Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110528167 |
| gene name | LOC106583179 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 62001553 ~ 62013335 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| prostacyclin synthase-like |
| id | description |
|---|---|
| K01831 | PTGIS, CYP8A; prostacyclin synthase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021609994.2 | True | 1887 | mRNA | 0.50 | 10 | 62001553 | 62013335 |
61,992,000
61,994,000
61,996,000
61,998,000
62,000,000
62,002,000
62,004,000
62,006,000
62,008,000
62,010,000
62,012,000
62,014,000
62,016,000
62,018,000
NC_048571.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110528992 | NA | coding | upstream | 5255 | 61971954 ~ 61996298 (+) |
| LOC110528166 | NA | coding | upstream | 294227 | 61699972 ~ 61707326 (+) |
| LOC110528162 | LOC106583183 | coding | upstream | 461834 | 61533947 ~ 61539719 (+) |
| LOC110528161 | LOC106583185 | coding | upstream | 481145 | 61515356 ~ 61520408 (+) |
| parp3 | parp3 | coding | upstream | 486869 | 61487933 ~ 61514684 (+) |
| LOC110528168 | LOC106583178 | coding | downstream | 11524 | 62024859 ~ 62135585 (+) |
| LOC110528171 | LOC106583176 | coding | downstream | 181320 | 62194655 ~ 62228018 (+) |
| LOC110528172 | LOC106583174 | coding | downstream | 218386 | 62231721 ~ 62238483 (+) |
| LOC110528174 | LOC106583173 | coding | downstream | 228650 | 62241985 ~ 62319111 (+) |
| LOC110528175 | LOC105017014 | coding | downstream | 312094 | 62325429 ~ 62342019 (+) |
| G632277 | NA | non-coding | upstream | 12895 | 61978087 ~ 61988658 (+) |
| G632183 | NA | non-coding | upstream | 242604 | 61743164 ~ 61758949 (+) |
| G632174 | NA | non-coding | upstream | 266604 | 61733583 ~ 61734949 (+) |
| G632165 | NA | non-coding | upstream | 279844 | 61721398 ~ 61721709 (+) |
| G632163 | NA | non-coding | upstream | 281613 | 61719715 ~ 61719940 (+) |
| G632687 | NA | non-coding | downstream | 5274 | 62018609 ~ 62018898 (+) |
| G632689 | NA | non-coding | downstream | 7627 | 62020962 ~ 62021238 (+) |
| G632715 | NA | non-coding | downstream | 28475 | 62041810 ~ 62044565 (+) |
| G632706 | NA | non-coding | downstream | 38626 | 62051961 ~ 62053401 (+) |
| G632724 | NA | non-coding | downstream | 40467 | 62053802 ~ 62055232 (+) |
| G632146 | NA | other | upstream | 309906 | 61691281 ~ 61691647 (+) |
| LOC110528160 | LOC106583186 | other | upstream | 554806 | 61385568 ~ 61470736 (+) |
| G631568 | gpx1 | other | upstream | 750297 | 61235478 ~ 61251702 (+) |
| G630515 | uroc1 | other | upstream | 1505124 | 60492277 ~ 60496429 (+) |
| G630516 | NA | other | upstream | 1518496 | 60468931 ~ 60483057 (+) |
| G632776 | NA | other | downstream | 126181 | 62139516 ~ 62139991 (+) |
| G632809 | LOC100194703 | other | downstream | 217180 | 62230515 ~ 62231349 (+) |
| G632817 | NA | other | downstream | 232585 | 62245920 ~ 62329061 (+) |
| G633613 | NA | other | downstream | 916063 | 62929398 ~ 62929699 (+) |
