LOC110529003 (LOC106583569)


Basic Information

Item Value
gene id LOC110529003
gene name LOC106583569
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 66293286 ~ 66297208 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021611154.2
CTTCTGCATAAAGAGTGCACAAACTATTCAGACTCAAACAAACCGACTAACACAACTACTGACGTatctgaggagagaagaggaaaggagaggagagaagagaagagaagagggactTTTTATGAAGACATAGTTTATATTATCGGGGGTGTCTTGACTGGACATACTCAGAAGACTCCAGATGTGTGTAGTTAGAGTCTTCTAACAATAATCTACCAGTACTGTAGTATTTGATAACAACACAGCAAAGGTCGACAGGCAGACACTATTTGTCCCACGAACGATGTTCAACAGAATGCAGGAGCATGTTCTGACAGAATGACAACTCCGTGGCTTGAAACGTCCCACTCGCTCGACTACACCCTTCCACCAGTGGTCATTCACCTTGGTAACCACACGACGACAGCATTGAATAGCAACCAGTCCTGTAGTGGTGATGACGAGATCTTTAAGTACCGAGCCTACACTGTCACCTACCTACTGGTGTTCCCTATGGCGTTTCTTAGCAACATTGGAGCGCTGTTTGTGTTCCTGCGACTGATGCCCAAACGGTCTGCGTCCTCTGTCCTCATGACCAATCTCGCCCTATCAGATGCATGCTTCTCCCTTACCCTGCCGCTGCGATTGGCCTACTACTTCAGAGGCGCTCGCTGGGACCTCCCTGATTGGCTTTGCCGACTGTGTGTGTTTTGCTTCTATCTCAACCTCTACAccagCGTTCTCTTCCTTACTGGATTGAGCGTGCTCCGTTGGCTGGCCGTGCTGAAGCCTCTCCGTCATCGAGCCTTGGCCACGCCCCTTCGTGCCTTATTGGCTTGCTTGGGCATTTGGCTGTTTGTGGGCGGCGCTTCAGTCCCATTCCTGTTTTCGGGGACCAGGGTGAGGGCGGGACTAACACGCTGCTTCGAGCCACGTAACCCTGCCTCCTGGAAGATGATCTTCATTCTCAACTACGTGGGCATGACATTCGGCTTCCTGATCCCGTTCCTCACCATCCTCGGTTGCTACGGCTGCATCATCCACCGACTGACAGCTACAATTTCGTCAGCATTAGGGTTGACTGGTAGCCTGAACAGGAACAAGATACGTAACCAGGGGAGACGTCGGCGCCGGCGCCGGTCTCTGCGTCTGGTCGCCATGGTGATCTGCACATTCCTACTGTGCTTTCTGCCCTATCACGTGGCTCGCTCACTGCACCTGCACGCGGTGGTGGGCAGGTGGGGCTGTGTTGCTACGGCGACACTGCAGCGGGTGTTGGTGGTGACGCTGTGTCTAGCGGCGGCCAACAGTGCGGTTAACCCTCTGTTGTACTACTACTCCGGGGAGTCCTTTAGAGCGGTCATACGCAGCGCCTCGTCACGACGAcggtccttctcctcctccttcactcaGGGCAGCCTGCTGCTCTCTCGCAGAAAGAAGACCACAATGCATACAACAGCAACAATGCGAGACTCACCCCTCGCTCCACCCCTAACCCTTCCTGGGTCCCTACCAGACACACCCCTCGCTCCACCCCTAGCCCTTCCTGGGTCGCTACCAGACACAAACCTCGCTCCACCCCTAACCCTTCCTGGGTCGCTACCAGACACAAACCTCGCTCCACCCCTAACCCTTCCTGGGTCGCTACCAGACAGAACCCTCGCTCCACCCCTAACCCTTCCTGGGTCCCTACCAGACACACCCCTCGCTCCACCCCTAACCCTTCCTGGGTCCCTACCAGACACACAAAGCCGTGTGGAAGACAGTCTATAAAGGGTTCAAAACCTATTTGCCCTATACCCCACCTCTACTTACAGACACTGAGACCTGAACACCTAGTTACATTCTCCAGAATCAGAGACACTTTGCTGCACATGTAAAATGGAGCCCTGAGGCCTGAaccagaaccacacacacacacacccacacggagACACTAACCTTTAGGTTTCCGAGGCACTTTGTGGGTGTGCTCTCTGTTATTTCCATTCCCGCTGCCCGGCCGGCAGCCACAGGTGCCGGGCCTACTTTTGTTTGATTGTTTATTATCCCAGTGTTAATCATTACACTCTTCATAGATGTATCATATAGGTTGAAAACAGTTTGCACAAGTCCCACAGGCTTACATTTGTAGGTTAAATGTAATAATATCTTCAGTTGATCATAGTGACTGACAATTGTTGCCTACGTAATACATATTTAGTTTTTTCCTTGACATTGAAGTAACGGATATATTTGATGCAAGGGCTTCGAATACCATATGCGTCTCATAAAAGACCTCATCCAACATCAAGAGGCTCTTGTCCAGTTTGACATTGCAAATAAAGTTAGCAGGACCATTGGAGACCAGCCAGACCTCATGCAGAGATTTGATGAAGACTGTTGGCTGAAGCCAGAGTCTGGAAAGCACTCAATCTCAAGGACATCTGAGGATATCAACCATATAGTAAGTGTGCTTCTTGATCAGGTGTGTACCTGATCAAGATTACTTTGACACCTGTCAGGTTTTACCAAAGCTTCCAGAACATCCAAATAAACCTGTTGCGCAAATTGGACTATGAGAAACTAGTGTTGTGGATCAGCAACCCCAAACTGAAATCACACTGTGAGAAGAACAAACTGTCTGCTCATTTGGCACGCAGACAGAGGCCCAAAGTTGACAGTTGATTTCAGCTGTAGTGCTGAGACCCTAGAATATAAATTGTTATCTTAAATGCCACAGTTAGAGAAGTGATGTAAGTAATGGGAAAGAATAAGTAGTACTGAAACCAATGACAATGTAGACTcacaaaatgtatatttatttttataatgttcagtggcgtgtattcatggttgccaagggaagccaggctgcCCACAAAAAATTTACCAAAAAATAAATTATTAATTTATCTTtcgtctctgtgtttcataattgtcCTTCAATTTGAAAGAAGCTGTATGTTTCTCACCCTCTGTCTttgtatgtgtaggccatctgatgctgtctggtcaaaaaagagtatgacattgttgccgcctgtAGCATTTAATGCAAGGGAGTTTatgccatgtgtaactctgtgttgttgtttttgtcgcactgctttgcctaatcttggccaggtcgctgttgtaaatgagaacttg

Function

NR:

description
cysteinyl leukotriene receptor 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021611154.2 True 3114 mRNA 0.49 3 66293286 66297208

Neighbor

gene id symbol gene type direction distance location
LOC110528298 LOC106583567 coding downstream 17653 66223587 ~ 66275633 (-)
LOC110529002 LOC104927948 coding downstream 77270 66213861 ~ 66216016 (-)
LOC110528295 LOC106583570 coding downstream 88973 66140229 ~ 66204313 (-)
LOC118965412 NA coding downstream 162969 66130189 ~ 66130317 (-)
LOC118965411 NA coding downstream 163483 66129661 ~ 66129803 (-)
LOC110528300 LOC106583565 coding upstream 757982 67055190 ~ 67079126 (-)
LOC110529006 LOC106565368 coding upstream 782075 67079283 ~ 67092617 (-)
LOC110528304 LOC106583561 coding upstream 863728 67160936 ~ 67177650 (-)
LOC110528305 LOC106565361 coding upstream 877002 67174210 ~ 67184420 (-)
LOC110528307 LOC106583559 coding upstream 917338 67144025 ~ 67237266 (-)
G637724 NA non-coding downstream 13996 66279033 ~ 66279290 (-)
G637694 NA non-coding downstream 79810 66212119 ~ 66213476 (-)
G637692 NA non-coding downstream 87921 66205127 ~ 66205365 (-)
G637690 NA non-coding downstream 92912 66199847 ~ 66200374 (-)
G637817 NA non-coding upstream 123805 66421013 ~ 66432198 (-)
G637893 NA non-coding upstream 225305 66522513 ~ 66523052 (-)
G637910 NA non-coding upstream 240510 66537718 ~ 66537921 (-)
G637916 NA non-coding upstream 243938 66541146 ~ 66541376 (-)
G637918 NA non-coding upstream 244748 66541956 ~ 66542260 (-)
G637722 NA other downstream 16206 66276782 ~ 66277080 (-)
G637669 NA other downstream 115391 66175960 ~ 66177895 (-)
G637504 LOC106583318 other downstream 400884 65886936 ~ 65892402 (-)
G637495 NA other downstream 410730 65881012 ~ 65882556 (-)
G636719 NA other downstream 798129 65493790 ~ 65495157 (-)
LOC110528308 LOC106583558 other upstream 949424 67245800 ~ 67276081 (-)
G639226 LOC106583551 other upstream 1117648 67414856 ~ 67416090 (-)
G641364 NA other upstream 2497386 68794594 ~ 68809149 (-)
G641913 NA other upstream 3510835 69808043 ~ 69811260 (-)

Expression


Co-expression Network