LOC110529006 (LOC106565368)


Basic Information

Item Value
gene id LOC110529006
gene name LOC106565368
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 67079283 ~ 67092617 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC110529006
atgGATATTCTATACAAAGTATTGAATGCAAGTGTCATCCCTGATGGACAATTTATTGACAACAAGAAGGCTTCAGAGAAGCTCCTGGGATCAATAGATGTGGACAAGAGTCAGTACAAGTTTGGGCACACTAAGGTGTTCTTCAAAGCTGGTCTTCTGGGTACTCTGGAGGATATGCGAGATGAGAAACTGTTTTTTAAATGATTATTATTAACAGAGAAGCAATTTACTCCATCCAATACAACATCCGCTCATTTATGAACGTAAAACAGTGGCCATGGATGAAGCTGTACTTCAAGATCAAGCCTCTTTTAAAATCAGCAGAAGCTGAAAAAGAGATGGCCGCAATGAAGGAAAACTTTGAGAAAATTAAGGAGGATCTGGCAAAGGCCTTGGCCAAGATAAAAGGACTAGAGGAGAAAATGGTTTCTCTTCTGCAGGAAAAATAATGACCTGCAGCTACAGATAGCATCTGAAGAGAATACTCTCTCTGGTGCTGAGGAAAGATGTGAGGGACTCATCAAGAGTAAGATCCAGATGGAAGCCAAACTCAAAGAGATTACTGAGAggttggaggatgaggaggagatcaATGCTGAGCTGACTGCCAAAGAGAGAAAATTGGAGGATGAGTGCTCTGAGCTTAAGAAAGACATTGATGACTTGGAGCTCACCTTGGCCAAagtggagaaagagaaacatgccACTGAAAATAAGGTTAAAAACATGACAGAGGAGATGTCTTCTCAAGATGAGTGCATTATCAAGTTAACCAAGGAGAAGAAAGCCCTCAAGAGGCACACCAGCAGGTCCTTAATGATCTCTAGGCAGAGGAAGACAAATTCAACACTCTGACCAAGACCAAGACCAAACTTGAACAGCAAGTGGATGATGTGAGTAAGAGATGTGACAACCAAGGTCCCCTCCGCATGGACCTTGAGAGAGCCAAGAGGAAGCTTGAAGGAGATCTGAAACTGGCCCTGGAGTCCTTGATGGACCTGGAGAATGACAAGAAGCAGTCTGATGAGAAGATCAAGAAGAAAGACTTTGAGACAAGCCAACTTCTCAGCAAAATTGAAGATGAGCAGGCATTTGGTGCTCAGCTTCAGAAGAAAATCAAATAACTCCAGGCCCGTattgaggagctggaggaggagatTGAAGCTGAACGTGCTGCTCGTGCCAAGGTTGAGAAGCAGAGGTCTGATCTCTCTAGGGAACTTGAGGAGATCAGTGAGAGACTTGAAGAGGCTGGTGGTGCAACATCTGTTCAGATTGAGATGAGCAAGAAGCGTGAGGCTGAGTTCCAGAAGCTGCGTCATGATCTTGAAGAGTCCACACTGCAGCATGAGGCCACCGCTGCTGCTCTCCGTAAGAAGCAGGCCGACACTGTGGCAGAACTGGGAGAGCAAATCGACAACCTCCAGCGTGTCAAACAGAAGTTGGAGAAGGAGAAGAGTGAATACAAAATGGAGATTGTTGACCTCTCCAGCAATATGGAAGCTATCGCCAAAGCAAAGGGTAATGTAGAAAGAATGTGCTGAACCCTTGAAGGTCAATTGAGTGAATTAAAGATAAAGAATGATGAGCATGTCCACCAACTTAATGACATAAATGTTCAGAGAGCAAGGCTTCTGACTGAGAATGGTGAACTTGGTCGTCAAATGGAGGAGAAAGAATATCTTGTTTCACAGCTGACCAGGGCTAAGCAGGCTTACACACAGCAGATTGAGGAACTCAAGAGGTATATTGAAGAGGATGTGAAGGCCAAAAATGTCCTAGCCCATGGTGTGCAGTCAGCCCAACATTACTGTGATCTGCTTCGGGAGCAGTTTGAGGAAGAGCAGGAGGCCAAGGCTGAGCTGCAGTGTGCCTTGTCCAAGGCCAACAGCGAGGTCGCTCAGTGGAGAACCAAATATGAGACTGATGCCATTCAGCGCACTGAGGAGCTTGAGGATGCCAAGAAAAAGCTTACCCAGTATCTGCAAGATGCGCAGGAAGTTGTTGAAGAAACAAACTCCTAGTGTGCTTCTCTGGAGAAGACCAAGCAAAGACTGCTGGGTGAAGTGGAGGATCTCATGATTGATGTGGAGAGAGCTAATGCTTTGGCTGCCCAGCTTGACAAGAAGCAAAGGATTTTTGACAGGGTTCTGGTCGAGTGGAAGCAGAAGTATGAGGAGGGCCAGGCAGAGCTAGAAGGGTCTCTGAAAGAGGCTCGCTCTCTCAGCACTGAACTGTTCAAGATGAAGAATTCATATGAAGAAGCTTTGGACCACCCGGAGAcactgaagagagagaacaagaacctGCAGCAGGAGATCTCTGACCTGACTGAACTGGTTGGTGAGTCTAGAAAGAGCATCCATGAACTGGATAAGGCAAAGAAGACTGTGGAGAATGAGAAGGCAGAAATCCCGGCTGCACTAGAAGAAGCAGAGGGCACACTGGCGCATGAGGAATCCAAGATTCTTCGTATACAGCTGGAGCTCAACCAGATCAAAGGGGAAGTTGACAGGAAGCTGGCGGAGAAGGATGAGGAGATAGAGCAGATCAAGAGGAACGTGATGGACTCCATGCAGAGCATTCTGGACTCTGAGATCAGGGGTAGGAATGATGCTATGAGAGTCAAGAAAAAGATGGAGGGAGACCTCAATGAGATGGAGATTCAGCTGAGCCATGCCAACCGTCAGGCTGCTGAAGCCCAAAAACAGCGGAGGAATGTCCAGGGAGCACTCAAGGATGCCCAACTGCAACTTGACGACGCCGTCCATGTCGCAGATGACATGAAGGAGCAGGTATCTATGGTGGAGCGCAGGAATAACCTAATGATGGCTGAAATTGAAGAACTGAGGGCTGCCCTGGAACAGACTGAGAGAGGCCGCAAAGTGGCGGAGCAGGAGCTGGTTGATGCCAGCGAGCGTGTAGGACTCCTGCACTCTCAGAATATCAGCCTCATCAACACTAAGAAGAAGCTGGAGGTTGACCTCACTCAGGTCCAAGATGAAATGGAAGACACCGTCCAGGAGGCAAGAAGTGCAGAGGAGAAGGCCAAGAAGGCTATTACTGATGCTGCCATGATGGCAGAGGAGTTGAAGAAGGAGCAGGACACCAGCAGTCACCtggagaggatgaagaagaacccGGAGGTCACAGTCAAGGACCTGGCACACTGCCTGGATGAGGCTGAGAACCTGGCCATGAAGGGAGGATAGAAACAACTCCAGAAACTGGAGGCTATGGTCCAAGAACTGGAGGGTGAAGTTGATGCTGAACAGAGACGTGGAGCTGAAGTCATTAAAGGTGTTCGCAAATATGAAAGAAGAGTCAAGGAGCTCATCTACCAGACTGAAGAGGAGAAGAAAAATGTGAGCAGGCTGCAGGATCTAGCTTCAGTTGGAAATGAAGGCCTACAAGAGAGCGGCTGAGGAAGCTGCCATTGGCATCGTGCAGGAGGAGATAGGGTCaaaatag

Function

NR:

description
PREDICTED: myosin heavy chain, fast skeletal muscle-like

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0016459 myosin complex cellular_component
GO:0005524 ATP binding molecular_function
GO:0003774 motor activity molecular_function
GO:0003779 actin binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC110529006 True 3471 mRNA 0.48 21 67079283 67092617

Neighbor

gene id symbol gene type direction distance location
LOC110528300 LOC106583565 coding downstream 157 67055190 ~ 67079126 (-)
LOC110529003 LOC106583569 coding downstream 782075 66293286 ~ 66297208 (-)
LOC110528298 LOC106583567 coding downstream 803650 66223587 ~ 66275633 (-)
LOC110529002 LOC104927948 coding downstream 863267 66213861 ~ 66216016 (-)
LOC110528295 LOC106583570 coding downstream 874970 66140229 ~ 66204313 (-)
LOC110528304 LOC106583561 coding upstream 68319 67160936 ~ 67177650 (-)
LOC110528305 LOC106565361 coding upstream 81593 67174210 ~ 67184420 (-)
LOC110528307 LOC106583559 coding upstream 121929 67144025 ~ 67237266 (-)
LOC110528308 LOC106583558 coding upstream 153183 67245800 ~ 67276081 (-)
LOC110528309 LOC106583557 coding upstream 193353 67285970 ~ 67332350 (-)
G639001 NA non-coding downstream 91770 66987055 ~ 66987513 (-)
G638321 NA non-coding downstream 217025 66861858 ~ 66862258 (-)
G638303 NA non-coding downstream 230854 66848149 ~ 66848429 (-)
G638258 NA non-coding downstream 282290 66796366 ~ 66796993 (-)
G638076 LOC106611080 non-coding downstream 410726 66668341 ~ 66668557 (-)
G639077 NA non-coding upstream 26778 67119395 ~ 67119748 (-)
G639088 NA non-coding upstream 42630 67135247 ~ 67135481 (-)
G639092 NA non-coding upstream 45138 67137755 ~ 67138032 (-)
G639095 NA non-coding upstream 46814 67139431 ~ 67139661 (-)
G637722 NA other downstream 802203 66276782 ~ 66277080 (-)
G637669 NA other downstream 901388 66175960 ~ 66177895 (-)
G637504 LOC106583318 other downstream 1186881 65886936 ~ 65892402 (-)
G637495 NA other downstream 1196727 65881012 ~ 65882556 (-)
G639226 LOC106583551 other upstream 322239 67414856 ~ 67416090 (-)
G641364 NA other upstream 1701977 68794594 ~ 68809149 (-)
G641913 NA other upstream 2715426 69808043 ~ 69811260 (-)
G642089 NA other upstream 2965380 70057997 ~ 70061255 (-)

Expression


Co-expression Network