slc4a8 (LOC106583168)


Basic Information

Item Value
gene id slc4a8
gene name LOC106583168
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 62538333 ~ 62589748 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021610035.2
GATACATAGGCTACTTTGTTACCCCCTGAATGTGCAACTTGAAACGGGACTTTATCTTGACATCTGTTCGGTGGCAACAGCAATGCGTCGCAGTCTTTCTGCTGCCTTCTCATAATTGGCTGAACAAGCAGTGATGCTCCATCCACCGCTAACCTTGCCCTGGACCAAAGAGAGGAAAGCTTGAGGAGCGCGCGCATCAGGACGTCAAAACGCTAATAACAGAACAGGTGGAATTTGCAGCGTTTCTACGATTCTCTCTCAACTGGGAACATGTTTTCCCACACCATGTCTGTCAGAATTGGGAAGGAATGTCACCAATGAATATCTGTCAAAGAATTGACTGAAAACACCGCGAGTCTCTTGTAGCCGTCTTGGCTATCAGCTTCAGCTTCTGACTCCGTGTATAGTAGCTCACCCGTCAACTGAAAGGACGATACACGGACCCTACTATCATGCCCGCAGAAGTCAACGACCCTGAGAGCATTTTGAGCTACCAGAGGGCAGATGAGGAAGTGGTAGTGGACCAAGGAGGAACCAGCTCAGTCCTCAACATCCACTATGAGAAGGAGGAGCTAGAGGgccACAGGACTCTGTTTTTGGGGGTGAGTATGCCCATGGGTAGACAGAGCCACCGCCACCACCGCCCCCATGGCTCACGCCACCGCAAGAAGGACAGGAGGGCAGGGAATGCTACGCAGCAGgacgaggagggagagggggcctCAGCCTCTCATgACACTCCATCCCAGCGTGTCCAGTTCATTCTGGGGACAGAGGAGGATTCTGAACATGTGGCCCACGAGCTCTTCACTGAGCTGGATGAGATCTGTGTCAAAGAGGGCAAGGACGCAGAGTGGAAAGAAACTGCCAGGTGGTTGAAGTTTGAGGAGGAcgtggaggatggaggagagaggtggagtaaGCCTTATGTGGCCACGCTGTCCCTCCACAGCCTGTTTGAGCTGCGTAGCTGCCTCATCAACGGCAGTGTACTGCTGGACATGCAGGCCAACACCATCGAGGAGATCGCAGATATGGTGTTGGACCAGCAAGAGGCGTCCCATGAGCTGGACGACAGTGTGAGGCTGAAGGTAAGGGAGGCCCTGCTGAAGAGACACCACCACCAGAACGAGAAGAAGAGGTCAGGCCATCACCAGCTCATCCCTGACATGGTGCGCTCATTTGCCGATGCCGGACGCAAGCACTCTGAACCCCACATGGACAAGAGCGGTCCAACTGTCTCCCCCCAGCCTCCCCCCACCAACATAGAGGTAAAAAATGGAGCCAACCACGACAACAGCCAAGTGGACCTTAGcaaggtGGACATGCACTTCATGAAGAAGATTCCTACAGGAGCCGAGGCCTCTAACGTCCTGGTGGGAGAGCTGGACTTCCTGGAGAGACCTGTGGTGGCCTTCGTACGCCTCTCCCCTGCCGTACTGCTCACTGGCCTCACTGAGGTCCCCATACCCACCAgGTTCATGTTCATCCTCCTGGGCCCAGACGGAAAGGCTCAGCAGTACCACGAGATTGGCCGCTCCATGGCAACCATCATGACTGACGAGaTTTTCCATGATGTGGCATATAAAGCTAAGGACCGCAGTGACCTGCTGGCTGGTATAGATGAGTTTCTGGATCAGGTAACCGTTCTGCCCCCCGGGGAGTGGGACCCTTCCATCCGCATCGAGCCCCCCAAGAGTGTCCCCTCTCAGGAGAAGCGGAAAATTCCAGGGATGCCCAATGGTACGACCTGCCCTGTGGAAGAGGAGTTTCATGCAGAACATCATGGTCCTGAGCTCCAGAGAACAGGAAGATTGTTTGGGGGTCTGATCCTGGACATTAAGCGGAAGGCTCCGTTCTATCTGAGTGACTACAAAGATGGGTTGAGTCTTCAGTGTGTtgcctccttcctcttcctctactgCGCCTGCATGTCCCCAGTCATCACCTTCGGAGGCCTGCTGGGGGAGGCTACGGAGGGACGCATTAGTGCCATTGAGTCTCTGCTGGGAGCATCCATGACAGGAGTGGCCTACTCTCTGTTTGCTGGTCAGCCTCTCACCATCCTGGGTAGCACAGGCCCTGTCCTCGTCTTTGAGAAGATCCTCTTCAAGTTCTGCAAGGACTATGACCTGTCCTACCTGTCTCTGAGGACCTGTATCGGCCTGTGGACGGCCTTCCTGTGTCTCGTCCTGGTGGCCACAGATGCCAGCTCCCTGGTCTGCTACATCACCCGCTTCACAGAAGAAGCCTTTGCTTCCCTTATCTGCATCATCTTCATTTACGAGGCTCTGGAGAAGCTCATCCACCTGGGGGAACACTACCCCATCAACACCCACAGCGACCTGGACAAGCTCACCCTGGCATACTGTCGGTGTGCAGAGCCTGATAACCCCAGTAATACAACCCTGGAGCTATGGAGTCAGAAAAACATCACTGCTTCTGCTGTGCCTTGGGCCAACCTTACTGTCAAGGAGTGCATAGATCTGCAAGGCCACTTTGTGGGTACAGCTTGTGGACACCATGGCCCCTACACCCCTGACGTACTCTTCTGGTCGGCCATCCTCTTCTTCGCCACTGTCTTCATGTCAGCGTTCCTCAAAGAGTGTAAGACCAGCCGCTATTTCCCCACCAGGGTGCGGTCCATGATCAGTGACTTTGCGGTCTTTATCACCATTGTATTTATGGTCATGCTTGACTTCCTGATTGGAATCCCCTCGCAGAAGCTGCAGGTGCCCAGCAACTTTAAGCCCACCCGAGATGACCGTGGTTGGTTGATCAACCCGATAGGTCGAAACCCGTGGTGGACAGTCCTGGCTGCATCcatccctgctctgctctgcaccATCCTCATCTTCATGGACCAACAGATCACCGCTGTCATCATCAACCGCAAGGAGCATAAACTACTGAAGGGCTGTGGCTATCACCTGGACCTGCTGATGGTGGGGGTGATGCTGGCTGTGTGCTCCATTATGGGCCTGCCCTGGTTCGTGGCAGCCACCGTGCTCTCCATCTCCCACGTCAACAGCCTGAAACTGGAGTCAGAGAGCTCGGCCCCCGGGGAACAGCCCCGCTTCCTGGGCATCAGAGAGCAGAGGCTCACAGGCCTGGTCATCTTCCTACTGATGGGCCTCTCTGTCTTCATGACTGGGGCTCTGCAGTTCATTCCCATGCCTGTCCTGTATGGAGTATTTCTCTACATGGGAGCCTCATCTTTGAGGGGGATACAGTTTTTTGACCGTCTAAAGTTATTTGGTATGCCAGCCAAGCACCAGCCAGACTTCATCTACCTGAGACACGTTCCCCTGAGGAAGGTGCACCTGTTCACCATCACCCAGCTCACCTGCCTGGCCCTGCTCTGGATCATTAAAACCTCCAAGGCTGCCATTGTCTTCCCCATGATGgtTCTGGCTCTAGTGTTCATCCGTAAGTTGTTGGACCTTTGCTTCACTAAGAGGGAGCTGAGTTACCTGGATGACATAATGCCTGAGAGCAAGAAGAAACAACTGCATGACGCCTCCAAGAATGTTGACATTGAGcaggatgaGGAGATTCTGGGTACAGCAGTAGAGGATAAGACCTCAGTCCATATCCCCATGGAGAGCAGCAAGCTCCTGCAGTTCCCCAAAACACACGACCCCagGTGTGACCCTTCTGATATTAACATATCTGATGAGATGTCTAAAACCACCGTATGGAAATCCCTCAACGCCAACCAAAAGGACAGTCGCATGGGGGCTGCTAAGAAGGATTGAAATTGAAGGTCTGGAATTTATAGATCAGTGAGAGTGGAACCAGATGACTACAGAGGCTGTGAGCTACACTTCAATAAGCCAGACCCATAGGTCATAGAGCATTTCTAATGCCCCCTTGTGTTTTGGCTCATACACATCTTTAACCCAAACACCTCCTCTACAATACCGACCCCAAGACCCCAAGATTCCTAACGGCTGCTCTCAtacacccccaacacacacacattccctcaaacaaccacaaccacaacaaca
>XM_021610036.2
TGGATACATAGGCTACTTTGTTACCCCCTGAATGTGCAACTTGAAACGGGACTTTATCTTGACATCTGTTCGGTGGCAACAGCAATGCGTCGCAGTCTTTCTGCTGCCTTCTCATAATTGGCTGAACAAGCAGTGATGCTCCATCCACCGCTAACCTTGCCCTGGACCAAAGAGAGGAAAGCTTGAGGAGCGCGCGCATCAGGACGTCAAAACGCTAATAACAGAACAGGTGGAATTTGCAGCGTTTCTACGATTCTCTCTCAACTGGGAACATGTTTTCCCACACCATGTCTGTCAGAATTGGGAAGGAATGTCACCAATGAATATCTGTCAAAGAATTGACTGAAAACACCGCGAGTCTCTTGTAGCCGTCTTGGCTATCAGCTTCAGCTTCTGACTCCGTGTATAGTAGCTCACCCGTCAACTGAAAGGACGATACACGGACCCTACTATCATGCCCGCAGAAGTCAACGACCCTGAGAGCATTTTGAGCTACCAGAGGGCAGATGAGGAAGTGGTAGTGGACCAAGGAGGAACCAGCTCAGTCCTCAACATCCACTATGAGAAGGAGGAGCTAGAGGgccACAGGACTCTGTTTTTGGGGGTGAGTATGCCCATGGGTAGACAGAGCCACCGCCACCACCGCCCCCATGGCTCACGCCACCGCAAGAAGGACAGGAGGGCAGGGAATGCTACGCAGCAGgacgaggagggagagggggcctCAGCCTCTCATgACACTCCATCCCAGCGTGTCCAGTTCATTCTGGGGACAGAGGAGGATTCTGAACATGTGGCCCACGAGCTCTTCACTGAGCTGGATGAGATCTGTGTCAAAGAGGGCAAGGACGCAGAGTGGAAAGAAACTGCCAGGTGGTTGAAGTTTGAGGAGGAcgtggaggatggaggagagaggtggagtaaGCCTTATGTGGCCACGCTGTCCCTCCACAGCCTGTTTGAGCTGCGTAGCTGCCTCATCAACGGCAGTGTACTGCTGGACATGCAGGCCAACACCATCGAGGAGATCGCAGATATGGTGTTGGACCAGCAAGAGGCGTCCCATGAGCTGGACGACAGTGTGAGGCTGAAGGTAAGGGAGGCCCTGCTGAAGAGACACCACCACCAGAACGAGAAGAAGAGGTCAGGCCATCACCAGCTCATCCCTGACATGGTGCGCTCATTTGCCGATGCCGGACGCAAGCACTCTGAACCCCACATGGACAAGAGCGGTCCAACTGTCTCCCCCCAGCCTCCCCCCACCAACATAGAGGTAAAAAATGGAGCCAACCACGACAACAGCCAAGTGGACCTTAGcaaggtGGACATGCACTTCATGAAGAAGATTCCTACAGGAGCCGAGGCCTCTAACGTCCTGGTGGGAGAGCTGGACTTCCTGGAGAGACCTGTGGTGGCCTTCGTACGCCTCTCCCCTGCCGTACTGCTCACTGGCCTCACTGAGGTCCCCATACCCACCAgGTTCATGTTCATCCTCCTGGGCCCAGACGGAAAGGCTCAGCAGTACCACGAGATTGGCCGCTCCATGGCAACCATCATGACTGACGAGaTTTTCCATGATGTGGCATATAAAGCTAAGGACCGCAGTGACCTGCTGGCTGGTATAGATGAGTTTCTGGATCAGGTAACCGTTCTGCCCCCCGGGGAGTGGGACCCTTCCATCCGCATCGAGCCCCCCAAGAGTGTCCCCTCTCAGGAGAAGCGGAAAATTCCAGGGATGCCCAATGGTACGACCTGCCCTGTGGAAGAGGAGTTTCATGCAGAACATCATGGTCCTGAGCTCCAGAGAACAGGAAGATTGTTTGGGGGTCTGATCCTGGACATTAAGCGGAAGGCTCCGTTCTATCTGAGTGACTACAAAGATGGGTTGAGTCTTCAGTGTGTtgcctccttcctcttcctctactgCGCCTGCATGTCCCCAGTCATCACCTTCGGAGGCCTGCTGGGGGAGGCTACGGAGGGACGCATTAGTGCCATTGAGTCTCTGCTGGGAGCATCCATGACAGGAGTGGCCTACTCTCTGTTTGCTGGTCAGCCTCTCACCATCCTGGGTAGCACAGGCCCTGTCCTCGTCTTTGAGAAGATCCTCTTCAAGTTCTGCAAGGACTATGACCTGTCCTACCTGTCTCTGAGGACCTGTATCGGCCTGTGGACGGCCTTCCTGTGTCTCGTCCTGGTGGCCACAGATGCCAGCTCCCTGGTCTGCTACATCACCCGCTTCACAGAAGAAGCCTTTGCTTCCCTTATCTGCATCATCTTCATTTACGAGGCTCTGGAGAAGCTCATCCACCTGGGGGAACACTACCCCATCAACACCCACAGCGACCTGGACAAGCTCACCCTGGCATACTGTCGGTGTGCAGAGCCTGATAACCCCAGTAATACAACCCTGGAGCTATGGAGTCAGAAAAACATCACTGCTTCTGCTGTGCCTTGGGCCAACCTTACTGTCAAGGAGTGCATAGATCTGCAAGGCCACTTTGTGGGTACAGCTTGTGGACACCATGGCCCCTACACCCCTGACGTACTCTTCTGGTCGGCCATCCTCTTCTTCGCCACTGTCTTCATGTCAGCGTTCCTCAAAGAGTGTAAGACCAGCCGCTATTTCCCCACCAGGGTGCGGTCCATGATCAGTGACTTTGCGGTCTTTATCACCATTGTATTTATGGTCATGCTTGACTTCCTGATTGGAATCCCCTCGCAGAAGCTGCAGGTGCCCAGCAACTTTAAGCCCACCCGAGATGACCGTGGTTGGTTGATCAACCCGATAGGTCGAAACCCGTGGTGGACAGTCCTGGCTGCATCcatccctgctctgctctgcaccATCCTCATCTTCATGGACCAACAGATCACCGCTGTCATCATCAACCGCAAGGAGCATAAACTACTGAAGGGCTGTGGCTATCACCTGGACCTGCTGATGGTGGGGGTGATGCTGGCTGTGTGCTCCATTATGGGCCTGCCCTGGTTCGTGGCAGCCACCGTGCTCTCCATCTCCCACGTCAACAGCCTGAAACTGGAGTCAGAGAGCTCGGCCCCCGGGGAACAGCCCCGCTTCCTGGGCATCAGAGAGCAGAGGCTCACAGGCCTGGTCATCTTCCTACTGATGGGCCTCTCTGTCTTCATGACTGGGGCTCTGCAGTTCATTCCCATGCCTGTCCTGTATGGAGTATTTCTCTACATGGGAGCCTCATCTTTGAGGGGGATACAGTTTTTTGACCGTCTAAAGTTATTTGGTATGCCAGCCAAGCACCAGCCAGACTTCATCTACCTGAGACACGTTCCCCTGAGGAAGGTGCACCTGTTCACCATCACCCAGCTCACCTGCCTGGCCCTGCTCTGGATCATTAAAACCTCCAAGGCTGCCATTGTCTTCCCCATGATGgtTCTGGCTCTAGTGTTCATCCGTAAGTTGTTGGACCTTTGCTTCACTAAGAGGGAGCTGAGTTACCTGGATGACATAATGCCTGAGAGCAAGAAGAAACAACTGCATGACGCCTCCAAGAATGTTGACATTGAGgatgaGGAGATTCTGGGTACAGCAGTAGAGGATAAGACCTCAGTCCATATCCCCATGGAGAGCAGCAAGCTCCTGCAGTTCCCCAAAACACACGACCCCagGTGTGACCCTTCTGATATTAACATATCTGATGAGATGTCTAAAACCACCGTATGGAAATCCCTCAACGCCAACCAAAAGGACAGTCGCATGGGGGCTGCTAAGAAGGATTGAAATTGAAGGTCTGGAATTTATAGATCAGTGAGAGTGGAACCAGATGACTACAGAGGCTGTGAGCTACACTTCAATAAGCCAGACCCATAGGTCATAGAGCATTTCTAATGCCCCCTTGTGTTTTGGCTCATACACATCTTTAACCCAAACACCTCCTCTACAATACCGACCCCAAGACCCCAAGATTCCTAACGGCTGCTCTCAtacacccccaacacacacacattccctcaaacaaccacaaccacaacaaca

Function

NR:

description
electroneutral sodium bicarbonate exchanger 1-like isoform X2

GO:

id name namespace
GO:0034220 ion transmembrane transport biological_process
GO:0006820 anion transport biological_process
GO:0016021 integral component of membrane cellular_component
GO:0005452 inorganic anion exchanger activity molecular_function

KEGG:

id description
K13859 SLC4A8; solute carrier family 4 (sodium bicarbonate cotransporter), member 8

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021610035.2 False 4013 mRNA 0.54 24 62538333 62589746
XM_021610036.2 True 4012 mRNA 0.54 24 62538333 62589748

Neighbor

gene id symbol gene type direction distance location
LOC118965309 LOC106583169 coding downstream 17815 62506239 ~ 62520518 (-)
LOC110528993 NA coding downstream 188429 62349102 ~ 62349904 (-)
LOC110527134 LOC106583149 coding downstream 191018 62345082 ~ 62347315 (-)
LOC110528170 LOC106565587 coding downstream 352387 62175981 ~ 62185946 (-)
LOC110528169 LOC106583177 coding downstream 362842 62159975 ~ 62175491 (-)
LOC110528181 LOC106583167 coding upstream 23021 62612769 ~ 62616742 (-)
LOC110528182 LOC106583165 coding upstream 57234 62646982 ~ 62822425 (-)
LOC110528187 LOC106583162 coding upstream 292538 62882286 ~ 62900930 (-)
si:dkey-28n18.9 LOC106583160 coding upstream 393371 62983119 ~ 63008072 (-)
LOC110528994 LOC106583141 coding upstream 538442 63128190 ~ 63142500 (-)
G633346 NA non-coding downstream 33528 62503355 ~ 62504805 (-)
G633347 NA non-coding downstream 36874 62499490 ~ 62501459 (-)
G633054 LOC106583173 non-coding downstream 233640 62304243 ~ 62304693 (-)
G633006 atf7 non-coding downstream 274739 62237766 ~ 62263594 (-)
G633425 NA non-coding upstream 17364 62607112 ~ 62607360 (-)
G633712 NA non-coding upstream 28141 62617889 ~ 62618485 (-)
G633722 NA non-coding upstream 31184 62620932 ~ 62621508 (-)
G633711 NA non-coding upstream 32070 62621818 ~ 62622144 (-)
G633728 NA non-coding upstream 42178 62631926 ~ 62632161 (-)
G632994 LOC106583176 other downstream 316283 62221272 ~ 62222445 (-)
G632459 NA other downstream 846689 61691248 ~ 61691644 (-)
G631687 emc3 other downstream 1338895 61198007 ~ 61199438 (-)
G631740 NA other downstream 1347288 61190708 ~ 61191045 (-)
LOC110528212 LOC106583293 other upstream 1196024 63785772 ~ 63827547 (-)
LOC110528216 LOC106565449 other upstream 1404768 63993536 ~ 64036771 (-)
G635167 NA other upstream 1442698 64032446 ~ 64035381 (-)
G636055 LOC100380681 other upstream 1728446 64318194 ~ 64326230 (-)

Expression


Co-expression Network