LOC118965366 (LOC106565264)



Basic Information


Item Value
gene id LOC118965366
gene name LOC106565264
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 77088808 ~ 77090373 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>LOC118965366
ATGAATGCCTAGTTCCAGCTCACCTGTGTCCAGCAGGAGGCGGTGGTCAGTACCCTTCTGATTGGGGCCTTGCAGGCTTCCCTGGTCGGCGGGTGGCTGATTGACCGCTATGGCCGAAGGAATTCCATCATCCTCAGCAACGTCCTTATCCTGGCAGGGAGTCTGGTCCTGGTTAGCACCTCTTACTTAGCGCTGGTGGTGGGAAGAATCACAGTGGGCTTCGCCATATGCATCTCCTCCATGTcctgctgtgtctttgtgttgGAGATGGTCACCGACAagcatatgttttttttttgggacCCAACGAAGTCGGTATCACCGTGGGCATTCTGGGAGCTTATGCCATGAACTATATCCTGTCTGATACCAGACATGGATGGAAATATCTGTTTGGGTCAGCCATCGTGCTGACTTTGGCTCAGTTTGTCTCCATTTGGTTCCTCCCGTCCAATGCTGGAGCACATGCAGAATGCCAAAGGGCAGGCGCTCAAAGCCAAAGAGGCCTTATTCGCTTCATTGAGGATCACGAAGTAGAGAATTCAGCAACCGTTTCCAACAGACTTGATAACGCACGGTACAGCATTGTGCACCTCTTACAACGGCTGGATAACATGAGGATCATGACTATGATAGGGCTGGGCTTGGTCATCTTTCATCAGTTCACCGGTCTGCCCAACGTGCTCTTCTACAGCTCAACCGTCTTTCATTCAGTGGGCTTTGAGAGTAATGCCTCAGCAGTGCTGGCATCCGTGGGCATGGAGGTAGTCAAAGTGATCGCCACCTTGGTCTCCATGGTGTTTGCCAATAGGGTTGGCAGGAGGCCTCTCTGCTCATCGGTGGATGTAcagtaatgtctgtgtgtttgatcACCATAGGACTTCTGAGCAGGCGTTTGGTGGTCAACACCAAGACACCCTGTAGTGCTGGGGATAATGTTTTCACAGATGAAAATGCTAATAAAGCACAAACGTTTTTAAAAGGTATACAGCCATCCTACTAACTTTCAAATCTGCATGAAAAATAATTAGCGTTTTCTATTTAATCCAAGAGACATCGTACACAGGGGTCAGGAAGCTGAAGCTCCTGAGCAGATGGGGTTTAAATACTCATTCTTGGCAATCTCAGTTAATCAGTCATTCAATGTTGTTAAACTTGCACATTCACTAGAATTCTAAACAGGGCACATTCTGCACTACATTATAAAACTCTGAAATTGTCgttat

Function


NR:

description
PREDICTED: solute carrier family 2, facilitated glucose transporter member 10-like

GO:

id name namespace
GO:0048731 system development biological_process
GO:0006810 transport biological_process
GO:0016020 membrane cellular_component
GO:0022857 transmembrane transporter activity molecular_function

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
LOC118965366 True 1226 mRNA 0.48 2 77088808 77090373

Neighbor


gene id symbol gene type direction distance location
LOC110528518 NA coding downstream 81665 77006314 ~ 77007143 (-)
LOC110529031 LOC106583629 coding downstream 109653 76793582 ~ 76979155 (-)
LOC110528515 LOC106583630 coding downstream 295659 76739000 ~ 76793149 (-)
LOC110528513 LOC106583633 coding downstream 429193 76608462 ~ 76659615 (-)
LOC110528512 LOC106583634 coding downstream 480761 76470081 ~ 76608047 (-)
LOC110528526 NA coding upstream 15768 77106141 ~ 77111927 (-)
si:ch73-267c23.10 LOC106583622 coding upstream 31238 77121611 ~ 77145722 (-)
LOC110528532 fndc11 coding upstream 97290 77187663 ~ 77197139 (-)
LOC110529033 LOC106583621 coding upstream 127687 77218060 ~ 77231065 (-)
helz2a helz2 coding upstream 159579 77249952 ~ 77275885 (-)
G649762 NA non-coding downstream 10109 77077732 ~ 77078699 (-)
G649752 NA non-coding downstream 29237 77059371 ~ 77059571 (-)
G649739 NA non-coding downstream 35070 77036979 ~ 77053738 (-)
G649736 NA non-coding downstream 57985 77030354 ~ 77030823 (-)
G649684 LOC100136508 non-coding downstream 72207 77009249 ~ 77016601 (-)
G649783 NA non-coding upstream 24796 77115169 ~ 77116250 (-)
G649806 NA non-coding upstream 58106 77148479 ~ 77148736 (-)
G649808 NA non-coding upstream 59016 77149389 ~ 77149609 (-)
G649810 LOC107756720 non-coding upstream 61049 77151422 ~ 77152847 (-)
G649815 NA non-coding upstream 68053 77158426 ~ 77158650 (-)
G649327 LOC106583642 other downstream 867877 76214701 ~ 76220931 (-)
G649025 NA other downstream 1467871 75619325 ~ 75623983 (-)
LOC110528488 NA other downstream 1980892 75106897 ~ 75107924 (-)
G646073 NA other downstream 3277351 73810902 ~ 73811457 (-)
LOC110529034 LOC106583646 other upstream 292294 77380754 ~ 77390369 (-)
G650755 cbfa2t2 other upstream 938871 78029244 ~ 78029753 (-)
G650763 NA other upstream 952926 78043299 ~ 78046469 (-)
eya2 LOC106583664 other upstream 1185775 78209092 ~ 78312601 (-)
G652578 ncoa5 other upstream 2363702 79454075 ~ 79457103 (-)

Expression



Co-expression Network