Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110529000 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 65360070 ~ 65362499 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: solute carrier family 12 member 5-like isoform X2 |
| id | name | namespace |
|---|---|---|
| GO:0034220 | ion transmembrane transport | biological_process |
| GO:0015698 | inorganic anion transport | biological_process |
| GO:0006812 | cation transport | biological_process |
| GO:0008324 | cation transmembrane transporter activity | molecular_function |
| GO:0015103 | inorganic anion transmembrane transporter activity | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| LOC110529000 | True | 1268 | mRNA | 0.53 | 3 | 65360070 | 65362499 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC100136780 | ssr1 | coding | downstream | 12802 | 65344022 ~ 65347268 (-) |
| LOC110528265 | LOC106583334 | coding | downstream | 17304 | 65337198 ~ 65342766 (-) |
| LOC110528264 | pol3 | coding | downstream | 32974 | 65325140 ~ 65327096 (-) |
| LOC110528263 | LOC106583335 | coding | downstream | 36763 | 65308248 ~ 65323307 (-) |
| LOC110528260 | LOC106583339 | coding | downstream | 71510 | 65277524 ~ 65288560 (-) |
| LOC118965360 | rbck1 | coding | upstream | 88674 | 65451173 ~ 65457260 (-) |
| LOC110528269 | trib3 | coding | upstream | 105237 | 65467736 ~ 65478313 (-) |
| sox12 | sox12 | coding | upstream | 224100 | 65586599 ~ 65593329 (-) |
| LOC118965313 | NA | coding | upstream | 318952 | 65681451 ~ 65687986 (-) |
| LOC110528276 | LOC106583323 | coding | upstream | 357555 | 65720054 ~ 65744788 (-) |
| G636592 | NA | non-coding | downstream | 24461 | 65330563 ~ 65335609 (-) |
| G636601 | NA | non-coding | downstream | 29862 | 65329931 ~ 65330208 (-) |
| G636594 | NA | non-coding | downstream | 30989 | 65328394 ~ 65329081 (-) |
| G636659 | NA | non-coding | upstream | 1722 | 65364221 ~ 65364425 (-) |
| G636661 | NA | non-coding | upstream | 2965 | 65365464 ~ 65365701 (-) |
| G636703 | NA | non-coding | upstream | 71226 | 65433725 ~ 65433935 (-) |
| G636704 | NA | non-coding | upstream | 73867 | 65436366 ~ 65436648 (-) |
| G636706 | NA | non-coding | upstream | 84913 | 65447412 ~ 65447620 (-) |
| G636571 | LOC106583344 | other | downstream | 123189 | 65209760 ~ 65236881 (-) |
| G636533 | LOC106583345 | other | downstream | 224275 | 65135538 ~ 65135795 (-) |
| G636532 | LOC106583345 | other | downstream | 225325 | 65134250 ~ 65134745 (-) |
| LOC110528239 | LOC106583268 | other | downstream | 688054 | 64669731 ~ 64689634 (-) |
| LOC110528235 | LOC106583273 | other | downstream | 835889 | 64521769 ~ 64526166 (-) |
| G636719 | NA | other | upstream | 131291 | 65493790 ~ 65495157 (-) |
| G637495 | NA | other | upstream | 518513 | 65881012 ~ 65882556 (-) |
| G637504 | LOC106583318 | other | upstream | 524437 | 65886936 ~ 65892402 (-) |
| G637669 | NA | other | upstream | 813461 | 66175960 ~ 66177895 (-) |
| G637722 | NA | other | upstream | 914283 | 66276782 ~ 66277080 (-) |
