LOC110528526


Basic Information

Item Value
gene id LOC110528526
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 77106141 ~ 77111927 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC110528526
atgagcttggaggCACTTTACACTTATTTTAGGATCCACCCCAGTAAACATAATTTGCCTAATGATGCGCGAGTGGAGAAGGACCATCTAATTTCAAGCAAGCGCATTTCCATACACATTCACTTTCCTCGCCTACTCTCCTCGATTAACTTGgacctttttcaaaaggaggcgAGAGAGGACGCAGAAGAACTGCAGATTTTCCTGCTGGGATCTAGATTAGCTGGGAAGAGTTCAGCAGGAAACACCATCCTCGGCAGAGATGAGTTTGACCTGAGGAGAGCTGCTCAGTGTGTGAAGAGACGGAGAGACGTTGCAGGGAGGCAGGTCACTGTGGTCGACACTCCAGGCTGGTGGGGAAATTACCCTGTAGTGTCCACTCCTGAGCTGGTTAAACAGGAGATTGTGCTCAGTGTGTCAGTGTCCCCCATGACCACACACTCTCCTCCCGGTCATACGGGGGGGATGATTAATtcacagaggaacacagagaagCAGTAGAggaccacctggagcttctcggTGAGAGAGTCTGGAGTCACACTATAGCGCCTTTCACATATGGGAAAAGACTGGGACAAACGACCATTGAGCAGCATATTCAGAGAGAAGGGAAGGCCCTTCAGGGGCTTGTTGAGAAATGTGATAACAGGTATCATGTCCTTAACACTAAGAACAGGGGAGATGTCACAGCGCTGCTGGAGAAGATAGAGAAGATGGTGACAGTAAACAGAGGCCTTTATAAGCTAAAGAGAGGGATAGTAGAAAAGATTGAAGACAGAAGGAAAGCAGAGGATGAGGGAGTGAAACGAAGACTGATGACGGTGcagcaacagagagagatcaTTGTGATACTAATGGGGATGTTTATCTGAAATTAATGACATTTGTCAATTTTTGCACATTTTATAGTTATTTAGCTGAAAAACTTACCTATTTTGCTCTGTGTCACAATATACTATAATTTCTGTCACAGAGCTAAGGCATATGCCttacaacatactgtatgtctcatgTACATGGCAACAGTCAATGGAATATCAATTTAGCAGTTTATTCCGAACAACGGCCATTTCATTCCTATAGTCATGTATGTCATCACCTAAAAAAGTCTGTGTTCTATCTCTCTGCCAGGTGACTCCGTCCATCTCTCAGTGCTGAGGATTGTGCTGCTCGGGGCTAGATTATCTGGGAAGAGTTCAGCAGGTAACACCATCCTGGGCAGAAAGGAGTGCCTGAGGGTAGCTGCTCGGTGCTCAAAAGTAGCACCGAGCAGTGGTCGACACTCCAGGCTGGTGGGGAAATCTCCACATAGAGTTCACTCCTAGAATGGTTCAACAGGAGATTATGCACAGTGTGGGTCAGTGTGTCCCAGGACCCCACACTCTCCTCCTGGTCATACGGGGGGGATGTTTAATTcactgagaaagaaagaaagaaagacaataGAGGAACACCTGGAGCTTCTCAGTGAGACAGTCTGGAGTCACACTATAGTGCTGTTCACCTATGGGACTGTCTGGGAAACACAGCCATTGAACAGCACATTGAAAGTGAGGGGAAGGCCCTCCAGTGGCTTGTTGAGAAATGTAGAAACGGGCATCATGTTCTAAACAATGTCAACGAGGATGATAGCACTCAGGTCACAGAGCTGCTGGAGATGATAGAAGAGATGGTGGCAGgaaacagtggagatgtgtttCCTGATCAGATCAAACAATCTGCACCAATCAGGAAAGCTGACAGTATGACGTGGCTTCCTCCAAACATGAGTGGAGATGACAGATCAGAGAACAGAGATCAGAGAACTCAGAGAACCTCTGCATATGGCTCCCTGAGCTCCATAGCTGAATCCGAGATAAGCTCAGGATCCACTGGAGGAAATGGATGACTGATGATGCTGACAACCAGAGAACtatcagtggcttcttcctaaCATGAATGAAGATGACAGATCTCGTAGACAGTCTCTGGGAAGCTGTCAAAATAATTCTATGAGTTTCATAACTGAGACTGAGACCAGCTCAATATCCAGAGGAAAATACAGGGGTCTGGAACAATCTGCATCAATCAGGAAAGCTGACAGTATGAAGTGGCTTCCGCCAAACAGTAAGAAGTATTCTGACTAGAATGTAGTACAGGGGTCCATGCAGAGGATAGTTCTGGTAATCtgacattttcttaacatttatACAATCTATCCAAAATGTATTGAGCAAGAAAATGATATTTTTTATGTTTAGTTTATAACCATTGTGATTAGGTTGATCAACATTGGTTCTCATTTTGCTTAATTTGGCTAAATATCTCCCTATTGGATTTCTAGAAAAACATTCCTTTGTCTGATCTTCCCCATTTTAATTTTGCTCCACTTTCTGGTCTGCTTCCTGTCTTTCAGTTTGGTGTAGGTTTTTCTTTTGATTGCCTCTTCTGCAAATTTAGTGGgtgctcatggtgggtgtcttaggttccagttgttgttgctagtcaactttcagtggacacccccatgagtctttcagaacccctcctaaaatagtggtggaaa

Function

NR:

description
PREDICTED: GTPase IMAP family member 8-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC110528526 True 2548 mRNA 0.45 5 77106141 77111927

Neighbor

gene id symbol gene type direction distance location
LOC118965366 LOC106565264 coding downstream 15768 77088808 ~ 77090373 (-)
LOC110528518 NA coding downstream 98998 77006314 ~ 77007143 (-)
LOC110529031 LOC106583629 coding downstream 126986 76793582 ~ 76979155 (-)
LOC110528515 LOC106583630 coding downstream 312992 76739000 ~ 76793149 (-)
LOC110528513 LOC106583633 coding downstream 446526 76608462 ~ 76659615 (-)
si:ch73-267c23.10 LOC106583622 coding upstream 9684 77121611 ~ 77145722 (-)
LOC110528532 fndc11 coding upstream 75736 77187663 ~ 77197139 (-)
LOC110529033 LOC106583621 coding upstream 106133 77218060 ~ 77231065 (-)
helz2a helz2 coding upstream 138025 77249952 ~ 77275885 (-)
LOC118965318 NA coding upstream 189533 77301460 ~ 77304319 (-)
G649762 NA non-coding downstream 27442 77077732 ~ 77078699 (-)
G649752 NA non-coding downstream 46570 77059371 ~ 77059571 (-)
G649739 NA non-coding downstream 52403 77036979 ~ 77053738 (-)
G649736 NA non-coding downstream 75318 77030354 ~ 77030823 (-)
G649684 LOC100136508 non-coding downstream 89540 77009249 ~ 77016601 (-)
G649783 NA non-coding upstream 3242 77115169 ~ 77116250 (-)
G649806 NA non-coding upstream 36552 77148479 ~ 77148736 (-)
G649808 NA non-coding upstream 37462 77149389 ~ 77149609 (-)
G649810 LOC107756720 non-coding upstream 39495 77151422 ~ 77152847 (-)
G649815 NA non-coding upstream 46499 77158426 ~ 77158650 (-)
G649327 LOC106583642 other downstream 885210 76214701 ~ 76220931 (-)
G649025 NA other downstream 1485204 75619325 ~ 75623983 (-)
LOC110528488 NA other downstream 1998225 75106897 ~ 75107924 (-)
G646073 NA other downstream 3294684 73810902 ~ 73811457 (-)
LOC110529034 LOC106583646 other upstream 270740 77380754 ~ 77390369 (-)
G650755 cbfa2t2 other upstream 917317 78029244 ~ 78029753 (-)
G650763 NA other upstream 931372 78043299 ~ 78046469 (-)
eya2 LOC106583664 other upstream 1164221 78209092 ~ 78312601 (-)
G652578 ncoa5 other upstream 2342148 79454075 ~ 79457103 (-)

Expression


Co-expression Network