATGTACACCACCTGTATCATTTGGCTGGCCTTCCAGCCCATCTTCTATGTCACGGCCAGCGACTACAGGGTGCAGACCACCACCATGTGTATCTCTGTCAGTCTGAGTGGCTCGGTGGTGCTGGGCTGCCTCTTTGCCCCTAAGACCCACGTCATCCTGTTCCAGCCCCAGAAGAATGTCACCTCTCTCAGGGTGGCCACTACCCGCTTCAGCGTCACCACCGGCCCCGGATCCAGCTTCTCTCAAGCTTCAGCCTCCAATATTGTGCCAACGGTGTGTAACGGGCGAGAAGTGGTGGACTCCACGACTTCCTCCTTGtgaagactgactgactgagcctcACGTTCCTCTGCTGACAAACATTGTATACAGAGTTCTATAACCACTAGTCCAGAATCAGCTGTTTCAGATATTAAAGAGGTCACACAGAAGATTGTCCTGATTTTGTTGTCCTCTAAGTGCTGTGAGTACAATGTCCCGATTCTGTTTCCATTCTATGACTAGTAGCGATTTTAAAAAGAGATGCCAATAAAGATTCCGTATCATAGCCCTTCTTTTTATTGAAGATTTTACTAGAGACATGGAGTAAATTATGGTAAATTTGTTAAATGTAATATATACAAGATGTTTTTAATGTAGATTTTGGTGAACCGGTTTGTGCTTTCTTGTAATTTATGTAAATAAAAGGTGTTTTTTATTCATATGAAAACTACATATGGGTTGACTATTCTATAACTCTCATACACAGGCTGTCTGACTGAAACGAAATGGGTTGTAGTTAAACTGTCACTCAATCAAAAGACACATTACGTAACACAAAGACAACAAGGAGGACATCGAACTCTAGTCTGTAGAGGCAGAAAGATATAATGTTGGATGTAA
>TU718347
CCCTGTCCTTCCTTCCTCCACCATCAGTATCCACGAATGGTTTATTCTGCACAATAACACGATATTTATTGAAAGTATCACCAAGGATATGAAGTGCCTGACCTAATCTGTGTAACCTGTCGGATTTGAATTCGTTCAGAAGAGAGATTCATTGGACAGGCCGTAATCTCCAGAACTTTGAAGACAATGCTATTGATGCAGTAGATGGCCTCAGACAGGACAAAAAAAAGCTAGCTCTTTGAGATCTCGTGCCCCGCTTCTCTGTGCCTTGCTAGCGTACTGTACCCTCCCCAATTCCAGAGACAGAGGAAATCAGAAGAAGAGAAGCACCAGACAGCAGTGATCTGACTCACACAGGGCCCAGGGACATGTCATCGGGGAGGTCCCCTTGGTTGGGGCTGCGCCCCCTGCCCCAACCgctccacctctcccccctctgcctactgtgtgtgtgtgtgtacctcctgGCCCAGGCCCCACTGGGTCTTTCCATGTCAGGTTTCAACACGGACACCAAGAGAGAGATCACAGTGGATGGAGACCTGATCATAGGGGGTCTGTTCCCTGTGCACCAGAAGGGCGAGGGGCCTGAAGACTGTGGGAAGATCAACGCTCAGAGAGGGATTCAGAGACTGGAGGCCATGTTGTTAGCCCTGGACGAGATTAACAAGGACGAGCACCTGCTGCCGGGGATACGGCTGGGAGCCCACATCCTGGACACCTGCTCTAAGGACACTTACGCCCTGGAACAGAGCCTGGAGTTTGTCCGTGCCTCCCTCACCAAGGTGGACGACAGTGAGTACACTTGCCCTGATGGCTCCTACGCCATCCATGACGACGTCCCTCTGGCCATCTCTGGGGTGATAGGAGGCTCCTACAGCGACGTCTCCATACAGgtGGCCAACCTCCTTCGTCTCTTCCAGATCCCTCAGATCAGCTACGCCTCCACCAGCGCCAAGCTCAGCGACAAGAGCCGCTATGACTACTTTGCCCGCACGGTGCCCCCTGACTTCTATCAGG

Function

NR:

description
metabotropic glutamate receptor 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021609988.2 False 4078 mRNA 0.52 6 61385568 61470736
TU718347 True 1020 TUCP 0.55 3 61386032 61446747

Neighbor

gene id symbol gene type direction distance location
LOC110528159 LOC106583187 coding upstream 9331 61255912 ~ 61376237 (+)
LOC118965308 NA coding upstream 130141 61250093 ~ 61255427 (+)
LOC118965359 fancd2 coding upstream 137349 61245922 ~ 61248219 (+)
LOC110528158 LOC106583188 coding upstream 152164 61200887 ~ 61233404 (+)
pob pob coding upstream 185108 61196718 ~ 61200460 (+)
parp3 parp3 coding downstream 17197 61487933 ~ 61514684 (+)
LOC110528161 LOC106583185 coding downstream 44620 61515356 ~ 61520408 (+)
LOC110528162 LOC106583183 coding downstream 63211 61533947 ~ 61539719 (+)
LOC110528166 NA coding downstream 229236 61699972 ~ 61707326 (+)
LOC110528992 NA coding downstream 501218 61971954 ~ 61996298 (+)
G631599 NA non-coding upstream 3772 61381130 ~ 61381796 (+)
G631568 gpx1 non-coding upstream 133866 61235478 ~ 61251702 (+)
G631575 NA non-coding upstream 195766 61189385 ~ 61189802 (+)
G631573 NA non-coding upstream 196899 61188308 ~ 61188669 (+)
G631997 NA non-coding downstream 39600 61510336 ~ 61512131 (+)
G632027 NA non-coding downstream 57000 61527736 ~ 61528197 (+)
G632014 NA non-coding downstream 59099 61529835 ~ 61611282 (+)
G632082 NA non-coding downstream 142338 61613074 ~ 61613299 (+)
G632096 NA non-coding downstream 153942 61624678 ~ 61625133 (+)
G630515 uroc1 other upstream 889139 60492277 ~ 60496429 (+)
G630516 NA other upstream 902511 60468931 ~ 60483057 (+)
G630327 NA other upstream 1237187 60147817 ~ 60148381 (+)
mustn1a NA other upstream 1276278 60107071 ~ 60109290 (+)
G632146 NA other downstream 220545 61691281 ~ 61691647 (+)
G632776 NA other downstream 668780 62139516 ~ 62139991 (+)
G632809 LOC100194703 other downstream 759779 62230515 ~ 62231349 (+)
G632817 NA other downstream 775184 62245920 ~ 62329061 (+)
LOC110528175 LOC105017014 other downstream 869285 62325429 ~ 62342019 (+)

Expression

LOC110528160(LOC106583186) Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 2.
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LOC110528160(LOC106583186) Expression in each Bioproject

Bar chart with 19 bars.
LOC110528160(LOC106583186) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 75.
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Co-expression Network