gnrh2 (gon2)


Basic Information

Item Value
gene id gnrh2
gene name gon2
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 73207930 ~ 73210424 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021610547.2
ttgaggaggaagatgaggcttCAGAGATGTCATCAGAAAGCAGCTCTACAACACTCATCGTCGCCTTGGGAAAGGGATTTGACACTGAGTTGCTGTATACCAACAGGTTTGAAAGTAATAGAAGTGAGCAGCGCACATAGACTGACTTGGTGGACATCAACAGTGATAACCGATTCCATACAACAAGTATTATCAGACTGAGGATCTAAGCTCCAGTGATGGTGAGTGTGGCTAGGCTGGTGTTGATGCTGGGGCTGCTGCTGTGTCTGGGAGCCCAGCTGTCCTTCTCCCAACACTGGTCCCATGGCTGGTACCCAGGAGGCAAGCGGGAACTGGACTCATTTACCACCTCTGAGatttcAGAGGAGATTAAACTCTGTGAGGCAGGAGAATGCAGCTACCTGAGACCACAGCGAAGGAACATCCTTAGGGACATTCTTTTGGATGCCCTGGCCAGAGAATTCGAGAAGATAAAGTAACCTTACAACTGAAGCTGACTTAAATCCTTCCTTGTCTATCTGTTTATTTCAAATAACCGCTATTCTAATCTTATGTCCTTTGATCCAATTTGATGGTTTATCAATTTTGATAATATGTCACATCCCTCCTTTACCCTTGCACCCCCTTTATTGTCCCTTTGGACTCAATTACAGATGTAGCATCATGCACAAGCCATTTCCTGTAATAAAGTATCTATTTTGTTATTAATGTCTT
>TU733633
GGACATAAattgaggaggaagatgaggcttCAGAGATGTCATCAGAAAGCAGCTCTACAACACTCATCGTCGCCTTGGGAAAGGGATTTGACACTGAGTTGCTGTATACCAACAGGTTTGAAAGTAATAGAAGTGAGCAGCGCACATAGACTGACTTGGTGGACATCAACAGTGATAACCGATTCCATACAACAAGTATTATCAGACTGAGGATCTAAGCTCCAGTGATGGTGAGTGTGGCTAGGCTGGTGTTGATGCTGGGGCTGCTGCTGTGTCTGGGAGCCCAGCTGTCCTTCTCCCAACACTGGTCCCATGGCTGGTACCCAGGAGGCAAGCGGGAACTGGACTCATTTACCACCTCTGAGatttcAGAGGAGATTAAACTCTGTGAGGCAGGAGAATGCAGCTACCTGAGACCACAGCGAAGGAACATCCTTAGGGACATTCTTTTGGATGCCCTGGCCAGAGAATTCGAGAAGATAAAGTAACCTTACAACTGAAGCTGACTTAAATCCTTCCTTGTCTATCTGTTTATTTCAAATAACCGCTATTCTAATCTTATGTCCTTTGATCCAATTTGATGGTTTATCAATTTTGATAATATGTCACATCCCTCCTTTACCCTTGCACCCCCTTTATTGTCCCTTTGGACTCAATTACAGATGTAGCATCATGCACAAGCCATTTCCTGTA

Function

NR:

description
progonadoliberin-2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021610547.2 False 714 mRNA 0.44 4 73207930 73210415
TU733633 True 693 TUCP 0.45 4 73207960 73210424

Neighbor

gene id symbol gene type direction distance location
zmat1 LOC106583414 coding downstream 934 73197136 ~ 73206996 (-)
LOC110528460 NA coding downstream 43698 73163029 ~ 73164232 (-)
pcsk1 LOC106583415 coding downstream 163103 73020932 ~ 73044827 (-)
ell2 LOC106583416 coding downstream 207220 72965547 ~ 73000710 (-)
nudt2 nudt2 coding downstream 308503 72894975 ~ 72899427 (-)
LOC110528463 LOC106583412 coding upstream 6851 73217266 ~ 73287242 (-)
LOC110528465 NA coding upstream 77889 73288304 ~ 73299941 (-)
LOC110527146 NA coding upstream 357369 73567784 ~ 73575603 (-)
LOC110528467 LOC106583411 coding upstream 407177 73617592 ~ 73620522 (-)
LOC110528466 LOC106583410 coding upstream 412978 73623393 ~ 73630300 (-)
G645362 NA non-coding downstream 46728 73159725 ~ 73161202 (-)
G645364 NA non-coding downstream 53975 73148685 ~ 73153955 (-)
G645366 NA non-coding downstream 61162 73131526 ~ 73146768 (-)
G645405 NA non-coding upstream 6160 73216575 ~ 73217235 (-)
G645431 NA non-coding upstream 64339 73274754 ~ 73275053 (-)
G645436 NA non-coding upstream 68612 73279027 ~ 73279356 (-)
G645438 NA non-coding upstream 70655 73281070 ~ 73281368 (-)
G645156 NA other downstream 489481 72717746 ~ 72718449 (-)
G645145 NA other downstream 504208 72700709 ~ 72703722 (-)
G644738 LOC106583443 other downstream 1141807 72044221 ~ 72073477 (-)
G643823 NA other downstream 1449120 71756919 ~ 71758810 (-)
LOC110528404 LOC106583471 other downstream 1929150 71274346 ~ 71278978 (-)
G645928 NA other upstream 484158 73694573 ~ 73694925 (-)
G646073 NA other upstream 600487 73810902 ~ 73811457 (-)
LOC110528488 NA other upstream 1896482 75106897 ~ 75107924 (-)
G649025 NA other upstream 2408910 75619325 ~ 75623983 (-)
G649327 LOC106583642 other upstream 3004286 76214701 ~ 76220931 (-)
G645368 NA non-coding downstream 62589 73141945 ~ 73145371 (-)
G645365 NA non-coding downstream 64826 73132457 ~ 73143134 (-)

Expression


Co-expression Network