Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110527140 |
| gene name | LOC106565339 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 68178856 ~ 68179755 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| somatomedin-B and thrombospondin type-1 domain-containing protein-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021608287.2 | True | 548 | mRNA | 0.48 | 2 | 68178856 | 68179755 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110528336 | LOC106583535 | coding | downstream | 119548 | 67970009 ~ 68059308 (-) |
| LOC110528335 | LOC106583536 | coding | downstream | 299296 | 67865136 ~ 67879560 (-) |
| LOC110528333 | LOC106583392 | coding | downstream | 332555 | 67833830 ~ 67846301 (-) |
| LOC110528327 | LOC106583542 | coding | downstream | 506011 | 67654547 ~ 67672845 (-) |
| LOC110528326 | LOC105026480 | coding | downstream | 584268 | 67563946 ~ 67594588 (-) |
| LOC110528338 | stau1 | coding | upstream | 19180 | 68198935 ~ 68206574 (-) |
| LOC110528340 | LOC106583529 | coding | upstream | 27077 | 68206832 ~ 68221519 (-) |
| LOC110528343 | c209d | coding | upstream | 142789 | 68322544 ~ 68329223 (-) |
| LOC110528345 | LOC100380688 | coding | upstream | 621271 | 68801026 ~ 68978163 (-) |
| LOC110528347 | LOC106583526 | coding | upstream | 845075 | 69024830 ~ 69029850 (-) |
| G639885 | NA | non-coding | downstream | 1446 | 68176201 ~ 68177410 (-) |
| G639880 | NA | non-coding | downstream | 16551 | 68161860 ~ 68162305 (-) |
| G639877 | NA | non-coding | downstream | 21236 | 68157395 ~ 68157620 (-) |
| G639863 | NA | non-coding | downstream | 46131 | 68132447 ~ 68132725 (-) |
| G639826 | NA | non-coding | downstream | 93758 | 68081864 ~ 68085098 (-) |
| G639899 | NA | non-coding | upstream | 44377 | 68224132 ~ 68224411 (-) |
| G639902 | NA | non-coding | upstream | 48338 | 68228093 ~ 68228447 (-) |
| G639903 | NA | non-coding | upstream | 48870 | 68228625 ~ 68228834 (-) |
| G639904 | NA | non-coding | upstream | 49912 | 68229667 ~ 68229873 (-) |
| G639905 | NA | non-coding | upstream | 50972 | 68230727 ~ 68231015 (-) |
| G639226 | LOC106583551 | other | downstream | 762766 | 67414856 ~ 67416090 (-) |
| LOC110528308 | LOC106583558 | other | downstream | 903316 | 67245800 ~ 67276081 (-) |
| LOC110528300 | LOC106583565 | other | downstream | 1099797 | 67055190 ~ 67079126 (-) |
| G637722 | NA | other | downstream | 1901776 | 66276782 ~ 66277080 (-) |
| G637669 | NA | other | downstream | 2000961 | 66175960 ~ 66177895 (-) |
| G641364 | NA | other | upstream | 614839 | 68794594 ~ 68809149 (-) |
| G641913 | NA | other | upstream | 1628288 | 69808043 ~ 69811260 (-) |
| G642089 | NA | other | upstream | 1878242 | 70057997 ~ 70061255 (-) |
| G643054 | NA | other | upstream | 2075590 | 70255345 ~ 70258882 (-) |
| G643159 | NA | other | upstream | 2227278 | 70407033 ~ 70408118 (-) |
