Item | Value |
---|---|
gene id | LOC110528522 |
gene name | LOC106583626 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048571.1 |
NCBI id | CM023225.2 |
chromosome length | 90918291 |
location | 77072817 ~ 77086911 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
casein kinase II subunit alpha-like |
id | description |
---|---|
K03097 | CSNK2A; casein kinase II subunit alpha |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_021610636.2 | False | 2728 | mRNA | 0.47 | 13 | 77072817 | 77086911 |
XM_021610632.2 | False | 2863 | mRNA | 0.48 | 13 | 77072847 | 77086911 |
XM_021610633.2 | False | 2722 | mRNA | 0.47 | 13 | 77072848 | 77086911 |
XM_021610634.2 | True | 2731 | mRNA | 0.48 | 13 | 77072954 | 77086911 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110528521 | LOC106583627 | coding | upstream | 20101 | 77051068 ~ 77052716 (+) |
LOC110528520 | LOC106583628 | coding | upstream | 27805 | 77040538 ~ 77045012 (+) |
LOC110528519 | LOC100136508 | coding | upstream | 56199 | 77008450 ~ 77016618 (+) |
LOC110528514 | LOC106565251 | coding | upstream | 332832 | 76667990 ~ 76739985 (+) |
LOC110528510 | LOC106583636 | coding | upstream | 617864 | 76440836 ~ 76454953 (+) |
LOC110528525 | tp53rk | coding | downstream | 5128 | 77092039 ~ 77096836 (+) |
LOC110528524 | NA | coding | downstream | 9964 | 77096875 ~ 77104732 (+) |
LOC110528530 | p2ry1 | coding | downstream | 81657 | 77168568 ~ 77170381 (+) |
LOC110528535 | LOC106565270 | coding | downstream | 201160 | 77288071 ~ 77307101 (+) |
LOC110528534 | LOC106583651 | coding | downstream | 220910 | 77307821 ~ 77344086 (+) |
G648901 | NA | non-coding | upstream | 49727 | 77022823 ~ 77023090 (+) |
G648900 | NA | non-coding | upstream | 50484 | 77022083 ~ 77022333 (+) |
G648847 | NA | non-coding | upstream | 54934 | 76992874 ~ 77017883 (+) |
G648881 | NA | non-coding | upstream | 93736 | 76978784 ~ 76979081 (+) |
G648931 | LOC106583622 | non-coding | downstream | 34755 | 77121666 ~ 77124356 (+) |
G648961 | LOC106583623 | non-coding | downstream | 54683 | 77141594 ~ 77142684 (+) |
G649805 | NA | non-coding | downstream | 61787 | 77148698 ~ 77148902 (+) |
G649814 | NA | non-coding | downstream | 71726 | 77158637 ~ 77158843 (+) |
G649821 | NA | non-coding | downstream | 78258 | 77165169 ~ 77165378 (+) |
G648736 | LOC106583631 | other | upstream | 319496 | 76752757 ~ 76753321 (+) |
G648117 | NA | other | upstream | 1605573 | 75466904 ~ 75467244 (+) |
G647784 | NA | other | upstream | 1832711 | 75239553 ~ 75240106 (+) |
LOC110529029 | LOC106583587 | other | upstream | 3066107 | 73999447 ~ 74009019 (+) |
G646257 | NA | other | upstream | 3133466 | 73938610 ~ 73939351 (+) |
G649909 | LOC106583646 | other | downstream | 295175 | 77382086 ~ 77382391 (+) |
G650094 | NA | other | downstream | 386301 | 77473212 ~ 77474249 (+) |
G650282 | NA | other | downstream | 567027 | 77653938 ~ 77657252 (+) |
G650261 | NA | other | downstream | 744089 | 77831000 ~ 77833061 (+) |
G650827 | NA | other | downstream | 1020495 | 78107406 ~ 78109402 (+) |