LOC118965311


Basic Information

Item Value
gene id LOC118965311
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 62988481 ~ 63012558 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005052630.1
ctgaaatgtggcaaaaggtcgcaaagttcaagggggccgaatactttcgcaaggcactATACATTTTTCAGTGCTTGATGCATTGGTATCTTTACCCTAGATTTAATGCTCAAGCCTAAACTCAGCTGAGAGCCTACACAAAAACAAACGCAAGTCAATCATGAAGGGAATAGGTAAGCTTGGAAAAGAAACACCTTTAATAAACATGTTATGGATCATTTCCAAATGTACTTGTCAACATTTTATGCAGTCAGATGAATGTGTGAACCGATGGCCTCGGTAGATACTTAAaatactaacatactgtaaaataaaatatatactcCCCAAatgtttgccctcagaacagcctcaattcattgtgGCATGGACTACATTGTgtcaagcattccacagggatgttggcccatgttgactccaatgcttcccacagttgtgtcaagttggctttgggtggtagaccattcttgatacacatgggtttctgttgagtgtgaaaaacctcagcagtgttgcagttcttgacacaaaccggtgtgcctggtacTTACTgaaaggcacttacatattttctttcccattcaccctctgaatggcacacaaacgcAATCAATGTATCAAGGATTAAaaatcctgtctcctccccttcatctacactgatttaataagtgacatcaataagggatcatagctttcacctgggcaGTCTGTCGCGGAAAGAGCAGgcattcttaatgttttgtacacagtgtatattTATCACttggggggaaaaaagtattttgtaaacATCAAAGAAAATCCACCACTACACTTATGGCATTAACTATCTTGGTTAGGAACAACACCATGATAAACCATCTTTGGTAACACCCTTTGTAAACCAAACACAAGATAGGCTGGTGTTGACAATCCATCTTCAGGTATGAACATTCACGTGGCTATTGTAAACAATTTAAGAGCTCTTGATTCTGCATCAGTACCGGATACTTTGTCATTGCCAGCCTATATTGCTCTCACAGGCTTTAGCGGAGATTGGAAAAGAACGCG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005052630.1 True 1050 mRNA 0.41 2 62988481 63012558

Neighbor

gene id symbol gene type direction distance location
LOC118965310 NA coding upstream 106540 62879135 ~ 62881941 (+)
LOC110528186 LOC106583163 coding upstream 110133 62876024 ~ 62878348 (+)
LOC110528184 NA coding upstream 123511 62860549 ~ 62864970 (+)
LOC110528183 NA coding upstream 145152 62840915 ~ 62843329 (+)
LOC110528177 LOC106583170 coding upstream 505874 62366941 ~ 62482607 (+)
LOC110528191 LOC106565469 coding downstream 2844 63015402 ~ 63111773 (+)
LOC110528193 dtx3l coding downstream 106006 63118564 ~ 63128031 (+)
LOC110528194 LOC106583304 coding downstream 211260 63223818 ~ 63288934 (+)
LOC110528197 LOC106583300 coding downstream 359390 63371948 ~ 63446380 (+)
LOC110527135 hoxc13 coding downstream 526332 63538890 ~ 63544471 (+)
G633643 NA non-coding upstream 25629 62962406 ~ 62962852 (+)
G633626 NA non-coding upstream 39556 62948690 ~ 62948925 (+)
G633591 NA non-coding upstream 100062 62887867 ~ 62888419 (+)
G633577 NA non-coding upstream 152890 62828493 ~ 62835591 (+)
G633687 NA non-coding downstream 30552 63043110 ~ 63050216 (+)
G633700 NA non-coding downstream 116246 63128804 ~ 63129579 (+)
G633708 NA non-coding downstream 125453 63138011 ~ 63138315 (+)
G634002 NA non-coding downstream 154539 63167097 ~ 63167483 (+)
G634004 NA non-coding downstream 155236 63167794 ~ 63168001 (+)
G633613 NA other upstream 58782 62929398 ~ 62929699 (+)
LOC110528175 LOC105017014 other upstream 646516 62325429 ~ 62342019 (+)
G632817 NA other upstream 659420 62245920 ~ 62329061 (+)
G632809 LOC100194703 other upstream 757132 62230515 ~ 62231349 (+)
G632776 NA other upstream 848490 62139516 ~ 62139991 (+)
LOC110528206 hoxc6 other downstream 607795 63619980 ~ 63622602 (+)
LOC110528222 LOC106583247 other downstream 1183483 64099788 ~ 64201232 (+)
G635332 LOC100380681 other downstream 1305642 64318200 ~ 64326259 (+)
G635635 NA other downstream 1772658 64785216 ~ 64786393 (+)
G635769 NA other downstream 2039086 65051644 ~ 65052156 (+)

Expression


Co-expression Network