LOC110528992


Basic Information

Item Value
gene id LOC110528992
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 61971954 ~ 61996298 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC110528992
ATGGAAACAAGCAGCCAGTCTGCCAGTGATGATGAGATAACCTGTGAGGTCATCACTGTCACTATTGGAGCAAAACACTGCTGCAGATGAATTCCAGAAGATTGGGACTGATGACACAATAAGCAAGGACCGCTGTCGAATATATTTCCAAATAACCACAGATTGCACTCTCAGGAAACAATCCCAGGTGCATAATCTGATGTCTGTGGACAACTTGTTTGTTGTGAATGAAGAGTATGACAACTATCAGTTTAAAGACTCAAAGGTGTATTTGATAGAAGCACTACCCTTTCTGTCATTGGAGGACTTGCAGAAGTTGGCCTCCAAGCTGCCATGGACCAATGCATTGAAGGTCTGGAAACTGAACACCTCTCTGAAGAAGAACAGGCGACCCCATAGACGGCCccaaggggagaggagggtgagatagAGACCAAGGCAAAGCCAACAAAGACATTGTGGAGAAGGATGCCAATGAGACTGTCACCACAGAGACCTAGAAGCTGGAGCCTGAGGTACCTACTGCAGGCCAGAGTAGTGTCAGGCAGGGAAGGCCGGGCCTCCTGACCTGGAGAACAGCACCCAGGCTGAGCAGCCGGCGGTGGAGGGGCAGGAGCACAGGGGTTAAGGTGCTGAAGTTCAGTGTGACGTGCAGGAGAAAAACACAGCTTCTCCAACGAGACTGCAAGGGACTTTGGTGGAGCCATGCAAGACTTCTTCAAGTGGAAAGCGGAGATGACCAAGTTTGATATCATTGTAAACATAACATAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC110528992 True 771 mRNA 0.49 4 61971954 61996298

Neighbor

gene id symbol gene type direction distance location
LOC110528166 NA coding upstream 264628 61699972 ~ 61707326 (+)
LOC110528162 LOC106583183 coding upstream 432235 61533947 ~ 61539719 (+)
LOC110528161 LOC106583185 coding upstream 451546 61515356 ~ 61520408 (+)
parp3 parp3 coding upstream 457270 61487933 ~ 61514684 (+)
LOC110528160 LOC106583186 coding upstream 501218 61385568 ~ 61470736 (+)
LOC110528167 LOC106583179 coding downstream 5255 62001553 ~ 62013335 (+)
LOC110528168 LOC106583178 coding downstream 28561 62024859 ~ 62135585 (+)
LOC110528171 LOC106583176 coding downstream 198357 62194655 ~ 62228018 (+)
LOC110528172 LOC106583174 coding downstream 235423 62231721 ~ 62238483 (+)
LOC110528174 LOC106583173 coding downstream 245687 62241985 ~ 62319111 (+)
G632183 NA non-coding upstream 213005 61743164 ~ 61758949 (+)
G632174 NA non-coding upstream 237005 61733583 ~ 61734949 (+)
G632165 NA non-coding upstream 250245 61721398 ~ 61721709 (+)
G632163 NA non-coding upstream 252014 61719715 ~ 61719940 (+)
G632161 NA non-coding upstream 254213 61717473 ~ 61717741 (+)
G632687 NA non-coding downstream 22311 62018609 ~ 62018898 (+)
G632689 NA non-coding downstream 24664 62020962 ~ 62021238 (+)
G632715 NA non-coding downstream 45512 62041810 ~ 62044565 (+)
G632706 NA non-coding downstream 55663 62051961 ~ 62053401 (+)
G632724 NA non-coding downstream 57504 62053802 ~ 62055232 (+)
G632146 NA other upstream 280307 61691281 ~ 61691647 (+)
G631568 gpx1 other upstream 720698 61235478 ~ 61251702 (+)
G630515 uroc1 other upstream 1475525 60492277 ~ 60496429 (+)
G630516 NA other upstream 1488897 60468931 ~ 60483057 (+)
G632776 NA other downstream 143218 62139516 ~ 62139991 (+)
G632809 LOC100194703 other downstream 234217 62230515 ~ 62231349 (+)
G632817 NA other downstream 249622 62245920 ~ 62329061 (+)
LOC110528175 LOC105017014 other downstream 343723 62325429 ~ 62342019 (+)
G633613 NA other downstream 933100 62929398 ~ 62929699 (+)

Expression


Co-expression Network