Item | Value |
---|---|
gene id | LOC110528177 |
gene name | LOC106583170 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048571.1 |
NCBI id | CM023225.2 |
chromosome length | 90918291 |
location | 62366941 ~ 62482607 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
sodium channel protein type 8 subunit alpha-like isoform X9 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_021610033.2 | False | 10250 | mRNA | 0.46 | 28 | 62366941 | 62482607 |
XM_036983720.1 | False | 10247 | mRNA | 0.46 | 28 | 62366941 | 62482607 |
XM_036983721.1 | True | 9482 | mRNA | 0.45 | 23 | 62388091 | 62482607 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110528175 | LOC105017014 | coding | upstream | 24922 | 62325429 ~ 62342019 (+) |
LOC110528174 | LOC106583173 | coding | upstream | 47830 | 62241985 ~ 62319111 (+) |
LOC110528172 | LOC106583174 | coding | upstream | 128458 | 62231721 ~ 62238483 (+) |
LOC110528171 | LOC106583176 | coding | upstream | 138923 | 62194655 ~ 62228018 (+) |
LOC110528168 | LOC106583178 | coding | upstream | 231356 | 62024859 ~ 62135585 (+) |
LOC110528183 | NA | coding | downstream | 358308 | 62840915 ~ 62843329 (+) |
LOC110528184 | NA | coding | downstream | 377942 | 62860549 ~ 62864970 (+) |
LOC110528186 | LOC106583163 | coding | downstream | 393417 | 62876024 ~ 62878348 (+) |
LOC118965310 | NA | coding | downstream | 396528 | 62879135 ~ 62881941 (+) |
LOC118965311 | NA | coding | downstream | 505874 | 62988481 ~ 63012558 (+) |
G632858 | NA | non-coding | upstream | 23210 | 62343497 ~ 62343731 (+) |
G632810 | NA | non-coding | upstream | 42856 | 62321144 ~ 62324085 (+) |
G632824 | NA | non-coding | upstream | 110695 | 62253695 ~ 62256246 (+) |
G632823 | NA | non-coding | upstream | 111291 | 62253089 ~ 62255650 (+) |
G633264 | NA | non-coding | downstream | 14875 | 62497482 ~ 62497894 (+) |
G633272 | NA | non-coding | downstream | 19866 | 62502473 ~ 62502708 (+) |
G633296 | NA | non-coding | downstream | 47353 | 62529960 ~ 62596889 (+) |
G633275 | NA | non-coding | downstream | 50615 | 62533222 ~ 62539491 (+) |
G633312 | NA | non-coding | downstream | 72447 | 62555054 ~ 62566367 (+) |
G632817 | NA | other | upstream | 37880 | 62245920 ~ 62329061 (+) |
G632809 | LOC100194703 | other | upstream | 135592 | 62230515 ~ 62231349 (+) |
G632776 | NA | other | upstream | 226950 | 62139516 ~ 62139991 (+) |
G632146 | NA | other | upstream | 675294 | 61691281 ~ 61691647 (+) |
G633613 | NA | other | downstream | 446791 | 62929398 ~ 62929699 (+) |
LOC110528206 | hoxc6 | other | downstream | 1137746 | 63619980 ~ 63622602 (+) |
LOC110528222 | LOC106583247 | other | downstream | 1713434 | 64099788 ~ 64201232 (+) |
G635332 | LOC100380681 | other | downstream | 1835593 | 64318200 ~ 64326259 (+) |
G635635 | NA | other | downstream | 2302609 | 64785216 ~ 64786393 (+) |