LOC110527134 (LOC106583149)


Basic Information

Item Value
gene id LOC110527134
gene name LOC106583149
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 62345082 ~ 62347315 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021608282.2
TGACATATCTTATGAGGAACTTCTTGATGAACTTCTGCAAGCTAATTTGTTTGGCGATAACCTTACCTCTCCAACTAATGGAGTTTTTGGGCTTATATGGCATGTACAAGCGTTTGTTTCCGCTTCTTGCTTACAATATCACTTTTTCATACAACGACAAAATGCACGAAAACAAGAGGAACCTTTTCCGAGACTTGTGTAAATTCTGCAACACGGACGGTACACTTCGACTTCTGGAGATTGGCTGCGGTAGTGGGGCCAACTTCAAATACTACCCACACGGTTGCACGGTCATTTGCACAGACCCCAACCCTCACTTTGAAAAGTACCTGCAGATGAGTATGACAGCAAGCAACCACCTGACCTATGAAAGCTTTGTGGTTGCCTCAGGAGAGGACCTGATGGCAGTGCAAAATGAGTCAGTGGATGTTGTTGTCTGCACGCTTGTGCTGTGTTCTGTCAACAACGTGCCACAGGTACTGGAAGAGGCAAGACGGATACTCCGAAAAGGTGGTGCTCTGTACTTTCTGGAGCATGTAGAGTCAGACCCCTCCTCTTGGATATACTTCTTCCAGCACATTCTCCAGCCGGTGTGGTACTACCTGGGGGACGGCTGCATGGTTACCAGGGCAACGTGGAGAGATCTGGAGGCTGCTGGGTTCTCAGAGATCCAGCTCCGACACATTGCGGCTCCGCGGGTCACTTTCATGATCAAACCACACATTCTTGGATATGCCATCAAGTGAACGTTTCATTCAACTGTTAAAgtcaaactgtattttttttaatctacaaATTTTATACTTTGACTAACTTTTCTAAAAAGATTTGGGAAATATTAAGCAACTGTGAATTAAAGTAACTTCCTGCTATTCACACCTTATTTGCCATTCAGTTTAGGAATGAATGAAATTGACTATGTTGCAGTAACAACAGAGTAGCTATAACTGTATACTACTACTCTCTACTCAGCCCACTTCGACCTTGGTGGCTTGAGGTCCCCAGTGGAGATTAGCTGTTGATTGTGGGTTTTTTATAGTGTTTTTAGCAGTCTCTTCTGTTGGAAGGTCTTGTCTTCTATAGCCAGTAGAAGATAGTGCTCCATTCTACTCTTTGTTTATGTACAGCTCTTCACTCCAATGTGAGGCCTCTGTCGATAATAGCATTTCCACCAATACAGCCATTCACTTCGCAGGTTTCCATTTCCCCATGTTTATTCGACAAAATCAatgttgtaaaaaaataataattgcgaAATGTGTCATGGAAACAGCAGATAGACAACATGTTTTATCTGTTCACCCGGGGTGGCTTTTTCTTTTGTCTAACTTTATTGCAACAAATGATGATGGAAACTCTATTTTTCTAATAAATTATGATTGCTGATTAATTTTGAAGGTACGGGGGCACATGATGTCATCGCGTAACTATAGAGCTCCACTCCACATTTGATTCTAAAAGTATACTGCTTGCAAAATAGAACAATTCTACTTTAAAAATAAGATTTCTTTGCAGGACAAGGATTGTCTTGACCTTCAAGAATGCCTGAATTGCTTCGCCTTCCTTTTCTGGTTGGTTGGtaagtttcaccatccaattatttcagatctacaggGGTGTAAGTTACGATGGTGCGGACCGTGGTGATATGTTGAATATGAAAA

Function

NR:

description
methyltransferase-like protein 7A

GO:

id name namespace
GO:0032259 methylation biological_process
GO:0008168 methyltransferase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021608282.2 True 1664 mRNA 0.42 2 62345082 62347315

Neighbor

gene id symbol gene type direction distance location
LOC110528170 LOC106565587 coding downstream 159136 62175981 ~ 62185946 (-)
LOC110528169 LOC106583177 coding downstream 169591 62159975 ~ 62175491 (-)
LOC110528991 LOC106583180 coding downstream 423943 61800678 ~ 61921139 (-)
LOC110528165 LOC106583181 coding downstream 595101 61634197 ~ 61749981 (-)
LOC110528164 LOC106583182 coding downstream 787894 61542003 ~ 61557188 (-)
LOC110528993 NA coding upstream 1787 62349102 ~ 62349904 (-)
LOC118965309 LOC106583169 coding upstream 158924 62506239 ~ 62520518 (-)
slc4a8 LOC106583168 coding upstream 191018 62538333 ~ 62589748 (-)
LOC118965401 NA coding upstream 197669 62544984 ~ 62545127 (-)
LOC110528181 LOC106583167 coding upstream 265454 62612769 ~ 62616742 (-)
G633054 LOC106583173 non-coding downstream 40389 62304243 ~ 62304693 (-)
G633006 atf7 non-coding downstream 81488 62237766 ~ 62263594 (-)
G632996 LOC106583176 non-coding downstream 116635 62223219 ~ 62228447 (-)
G632997 NA non-coding downstream 121953 62222834 ~ 62223129 (-)
G632995 NA non-coding downstream 122377 62222501 ~ 62222705 (-)
G633347 NA non-coding upstream 152175 62499490 ~ 62501459 (-)
G633346 NA non-coding upstream 156040 62503355 ~ 62504805 (-)
G633425 NA non-coding upstream 259797 62607112 ~ 62607360 (-)
G633712 NA non-coding upstream 270574 62617889 ~ 62618485 (-)
G632994 LOC106583176 other downstream 123032 62221272 ~ 62222445 (-)
G632459 NA other downstream 653438 61691248 ~ 61691644 (-)
G631687 emc3 other downstream 1145644 61198007 ~ 61199438 (-)
G631740 NA other downstream 1154037 61190708 ~ 61191045 (-)
LOC110528989 LOC106583145 other downstream 1596983 60699279 ~ 60822525 (-)
si:dkey-28n18.9 LOC106583160 other upstream 659460 62983119 ~ 63008072 (-)
LOC110528212 LOC106583293 other upstream 1438457 63785772 ~ 63827547 (-)
LOC110528216 LOC106565449 other upstream 1647201 63993536 ~ 64036771 (-)
G635167 NA other upstream 1685131 64032446 ~ 64035381 (-)

Expression


Co-expression Network