LOC110528480 (LOC106583597)


Basic Information

Item Value
gene id LOC110528480
gene name LOC106583597
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 74788801 ~ 74813362 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036984457.1
TCCCCATATATTTTAATTGGTTATTCAAATGATTGACTTGCGTCTTCTTCCATTCATAGAATCGTGTGTGCATGCGCCTGAGGTAGGAAGTGTCACTTAATACTTTTTCGGAAACTCTGTCTGCCAGTCCCAGACCATGAACTACGTGGGGCAGCTGGCGGAGACTGTGTTTGTGACGGTCAAAGAACTATACCGGGGCCTCAACCCAGCCACGCTTACGGGGGCCATCGACGTCATCGTGGTGCGTCAGCCCGACGGCAGCCTCCAGTGCTCTCCGTTCCATGTGCGCTTTGGCAAGCTGGGGGTGCTGCGCTCCAAGGAGAAAGTGGTGGACATAGAGATCAATGGGGAGCCAGTTCACCTGCAAATGAAACTGGGGGACAATGGAGAAGCTTTTTTTGTGGAGGAAAATGAGGATTTTGAGtCCAGAGTGCCAGCCCACCTCTGCACGTCGCCCATCCACATGGAGCTGCTGGAGGTGGCCGAGGAAACCTTAGAGGGGCTCCCCAGTTCCGGAAGCACACGAAGGAAAAAGAGGCGGCGAGTACGCATTCGCTCCGACTCCCACCTAAGAGAAGATGGTAGCTCCTCGTCTGacgagagggaaagggagagagcgagggagcagTCAGGAGAACAGGAGAGCCACTCCAAAGAAGAGCCCAGCACGCCGATGCTTGCCAGTAAGTCTGTGTACTTCTCGCTGTCAGAGGAGCCGCATGAAGAGTTGGTGGCCGTGCAGACCAGGGACGTCCACCCTCACTCTGATGGAGAGTGGTCCCCCTCAGAGAGTGTGTTCTATAGTCGTTCTTCCTCCCCCAAGAGTGACTCTGAGCTGCTGGTGAAGCCTCCGGAGTCTTCAGGTCTTCCGATGCAGTGGAACTGGGGCGGCTTTCCCGAGATGTGTccaacggagagagggagggtggaggtgcAGCATGTCTCTGCTGGCATCCACTGCTCGGACAGCTCCCACTTCCGCACCATCCAGCGGCAGGACTCCTTCGACGTTATCAATATGTGTccaacggagagagggagggtggaggtgcAGCATGTCTCTGCTGGCATCCACTGCTCGGACAGCTCCCACTTCCGCACCATCCAGCGGCAGGACTCCTTCGACATGGGCTTGGAGCCCGGGGTCCGCTTTGTCCGAGAGAGCAGTAGCGTCACGGTGGTGGTCAGGCCCACGCCCAGGACCGGACCAGCGGTCCAACCCACAGAAAGTTCACGCATAGACCTGGAGAGAGCCTCCAATATGACCCACTCCACCCCGAATCACCACACCTCAGAGCTTCTCTCAGAACCGCTAACATTGGCATCGTTAGCGATGGCTAGCATAGAATCGCCCCAAGCCCCAGGGCCTAGAAAAACAAAAATGCAGCCACAAGTAGAGACCCAGCAGGCAGGGGATGAAGTAGCCGAGGAGTCCCCATCCAACCCGGAGCTGGAAGACTCCAGAAACTCCCTGGCTAACACAATTAGTATGGCTAATGTAGACAACACTGATAGACAAGCTAGCGAAGAAAGCTCAGCACATGTTGAATGTGTAGCTAACAACATGGTTAGCCAAGTTGAAAACGACTGTATAGACACACATATCCCATCCATCCAAGGTAGCAAAGCTGGCACAATCAGCGCAGACAGGCTAGCTAGCGACAGCACAGCTGCTTTAGATAACAAGGCTAGTTTGGCTAACACAACTAGCTATGCCAGTGCAGCCAACTTAGGTCTCATTACCACAGAGTATCTGGGTAGCAGAGCACAATCAGAACAGCACAGTGCCTTTCCAGAACCCAATGGACAAGGGCCAGAAGTTGTCTTGAGTGAGGGTGACAGCGGGATTGAGCCCTGCACCGAGGGAGGGGAGAACACAGAGAACGGCTCTGTAATGATGGACATAGCCACAGACGGCTCCCTGACCAATCAGGCTGCAGAGAGTGTCGGAGTGACAGACCTGTTGGCCACTGAGGCTCTGGGGGAGGAGCAGTCTAGCTCAGCAGAGCACCAGGACAAGAAGAAAGGTAAACGCAGTCAGCACCTTGGACCCTCTGACATCTACCTGGATGACTTGTCTAACCTGGACCCAGAGGTGGCAGCTCTCTACTTCCCACCTAAAAGTGAGGCAGAAGGATGCTCGCAGCTCAGTGCGGAGCAAGGGTCCGGTTCTGGTAACCAGTCTCCCCAGTCGGTGGGCAGTGGGGCCATGGACAGCGGCACAGAGTACCTGTCTGACTCTACCACCGACCACATGGACGTTAGCATGTCCCTCTGCGGCCACACCGGCCACACCAGTCAAATcaacaaagATCAGTTTATGGAGCACGTTGTGAACTACCAGGATTTGGTGAGCAACCCTGGAATCATTGAAGATCCAAACCTGGTTATCTGCATCAACTCAAAGTATTATAACTGGGCAGTGGCTGCCCCTATGGTCCTGTCAATGCAAGTTTTTCAAAAGAATATACCAAAGAGTGCCATTGACCAGCTGGTGAAGGACAAGATGCCCAAAAAGTCTGGCCGCTGGTGGTTCTCCTGGAGGAGGAAGGACATGGACACTAACTCAAACCAGACTGGAGAGAACTCTAAGCAGGACCAAGAGGAGGCACAGACCAAGAATGATGTCTCAACCTCTGTGTCTGGTCCCTCAACAACCATACTGGCGACTCTGGATGACCTGACTAGTGACGAGGAGGCGGGCCTAGGCAGAGTGGGCAACCTATCATCAGAGACCATAAACACTGCCCAGTGTTTTAGCCAAATGTACCGCAAGTCCCTACGCCTCACCTCCGAACAGATAGAGCGGTTGAACCTGCGTGAGGGGGCCAACAAGGTTATGTTCAGCGTAACCACTCAGTACCAGGGCACCTGTCGCTGCGAAGCCGCCATCTACCTGTGGAACTGGGACGACCACGTCGTCATCTCAGACATTGATGGCACCATCacaaaGTCTGATGCCCTGGGTCATATCCTACCTCAGCTGGGGAAAGACTGGACACACCACGGCATTGCCCGTCTCTACCACAAAATCCACCAAAACGGATACAAGTTCCTCTACTGTTCGGCGCGGGCCATCGGCATGGCTGACATCACCAAGGGCTACCTGCAGTGGGTGAACGACAAAGGCACCGTCCTCCCCAAGGGCCCCGTGCTGCTGGCCCCCAGCAGTTTCTTCTCTGCCCTGcacagagaggtggtagagaaGAAGCCGGAGGTGTTCAAGATTGCCTGCCTCACCGACATCCGAGACCTGTTCAACCCCCAGAGGAAGCCCTTCTATGCAGCCTTTGGCAACAGGACCAATGATGCCAATGCTTATAAGGAAGTGGGTGTCCCTGACACCAGGATCTTCACTGTGAACCCCAAGGGAGAGCTCATTCAGGAGAAGAACAAAGGGAGCAAGTCCTCgTACACTCACCTGAGCGAGCTGGTGGAGCACTTCTTCCCTATGATCTCTGAGGATGGGAGGTCGTCCTCCTTCGACTGCCCCGAGTTCAGCCACTTCTCCTACTGGAGAGAGCCCCTACCACCACTGGACCTGTCTACTCtggattagacacacacacaaacacacacacacacacacactcgccacGTGACCTGTCCACTCTGAAttagacacacatacaccactGGACCTGTCCATTCTGGATTAGACACACACTCGCCACTGGACCTGTCCACTCTgaattagacacacacacacacacactcgccacTGGACCTGTTCACTCtggattagacacacacacactcacctctgGATTAGACACACACACTCGCCACTGGACCTGTCCACTCTGgattagtcacacacacacacacactcgccacTGGACCTGTTCACTCtggattagacacacacacactcacctctgGATTAGACACACACACTCGCCACTGGACCTGTCCACTCTGgattagtcacacacacacacactcgccacTGGACCTGTCCTCTCTGCATTAGACACACACTCGCCACTGGACCTGTCCACTCtggattagacacacacacacacacactcgctcgcCACTGGACCTGTCCACTCcggattagacacacacacagacactcgcTTGCCACTGGACCTGTCCACTCtggattagacacacacacacacacacacacacacacactcgccacTGGACCTGTCCACTCtggattagacacacacacacacacacacactcgccacTGGACCTGTCCACTCtggattagacacacacacactcgccacTGGACCTGTCCTCTCtggattagacacacacacactcgcctctggattagacacacacacactcgccacTGGACCTGTCCTCTCTGGATTAGACACAGATTAAGGCAGCCTTCCGCACCTCTCTGTTTCAGaggtgttgggttaaatgcattAGACACATTTCAGTAGAAGCCTTTCAGTTGTACTACTGACTAGACAACTGTACAACTGACTGGTtttcctttctccttctctctcatcacccctttTTCCCCTCTTTCGATCCCTTTGAGTTCCGAAATATTTTTAATTGATAAGCCAGGAATATTGTAGATGTGCAAGGTTCTCATTTAATATACTCTGTTTTATGTTGATTCATCTGATGCAATTGAAAACTAAAGTTTCTGGCGTTCAGCTAAATGTACACATGCACAGATGACACTGCATTTTACGCAACACTATATACTTCATATTGTGCAATACTTGATTGCAAAAAGACATACTGCACTGGCCATACCATATTGCCATTATCCAAATGATACTGGCGCAATGTGCATTTGTGCTGCTCAAGAATTCCAGTTACATTTTAGTTGTTTAGCACAGGGTTTTCCAAACTTTGACTCAGGCCCACCTTTCCAGTATTTGGGAACATCCCAAATACATTCCAGGGTTGAGTAAATTGACTGTTTGGGTAATTGAAATGGCCATGGTCTGGTCTGAAACGGTGCCTTTTTGCTTATGATTTATATGCTTTCATATTTAAAGGGGTACTTAGGGATTTTATCTACTTCACGAgggtcagatgaactcatggatacaatTTGTATCTCTCTGCGTACAGTtcgaaggaagttgctaactagcacaCGTAGTCAGTTGACTGGATATCTATTGGTATCTGCTACCACTTCGACTTCcaagtcattgtgctaatgcaaGTTAGTattggctcacaaaactacctctaacttccttcatactggagacaggagctgtgttcgaatacccatactacatacttaatgagtatatactattaGTTAATTTTAGTATACTTACTGTAAACGTCCTTTCAGTTGAGCGTGAGCGTACTAGCGCTTCCCGTCTACCGGAAGTTTtttgctgttgctatgcaacttcttgctagcataacaaattactagcaAGACAGTTTACGAGTAAATTCAATATGGAGTGCCCGAGTGCGCTctgagcgttgtcagattgtcctttcataaattcagagcgtttcaatCTGAGCTTCAGAACGCACACTGGATACTGGCCCGTTCTGTCCACACAAGGGCAttcaagctaacttgctagctacttccagacacaaatgaaagaacacctcactctgaccatttactCGCCCAAGCAGAGCTGGttttccagagcgttggtgactgctgCTGGAAACAATCTAATTatgccttttttttttgttgccgaTGTTCACTGTCAGTGGCTATATTCAACTGGGGTTTGAGCGttagtaaattcatcagttattctgcgctctgccACATGtgcactcagacgagagtgctctggaATCaaagtagatagccagagcgaatttgtgaacgcacaatgactataccacttagctaaaCTAAGAATAACGGGAGTAATCAAGTCACTAAtcgttgggtagttagttagatagcatatAGTAAATATTCTGGCAAGttcgatgtattagtagccaactaaccttagatagctagctaacatactggtacatagtgctgtaatgatatgctatgcgctttgtaaggatggtgtagctaacaaattgtcagccaaggTAACTTAGTTGAAAAGTAATTTTATTACATTTCTCATTTTCTTGAAcgtttgtcataattagttaaaccAATGCATTTGTATCCGCTCTCGGACTTCGGCTGcttattttcttcaaatctgaaaacgttgAAGTCACGCCTATTTTCTGAATTACATTATAGGCCCTTAAGCACGGAAAGagtgtccactgcttgtatacttcgtattttgACATatagtattcgaacacagctataGACATGGTATCTACGAGTTCACCGGATTCTTAAGAAGTAGATAAATGGCCTCATCGGCATTTTggcaaagtatccctttaattatatttagaaatatatatatttttgtcatcCTAAGTGATACCAATTACTCTGTTTAGAGAGACATTGCATTGGACCCGAAGATCCTTGTTGTTATTTTCAAATGATCTACACTGAAgaaaatataaacacaaaatgtaaagtgttggtcccatgtttcatgagctgaaataaaatatcccagaaatgttc

Function

NR:

description
phosphatidate phosphatase LPIN2-like isoform X1

GO: NA

KEGG:

id description
K15728 LPIN; phosphatidate phosphatase LPIN

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036984457.1 True 6547 mRNA 0.49 20 74788801 74813362

Neighbor

gene id symbol gene type direction distance location
trim107 LOC106583598 coding downstream 1424 74777397 ~ 74787377 (-)
LOC110528477 LOC107582337 coding downstream 18580 74758711 ~ 74770221 (-)
LOC118965317 NA coding downstream 35167 74748533 ~ 74753634 (-)
LOC110527147 NA coding downstream 184612 74602280 ~ 74604189 (-)
LOC110528476 LOC106583586 coding downstream 187691 74212515 ~ 74601110 (-)
LOC110528482 LOC106583600 coding upstream 16337 74829699 ~ 74837226 (-)
LOC110528483 LOC106583601 coding upstream 32114 74845476 ~ 75055731 (-)
LOC110528488 NA coding upstream 293651 75106897 ~ 75107924 (-)
LOC110528489 LOC106583603 coding upstream 463419 75276781 ~ 75314879 (-)
LOC110527148 LOC106583596 coding upstream 578342 75391704 ~ 75392659 (-)
G647489 NA non-coding downstream 17334 74771144 ~ 74771467 (-)
G647481 NA non-coding downstream 48105 74740492 ~ 74740696 (-)
G647099 NA non-coding downstream 160689 74627902 ~ 74628112 (-)
G647004 NA non-coding downstream 333113 74453584 ~ 74455688 (-)
G646987 NA non-coding downstream 360517 74427640 ~ 74428284 (-)
G647499 NA non-coding upstream 1178 74814540 ~ 74814755 (-)
G647500 NA non-coding upstream 1403 74814765 ~ 74815027 (-)
G647460 LOC106565219 non-coding upstream 11649 74825011 ~ 74827149 (-)
G647463 NA non-coding upstream 24625 74837987 ~ 74840905 (-)
G647534 NA non-coding upstream 79593 74892955 ~ 74937768 (-)
G646073 NA other downstream 977344 73810902 ~ 73811457 (-)
G645928 NA other downstream 1093876 73694573 ~ 73694925 (-)
gnrh2 gon2 other downstream 1578377 73207930 ~ 73210424 (-)
G645156 NA other downstream 2070352 72717746 ~ 72718449 (-)
G645145 NA other downstream 2085079 72700709 ~ 72703722 (-)
G649025 NA other upstream 805963 75619325 ~ 75623983 (-)
G649327 LOC106583642 other upstream 1401339 76214701 ~ 76220931 (-)
G649684 LOC100136508 other upstream 2200066 77009249 ~ 77016601 (-)
LOC110529034 LOC106583646 other upstream 2569305 77380754 ~ 77390369 (-)

Expression


Co-expression Network