LOC110528237 (LOC106583271)


Basic Information

Item Value
gene id LOC110528237
gene name LOC106583271
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 64656911 ~ 64666144 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021610125.2
ATCTGGCTCATCTGTGGAAACAGCTTGCCTTTCGTTAGCTATTTAAACATCTATCTGTTGCTGATCGTTGTCCAAATATCACCATCAGGAAATTttactccaggaacagggtccaACCAAGTCCAGACAAGATGAACATGTTTGATCGGAATATACATTTTGATTCCCTTTTTAAATTTTCCCAAATcTCCCGCTCCACTCAGCTGCACCTGAAGAATGTCTACTCCAGCCTGGCCCTGTGCATGTTTGTGGCTGCAGCTGGAGCCTACGTCCACGTCATCACCAGACTATTCCAGGGTGGGCTGTTGACAATAATGGGCTCCCTGGCCATGATGGTCTGGCTGACGATGACCCCCCACTGCCCTCAGACGGAGAAGAAGAGACTGGCTATCCTCTCTGGCTTTGCCTTCTTCACAGGTGTTGGTTTGGGCCCAACCATGGATTACATCATCTCTATTAACCCTAGCATCATAGTTACAGCCTTCCTGGGGACCGCCATCATCTTTGTGTGCTTCACACTGAGTGCTCTTTACGCCCAGCGTAGGAGCTTCCTCTTCCTCTGGGGTACTCTGACATCCGGATTGTCCATCCTGCTCCTGGTCTCTTTCCTCAACATGTTCCTGGGGTCTGTCATGTTGTTCAAGgCTCACATATACCTTGGCCTGGCCATCATGTGTGGATTTGTGCTGTTTGACACTCAACTCATCATTGAGAAGGCTGAGATGGGAGACAAAGACTACATATGGCACTCTGTGGATCTCTTCTTGGACTTTGTGACTATCTTCAGGAAGCTAATGGTTATTCTGGCCATGAATGAGAAGGACAACAAGAAGAAGAAGTAAATTAAGTGGAGGAAAGATCTGTGACCTGGAATTGCATCAGGAGTGCGTCTGGTGCATTCGCCTTAACTGCTTGATCATTCTGAATTATTTAGACCCTGATATGATTTTGTTCTTTGGTATATTGTCTTCATTTTTAGGAACCGATTGGTTGCATTTGGAATTTGACTTTGTCATAAGGTTTGATGTCTTTGAGCTTTGATGTAAAGGTCTAGAAGTCCCATTTTGAAGGGACCGTGTAGTTGCTTTGAAGTAATTAACACAGACTTATTTTGATAGTTATTTTCACATTGTGTTGAGGAGacgattataattttttttattttccatgtGAACAATGCCTCAAATTATTAAAGGCCACTTTTTATATACCTACTGATAAGTACAATAACAGTTTGCATTTGTGGGACCTCTTCAGCAAATGTTAATATAATGGAAATGGATACATTTACTGCAAAGAGGATGATAATTCTGTGAATATTATCTGTTCAGTTGGGAATTCTGCCACTTAAATAACCCCCCACACCATATTCGTCTCATAACGATGACATCGCAGGATTTCAACGTTGTGATGAATGAAGAACATGAGTTCGTAGGGTGGTCATTTACATGGTTTATCATTGTTATTAGCATACCGGTATAACAAATATTGCTACTTCTATTACAGTACAAACCCTTTCTAGGACATTTATTTTATGTCTGTTAACTGATCAGAGTAATTTACTGGTTTCATTTAAGGCATTGTCTTTCTCAAAGTGAGGATGCTCTTATAtcagtatttttattttgtaGGTTGTCATTTAGGGAATGTTCTCAgagtttttttttataagatgCAAACGATTGCATTCGAGGATTTTAATCATGTTAAATATCCAGACCTGGCCCAAAGCACCTCAATCAACATAAAAAATGATTGCTATAGGAGTTGTATGGTAATTGCTGGTGGTGTTGTCCGCTATGGTGTCTAGAAAGTGATATATATTGATTGACTTGTGTTGAGGAAGTGTAATATATTTTTCCAGATATTTATTTTGTCAAGCTTGTTCTGTCTTTTCCTTACTAAAAAAAGATTCAGTGCTTGAAACGGGTGAACAGTAGAGAACCTGTGTTTCATGTGCTATGGATTTTATTTTATGTATTGaggtgaaatgaaataaataaatcccaCTCATCTTAGAGGAATGTCCAGGAGTAACAAAATTGATTTACAAGGTGCACTTACAGTTTAATTGAGAAGGTATGGCATTTCTGCCAAATTCAAACTATTCCGGTCAATTCAGTCACTGAAGCACATGGCATAGCATCCAATTACCAGTCCGAACTAGTCCTCTTCTACCCATTAATTCTGCGTCCTTGGCTAAAGGACGAGCTGTTACGAATGTTTCTTCCTTGATGTTGAGGGGAATCAAGATGCAGGGAAATTAACTGTTTCCATTCTGATATGTGTCATAGTCCTTAGGTTTTCAACATTGGTTGAATGAAATTGAACAGTCAAAGATCCTCCCTGCTAGGCTTTATTTTCTTAAAGTGCCAATAACAATACAGGTTTACCAAACTATTACTTCTCATCTGAGGATTTTACGGTTTCAAAAATTAAATAACTGCTCTCTTATACTGTGAAAACTTTTGTTTTTCCAGGAATTGCTGTTGTAAATCTGCTAAATTAATGTAAGAATAAAAACGTGTTAAAATAAA
>XM_021610124.2
ccatatttggtagtgagcggaaaacgccaaccggatgcttcacactTGTACTAACAGTGAAATATCTGGCTCATCTGTGGAAACAGCTTGCCTTTCGTTAGCTATTTAAACATCTATCTGTTGCTGATCGTTGTCCAAATATCACCATCAGGAAATTttactccaggaacagggtccaACCAAGTCCAGACAAGATGAACATGTTTGATCGGAATATACATTTTGATTCCCTTTTTAAATTTTCCCAAATcTCCCGCTCCACTCAGCTGCACCTGAAGAATGTCTACTCCAGCCTGGCCCTGTGCATGTTTGTGGCTGCAGCTGGAGCCTACGTCCACGTCATCACCAGACTATTCCAGGGTGGGCTGTTGACAATAATGGGCTCCCTGGCCATGATGGTCTGGCTGACGATGACCCCCCACTGCCCTCAGACGGAGAAGAAGAGACTGGCTATCCTCTCTGGCTTTGCCTTCTTCACAGGTGTTGGTTTGGGCCCAACCATGGATTACATCATCTCTATTAACCCTAGCATCATAGTTACAGCCTTCCTGGGGACCGCCATCATCTTTGTGTGCTTCACACTGAGTGCTCTTTACGCCCAGCGTAGGAGCTTCCTCTTCCTCTGGGGTACTCTGACATCCGGATTGTCCATCCTGCTCCTGGTCTCTTTCCTCAACATGTTCCTGGGGTCTGTCATGTTGTTCAAGgCTCACATATACCTTGGCCTGGCCATCATGTGTGGATTTGTGCTGTTTGACACTCAACTCATCATTGAGAAGGCTGAGATGGGAGACAAAGACTACATATGGCACTCTGTGGATCTCTTCTTGGACTTTGTGACTATCTTCAGGAAGCTAATGGTTATTCTGGCCATGAATGAGAAGCAGGACAACAAGAAGAAGAAGTAAATTAAGTGGAGGAAAGATCTGTGACCTGGAATTGCATCAGGAGTGCGTCTGGTGCATTCGCCTTAACTGCTTGATCATTCTGAATTATTTAGACCCTGATATGATTTTGTTCTTTGGTATATTGTCTTCATTTTTAGGAACCGATTGGTTGCATTTGGAATTTGACTTTGTCATAAGGTTTGATGTCTTTGAGCTTTGATGTAAAGGTCTAGAAGTCCCATTTTGAAGGGACCGTGTAGTTGCTTTGAAGTAATTAACACAGACTTATTTTGATAGTTATTTTCACATTGTGTTGAGGAGacgattataattttttttattttccatgtGAACAATGCCTCAAATTATTAAAGGCCACTTTTTATATACCTACTGATAAGTACAATAACAGTTTGCATTTGTGGGACCTCTTCAGCAAATGTTAATATAATGGAAATGGATACATTTACTGCAAAGAGGATGATAATTCTGTGAATATTATCTGTTCAGTTGGGAATTCTGCCACTTAAATAACCCCCCACACCATATTCGTCTCATAACGATGACATCGCAGGATTTCAACGTTGTGATGAATGAAGAACATGAGTTCGTAGGGTGGTCATTTACATGGTTTATCATTGTTATTAGCATACCGGTATAACAAATATTGCTACTTCTATTACAGTACAAACCCTTTCTAGGACATTTATTTTATGTCTGTTAACTGATCAGAGTAATTTACTGGTTTCATTTAAGGCATTGTCTTTCTCAAAGTGAGGATGCTCTTATAtcagtatttttattttgtaGGTTGTCATTTAGGGAATGTTCTCAgagtttttttttataagatgCAAACGATTGCATTCGAGGATTTTAATCATGTTAAATATCCAGACCTGGCCCAAAGCACCTCAATCAACATAAAAAATGATTGCTATAGGAGTTGTATGGTAATTGCTGGTGGTGTTGTCCGCTATGGTGTCTAGAAAGTGATATATATTGATTGACTTGTGTTGAGGAAGTGTAATATATTTTTCCAGATATTTATTTTGTCAAGCTTGTTCTGTCTTTTCCTTACTAAAAAAAGATTCAGTGCTTGAAACGGGTGAACAGTAGAGAACCTGTGTTTCATGTGCTATGGATTTTATTTTATGTATTGaggtgaaatgaaataaataaatcccaCTCATCTTAGAGGAATGTCCAGGAGTAACAAAATTGATTTACAAGGTGCACTTACAGTTTAATTGAGAAGGTATGGCATTTCTGCCAAATTCAAACTATTCCGGTCAATTCAGTCACTGAAGCACATGGCATAGCATCCAATTACCAGTCCGAACTAGTCCTCTTCTACCCATTAATTCTGCGTCCTTGGCTAAAGGACGAGCTGTTACGAATGTTTCTTCCTTGATGTTGAGGGGAATCAAGATGCAGGGAAATTAACTGTTTCCATTCTGATATGTGTCATAGTCCTTAGGTTTTCAACATTGGTTGAATGAAATTGAACAGTCAAAGATCCTCCCTGCTAGGCTTTATTTTCTTAAAGTGCCAATAACAATACAGGTTTACCAAACTATTACTTCTCATCTGAGGATTTTACGGTTTCAAAAATTAAATAACTGCTCTCTTATACTGTGAAAACTTTTGTTTTTCCAGGAATTGCTGTTGTAAATCTGCTAAATTAATGTAAGAATAAAAACGTGTTAAAATAAA

Function

NR:

description
PREDICTED: probable Bax inhibitor 1 isoform X1

GO: NA

KEGG:

id description
K21889 TMBIM6, BI1, TEGT; Bax inhibitor 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021610125.2 False 2537 mRNA 0.39 10 64656911 64666081
XM_021610124.2 True 2603 mRNA 0.39 10 64656911 64666144

Neighbor

gene id symbol gene type direction distance location
LOC110528235 LOC106583273 coding downstream 130745 64521769 ~ 64526166 (-)
LOC110528233 LOC106583275 coding downstream 167776 64449889 ~ 64489135 (-)
LOC110528226 pmel coding downstream 310651 64338852 ~ 64346260 (-)
LOC110528229 LOC105016959 coding downstream 329281 64325626 ~ 64327630 (-)
LOC110528227 LOC100380681 coding downstream 334602 64318200 ~ 64322309 (-)
LOC110528239 LOC106583268 coding upstream 3587 64669731 ~ 64689634 (-)
LOC110528240 LOC106583267 coding upstream 30364 64696508 ~ 64726237 (-)
LOC118965386 NA coding upstream 69790 64735934 ~ 64736697 (-)
slc11a2 nramp-beta coding upstream 84873 64750962 ~ 64779946 (-)
LOC110528242 LOC106583262 coding upstream 147940 64814084 ~ 64815800 (-)
G636247 LOC106583269 non-coding downstream 19362 64634534 ~ 64637549 (-)
G636278 NA non-coding downstream 39714 64616987 ~ 64617197 (-)
G636232 NA non-coding downstream 61548 64559770 ~ 64595363 (-)
G636230 NA non-coding downstream 99617 64557004 ~ 64557294 (-)
G636229 NA non-coding downstream 102613 64554099 ~ 64554298 (-)
G636321 LOC105030512 non-coding upstream 28738 64694882 ~ 64695303 (-)
G636348 NA non-coding upstream 61929 64728073 ~ 64728414 (-)
G636330 NA non-coding upstream 82169 64748313 ~ 64750884 (-)
G636358 NA non-coding upstream 90863 64757007 ~ 64757519 (-)
G636055 LOC100380681 other downstream 330681 64318194 ~ 64326230 (-)
G635167 NA other downstream 621530 64032446 ~ 64035381 (-)
LOC110528216 LOC106565449 other downstream 659672 63993536 ~ 64036771 (-)
LOC110528212 LOC106583293 other downstream 864131 63785772 ~ 63827547 (-)
G636532 LOC106583345 other upstream 468106 65134250 ~ 65134745 (-)
G636533 LOC106583345 other upstream 469394 65135538 ~ 65135795 (-)
G636571 LOC106583344 other upstream 568340 65209760 ~ 65236881 (-)
G636719 NA other upstream 827646 65493790 ~ 65495157 (-)

Expression


Co-expression Network