parp3 (parp3)


Basic Information

Item Value
gene id parp3
gene name parp3
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 61487933 ~ 61514684 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036983706.1
CTGGAGGCTGGCTCACCCATCACTAGTCTCCTCGAGGCAAATGTCATGTCAGTAAGGCAGGGCTCAGgtcaggtactgtaggtaggCTGGTGTAAATCACATTCAATGCTCTATAATGTACATTTGTATTTGCAACTTTCTGGATGCcgcttacccccccccccccccccccccccccccccctctaaaaGCGGAAGTAGAACTTCCTCGACAGTCGTTGAGAAGTGTGCCTGTCAAAATATTTTGTTCTGCTACTTCTGACAGTGACCGCTCGAGCTGCCGAATACCTGCTCTAAGTGATTTAAATACAGATAAGGGATGGCACCAAAGAGAAGGGCTGCCTCATCCACCAAAGCCAATAAAGTGGGTGGAAAGAAGGTCAAGCAAGAGCCTGACACACCAAAGGATGCATTTACCTCTGCCAAAGAGGCTCtgaaggctgcagggccagaagTGAAGGGCAAAAGGAAGGCTGATGAGCACTGCTTGCTGTCAGAACAGCATTCAGGAAGGGTGTATGAAGATTATGATTGCATGCTGAATCAGACCAACATTGGAAATAACAACAACAAGTTTTATGTCATTCAAGTGTTGTGTATAGATGACTCTTACTACTGCTGGAACAGATGGGGAAGAGTGGGGGAAACAGGCCAGTCAAACCTATCAGACCTCTCCAACAGCCCAGACAAAGCCATCAAAGACTTTGAGAAGAAGTTCAAAGACAAGACGAAAAACAGCTGGAAGGAGCGGGACAACTTTGTGTCTCACCCGGGGAAGTACACCCTGATAGAGGTGGATGGAGACCAGGATGCAGAGGTCAAGGTGGACTGTGTTGATGGGAAGATTGGCAAGGGCCCCAGAAACATCCTTCCTTGTACTCTGGACAGCCCCACGCAGAAGCTCATCCAGCTCATCTTCAGCAATGACATGTTCAAAGAGGCCATGGAGTGCATGAACCTGGACATAAAGAAGATGCCCCTGGGGAAGCTGAGCAAGATGCAGATTGCTAAGGGCTTTGAGGTGCTGGAGGAGATTGAGGGAGCCATTAACGCCAGCAGGCCCAAACTGGAGGAACTCTCCTCCAAGTTCTTCACCACCATCCCACACAACTTTGGACGCGCCAGGCCCCCGGTCATCGACAGTTCTGAGATcgtggagaagaagaaggagatgcTTCTGGTGCTGGCTGATATAGAGATAGCCCAGAATTTGAAGGCTGAGACTGAGAAGGCCCAGGAGCAGATGGAGGTGGAGAAAGTACCTCATCCACTGGACCAAAACTATCTGTCTCTCAGCTGCAAACTTGCTCTACTACAAAGAGATACACAGGAATTCAAGCTAATAGAGAAATACCTGAAGGCCACTGCATATAGCCACAACCAGCCAAAGATTATAGATGTCtgggaggtggacagagagactgagGCGGAGAGATTCAGGGAGAACGACGGTCTAGAGAACCGGCGTCTGCTGTGGCATGGTACCAATGTGGCGGTGGTGGCAGCCATCTTGAAGGGCGGGCTGCGGATCATGCCCCAGTCAGGGGGCCGTGTGGGCAGGGGCATCTACTTTGCCTCGGAGAACAGCAAGTCAGCTGCATACGTGCGTACATCTAAAGACAGGGGGGTGATGTTTCTGAACGAGGTGGCGCTGGGGAAGGAAAACACCATCACTATGGACGACAGCTCCCTGAAGGAGGCTCCTACCGGCTACGACTGCGTGGTGGCTAGAGGACGGTTGGAACCAGACCCCTCTAAGGACGTCTTCCTGACTCTGGATGGTAAGCAGGTGGCTGTGCCTCAGGGTAAGCCCATTAAGCAGCCCCAGTACAAGGACAGCTACTTTTCCAACAGCGAGTATTTGGTCTACAAGGAGAACCAGTGTCGCATCCGCTACCTGCTGGAGCTCAAGTTTTAaccggagagaggagaggcacctATGCACTCTAGGAGAGGGATGTCTAATTGGTAGAGTATCAAGAGTATTGTTCAAATGAAGGTGGTTGTTGTTAGACCTCACTGTCACTGAGTACCATATTCAACCAAAGTTGTCTATAATGTATCAGATATACTTCTCTGTGCCTTATGCTTTACACAACAGGCTTTGAAGTCTTCTATTGTCAGTTTTAGTTGCAAGTCATTGGTGATTCTACTCTTAAACGAAGTATAAATACTGCACTCTCACTTAAAATTATAATCCTTATTGTAATTCCTTTAGTCTACAATATTTACTTTGAGCAGACCATAGTATTGTGGATTTTCAATGTTATTGTACTATTTGGCCACTCATTTCTGTTATGGGAGCACTATTATCTTTACCTTTACTGGATGTAGTGTGAATACTGTACCTTTACTAATATGCAATACAATATCTACCTGTATCTTTATTTTGCACTATATGTTTTCATTTAGCTGTGAGTATTTCCTACTCTGAATATACTTGTATAAAGCTTCATTTCCACGTACCTACTTTGTGAAAACATCTCTCTTCAGTAACTGTTTGAATGTTAGTGCATGCAACATAATTCAATACACTAGATAGGCCTATATGCTGTATTGGCATGAAATAAAATGCGTGATTGAAGGAATAACTGTAGAGTTGATCTGTATGTTTATAGAAGTTTGATTTGCATGTAGTGTGTGTCTATGAAGGAGATTTGTGCAGCTTTGAAAATCTATAATCCCAGTGCACTCTATGTTAATAATATTCATGTGCTACCTAGCAAGGCTCTGAAAGTTCCTGTGGTGATGATCAATGCTCTTGTCTCAGTTTATACATTTTCCTGGGCCTGGGTCCAGATTCACAAAGTGTCTCGAGTAGGAGttgtgatctaggatcagttttgccttttaaatCGTAATGAATAATTGGAGGGTGATCTGATTCTGGATCAGCACTCGAACTCTGAGACGCTATAAGACTATGGGGCTGTTTATTGCACACAGCAGCCTGTTGAGAGAATGTCCTTCTGCCTTGTAACCAGGAGGTGTCACTAGTGAACACTCAGTCTCAGACCACCTCTCTGAGCCTTTTTGCACCTGATCTATTTACTTGAAGGCTCAATAAACAAATAACCCTCCA
>XM_036983707.1
GAAGTAGAACTTCCTCGACAGTCGTTGAGAAGTGTGCCTGTCAAAATATTTTGTTCTGCTACTTCTGACAGTGACCGCTCGAGCTGCCGAATACCTGCTCTAAGGTCAGGGAATTTACCAGCCACGTCAAAGCTTGTCTGCTGTTTCTGCTGCTACTTCTGTGTTACTGGAAGTACCACGCCTCACTCAGCTGTATCAAAACACCACTGCCATTGGCCAGTGTGCCAGAAAAGTGATTTAAATACAGATAAGGGATGGCACCAAAGAGAAGGGCTGCCTCATCCACCAAAGCCAATAAAGTGGGTGGAAAGAAGGTCAAGCAAGAGCCTGACACACCAAAGGATGCATTTACCTCTGCCAAAGAGGCTCtgaaggctgcagggccagaagTGAAGGGCAAAAGGAAGGCTGATGAGCACTGCTTGCTGTCAGAACAGCATTCAGGAAGGGTGTATGAAGATTATGATTGCATGCTGAATCAGACCAACATTGGAAATAACAACAACAAGTTTTATGTCATTCAAGTGTTGTGTATAGATGACTCTTACTACTGCTGGAACAGATGGGGAAGAGTGGGGGAAACAGGCCAGTCAAACCTATCAGACCTCTCCAACAGCCCAGACAAAGCCATCAAAGACTTTGAGAAGAAGTTCAAAGACAAGACGAAAAACAGCTGGAAGGAGCGGGACAACTTTGTGTCTCACCCGGGGAAGTACACCCTGATAGAGGTGGATGGAGACCAGGATGCAGAGGTCAAGGTGGACTGTGTTGATGGGAAGATTGGCAAGGGCCCCAGAAACATCCTTCCTTGTACTCTGGACAGCCCCACGCAGAAGCTCATCCAGCTCATCTTCAGCAATGACATGTTCAAAGAGGCCATGGAGTGCATGAACCTGGACATAAAGAAGATGCCCCTGGGGAAGCTGAGCAAGATGCAGATTGCTAAGGGCTTTGAGGTGCTGGAGGAGATTGAGGGAGCCATTAACGCCAGCAGGCCCAAACTGGAGGAACTCTCCTCCAAGTTCTTCACCACCATCCCACACAACTTTGGACGCGCCAGGCCCCCGGTCATCGACAGTTCTGAGATcgtggagaagaagaaggagatgcTTCTGGTGCTGGCTGATATAGAGATAGCCCAGAATTTGAAGGCTGAGACTGAGAAGGCCCAGGAGCAGATGGAGGTGGAGAAAGTACCTCATCCACTGGACCAAAACTATCTGTCTCTCAGCTGCAAACTTGCTCTACTACAAAGAGATACACAGGAATTCAAGCTAATAGAGAAATACCTGAAGGCCACTGCATATAGCCACAACCAGCCAAAGATTATAGATGTCtgggaggtggacagagagactgagGCGGAGAGATTCAGGGAGAACGACGGTCTAGAGAACCGGCGTCTGCTGTGGCATGGTACCAATGTGGCGGTGGTGGCAGCCATCTTGAAGGGCGGGCTGCGGATCATGCCCCAGTCAGGGGGCCGTGTGGGCAGGGGCATCTACTTTGCCTCGGAGAACAGCAAGTCAGCTGCATACGTGCGTACATCTAAAGACAGGGGGGTGATGTTTCTGAACGAGGTGGCGCTGGGGAAGGAAAACACCATCACTATGGACGACAGCTCCCTGAAGGAGGCTCCTACCGGCTACGACTGCGTGGTGGCTAGAGGACGGTTGGAACCAGACCCCTCTAAGGACGTCTTCCTGACTCTGGATGGTAAGCAGGTGGCTGTGCCTCAGGGTAAGCCCATTAAGCAGCCCCAGTACAAGGACAGCTACTTTTCCAACAGCGAGTATTTGGTCTACAAGGAGAACCAGTGTCGCATCCGCTACCTGCTGGAGCTCAAGTTTTAaccggagagaggagaggcacctATGCACTCTAGGAGAGGGATGTCTAATTGGTAGAGTATCAAGAGTATTGTTCAAATGAAGGTGGTTGTTGTTAGACCTCACTGTCACTGAGTACCATATTCAACCAAAGTTGTCTATAATGTATCAGATATACTTCTCTGTGCCTTATGCTTTACACAACAGGCTTTGAAGTCTTCTATTGTCAGTTTTAGTTGCAAGTCATTGGTGATTCTACTCTTAAACGAAGTATAAATACTGCACTCTCACTTAAAATTATAATCCTTATTGTAATTCCTTTAGTCTACAATATTTACTTTGAGCAGACCATAGTATTGTGGATTTTCAATGTTATTGTACTATTTGGCCACTCATTTCTGTTATGGGAGCACTATTATCTTTACCTTTACTGGATGTAGTGTGAATACTGTACCTTTACTAATATGCAATACAATATCTACCTGTATCTTTATTTTGCACTATATGTTTTCATTTAGCTGTGAGTATTTCCTACTCTGAATATACTTGTATAAAGCTTCATTTCCACGTACCTACTTTGTGAAAACATCTCTCTTCAGTAACTGTTTGAATGTTAGTGCATGCAACATAATTCAATACACTAGATAGGCCTATATGCTGTATTGGCATGAAATAAAATGCGTGATTGAAGGAATAACTGTAGAGTTGATCTGTATGTTTATAGAAGTTTGATTTGCATGTAGTGTGTGTCTATGAAGGAGATTTGTGCAGCTTTGAAAATCTATAATCCCAGTGCACTCTATGTTAATAATATTCATGTGCTACCTAGCAAGGCTCTGAAAGTTCCTGTGGTGATGATCAATGCTCTTGTCTCAGTTTATACATTTTCCTGGGCCTGGGTCCAGATTCACAAAGTGTCTCGAGTAGGAGttgtgatctaggatcagttttgccttttaaatCGTAATGAATAATTGGAGGGTGATCTGATTCTGGATCAGCACTCGAACTCTGAGACGCTATAAGACTATGGGGCTGTTTATTGCACACAGCAGCCTGTTGAGAGAATGTCCTTCTGCCTTGTAACCAGGAGGTGTCACTAGTGAACACTCAGTCTCAGACCACCTCTCTGAGCCTTTTTGCACCTGATCTATTTACTTGAAGGCTCAATAAACAAATAACCCTCCA

Function

symbol description
parp3 Predicted to enable NAD+ ADP-ribosyltransferase activity and protein ADP-ribosylase activity. Acts upstream of or within ectodermal placode development and regulation of neural crest formation. Predicted to be located in nucleus. Predicted to be active in nucleolus and site of double-strand break. Is expressed in axis and notochord. Orthologous to human PARP3 (poly(ADP-ribose) polymerase family member 3).

NR:

description
unnamed protein product

GO:

id name namespace
GO:0090299 regulation of neural crest formation biological_process
GO:0006471 protein ADP-ribosylation biological_process
GO:0071696 ectodermal placode development biological_process
GO:0003950 NAD+ ADP-ribosyltransferase activity molecular_function

KEGG:

id description
K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036983706.1 False 3081 mRNA 0.46 11 61487933 61514684
XM_036983707.1 True 3017 mRNA 0.46 12 61488126 61514684

Neighbor

gene id symbol gene type direction distance location
LOC110528160 LOC106583186 coding upstream 17197 61385568 ~ 61470736 (+)
LOC110528159 LOC106583187 coding upstream 111696 61255912 ~ 61376237 (+)
LOC118965308 NA coding upstream 232506 61250093 ~ 61255427 (+)
LOC118965359 fancd2 coding upstream 239714 61245922 ~ 61248219 (+)
LOC110528158 LOC106583188 coding upstream 254529 61200887 ~ 61233404 (+)
LOC110528161 LOC106583185 coding downstream 672 61515356 ~ 61520408 (+)
LOC110528162 LOC106583183 coding downstream 19263 61533947 ~ 61539719 (+)
LOC110528166 NA coding downstream 185288 61699972 ~ 61707326 (+)
LOC110528992 NA coding downstream 457270 61971954 ~ 61996298 (+)
LOC110528167 LOC106583179 coding downstream 486869 62001553 ~ 62013335 (+)
G631599 NA non-coding upstream 106137 61381130 ~ 61381796 (+)
G631568 gpx1 non-coding upstream 236231 61235478 ~ 61251702 (+)
G631575 NA non-coding upstream 298131 61189385 ~ 61189802 (+)
G631573 NA non-coding upstream 299264 61188308 ~ 61188669 (+)
G632027 NA non-coding downstream 13052 61527736 ~ 61528197 (+)
G632014 NA non-coding downstream 15151 61529835 ~ 61611282 (+)
G632082 NA non-coding downstream 98390 61613074 ~ 61613299 (+)
G632096 NA non-coding downstream 109994 61624678 ~ 61625133 (+)
G632098 NA non-coding downstream 111170 61625854 ~ 61626188 (+)
G630515 uroc1 other upstream 991504 60492277 ~ 60496429 (+)
G630516 NA other upstream 1004876 60468931 ~ 60483057 (+)
G630327 NA other upstream 1339552 60147817 ~ 60148381 (+)
G632146 NA other downstream 176597 61691281 ~ 61691647 (+)
G632776 NA other downstream 624832 62139516 ~ 62139991 (+)
G632809 LOC100194703 other downstream 715831 62230515 ~ 62231349 (+)
G632817 NA other downstream 731236 62245920 ~ 62329061 (+)
LOC110528175 LOC105017014 other downstream 825337 62325429 ~ 62342019 (+)

Expression


Co-expression Network